Result of FASTA (ccds) for
pFN21AE1531
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1531, 400 aa
1>>>pF1KE1531 400 - 400 aa - 400 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3653+/-0.000868; mu= 15.8704+/- 0.052
mean_var=64.5030+/-12.859, 0's: 0 Z-trim(105.7): 55 B-trim: 0 in 0/49
Lambda= 0.159692
statistics sampled from 8507 (8562) to 8507 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.263), width: 16
Scan time: 2.370
The best scores are: opt bits E(32554)
CCDS35191.1 CSF2RA gene_id:1438|Hs108|chrX ( 400) 2724 636.6 1.2e-182
CCDS35191.1 CSF2RA gene_id:1438|Hs108|chrY ( 400) 2724 636.6 1.2e-182
CCDS55360.1 CSF2RA gene_id:1438|Hs108|chrX ( 410) 2563 599.5 1.9e-171
CCDS55360.1 CSF2RA gene_id:1438|Hs108|chrY ( 410) 2563 599.5 1.9e-171
CCDS35192.1 CSF2RA gene_id:1438|Hs108|chrY ( 333) 2173 509.6 1.7e-144
CCDS35192.1 CSF2RA gene_id:1438|Hs108|chrX ( 333) 2173 509.6 1.7e-144
CCDS55359.1 CSF2RA gene_id:1438|Hs108|chrX ( 434) 2173 509.6 2.2e-144
CCDS55359.1 CSF2RA gene_id:1438|Hs108|chrY ( 434) 2173 509.6 2.2e-144
CCDS35190.1 CSF2RA gene_id:1438|Hs108|chrX ( 377) 2161 506.8 1.3e-143
CCDS35190.1 CSF2RA gene_id:1438|Hs108|chrY ( 377) 2161 506.8 1.3e-143
CCDS55361.1 CSF2RA gene_id:1438|Hs108|chrX ( 267) 1824 429.1 2.3e-120
CCDS55361.1 CSF2RA gene_id:1438|Hs108|chrY ( 267) 1824 429.1 2.3e-120
CCDS35193.1 CSF2RA gene_id:1438|Hs108|chrX ( 233) 1470 347.5 7.3e-96
CCDS35193.1 CSF2RA gene_id:1438|Hs108|chrY ( 233) 1470 347.5 7.3e-96
CCDS14113.1 IL3RA gene_id:3563|Hs108|chrY ( 378) 590 144.9 1.2e-34
CCDS14113.1 IL3RA gene_id:3563|Hs108|chrX ( 378) 590 144.9 1.2e-34
CCDS59158.1 IL3RA gene_id:3563|Hs108|chrY ( 300) 498 123.7 2.3e-28
CCDS59158.1 IL3RA gene_id:3563|Hs108|chrX ( 300) 498 123.7 2.3e-28
CCDS2559.1 IL5RA gene_id:3568|Hs108|chr3 ( 420) 353 90.3 3.5e-18
CCDS58813.1 IL5RA gene_id:3568|Hs108|chr3 ( 378) 318 82.2 8.6e-16
CCDS46739.1 IL5RA gene_id:3568|Hs108|chr3 ( 333) 288 75.3 9.3e-14
CCDS2560.1 IL5RA gene_id:3568|Hs108|chr3 ( 335) 288 75.3 9.4e-14
>>CCDS35191.1 CSF2RA gene_id:1438|Hs108|chrX (400 aa)
initn: 2724 init1: 2724 opt: 2724 Z-score: 3392.3 bits: 636.6 E(32554): 1.2e-182
Smith-Waterman score: 2724; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
310 320 330 340 350 360
370 380 390 400
pF1KE1 QIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
::::::::::::::::::::::::::::::::::::::::
CCDS35 QIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
370 380 390 400
>>CCDS35191.1 CSF2RA gene_id:1438|Hs108|chrY (400 aa)
initn: 2724 init1: 2724 opt: 2724 Z-score: 3392.3 bits: 636.6 E(32554): 1.2e-182
Smith-Waterman score: 2724; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
310 320 330 340 350 360
370 380 390 400
pF1KE1 QIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
::::::::::::::::::::::::::::::::::::::::
CCDS35 QIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
370 380 390 400
>>CCDS55360.1 CSF2RA gene_id:1438|Hs108|chrX (410 aa)
initn: 2563 init1: 2563 opt: 2563 Z-score: 3191.7 bits: 599.5 E(32554): 1.9e-171
Smith-Waterman score: 2563; 99.7% identity (100.0% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
310 320 330 340 350 360
370 380 390 400
pF1KE1 QIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
:::::::::::::::.
CCDS55 QIKDKLNDNHEVEDEMGPQRHHRCGWNLYPTPGPSPGSGSSPRLGSESSL
370 380 390 400 410
>>CCDS55360.1 CSF2RA gene_id:1438|Hs108|chrY (410 aa)
initn: 2563 init1: 2563 opt: 2563 Z-score: 3191.7 bits: 599.5 E(32554): 1.9e-171
Smith-Waterman score: 2563; 99.7% identity (100.0% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
310 320 330 340 350 360
370 380 390 400
pF1KE1 QIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
:::::::::::::::.
CCDS55 QIKDKLNDNHEVEDEMGPQRHHRCGWNLYPTPGPSPGSGSSPRLGSESSL
370 380 390 400 410
>>CCDS35192.1 CSF2RA gene_id:1438|Hs108|chrY (333 aa)
initn: 2173 init1: 2173 opt: 2173 Z-score: 2707.5 bits: 509.6 E(32554): 1.7e-144
Smith-Waterman score: 2173; 100.0% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
:::::::::::::::::
CCDS35 VRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
310 320 330
>>CCDS35192.1 CSF2RA gene_id:1438|Hs108|chrX (333 aa)
initn: 2173 init1: 2173 opt: 2173 Z-score: 2707.5 bits: 509.6 E(32554): 1.7e-144
Smith-Waterman score: 2173; 100.0% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
:::::::::::::::::
CCDS35 VRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
310 320 330
>>CCDS55359.1 CSF2RA gene_id:1438|Hs108|chrX (434 aa)
initn: 2173 init1: 2173 opt: 2173 Z-score: 2705.7 bits: 509.6 E(32554): 2.2e-144
Smith-Waterman score: 2636; 92.1% identity (92.1% similar) in 432 aa overlap (1-398:1-432)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320
pF1KE1 VRILNWSSWSEAIEFGS----------------------------------DDGNLGSVY
::::::::::::::::: :::::::::
CCDS55 VRILNWSSWSEAIEFGSHSVTQAGVQWHNLGSLQPPSPRLKRFSCLRLPGSDDGNLGSVY
310 320 330 340 350 360
330 340 350 360 370 380
pF1KE1 IYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEG
370 380 390 400 410 420
390 400
pF1KE1 KGYREEVLTVKEIT
::::::::::::
CCDS55 KGYREEVLTVKEIT
430
>>CCDS55359.1 CSF2RA gene_id:1438|Hs108|chrY (434 aa)
initn: 2173 init1: 2173 opt: 2173 Z-score: 2705.7 bits: 509.6 E(32554): 2.2e-144
Smith-Waterman score: 2636; 92.1% identity (92.1% similar) in 432 aa overlap (1-398:1-432)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320
pF1KE1 VRILNWSSWSEAIEFGS----------------------------------DDGNLGSVY
::::::::::::::::: :::::::::
CCDS55 VRILNWSSWSEAIEFGSHSVTQAGVQWHNLGSLQPPSPRLKRFSCLRLPGSDDGNLGSVY
310 320 330 340 350 360
330 340 350 360 370 380
pF1KE1 IYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEG
370 380 390 400 410 420
390 400
pF1KE1 KGYREEVLTVKEIT
::::::::::::
CCDS55 KGYREEVLTVKEIT
430
>>CCDS35190.1 CSF2RA gene_id:1438|Hs108|chrX (377 aa)
initn: 2160 init1: 2160 opt: 2161 Z-score: 2691.7 bits: 506.8 E(32554): 1.3e-143
Smith-Waterman score: 2161; 98.8% identity (98.8% similar) in 320 aa overlap (1-320:1-320)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
::::::::::::::: :
CCDS35 VRILNWSSWSEAIEFDHLGGIHPRGRERLPRRGLDREGNYLRPRGCRNGMDISASATRGN
310 320 330 340 350 360
>>CCDS35190.1 CSF2RA gene_id:1438|Hs108|chrY (377 aa)
initn: 2160 init1: 2160 opt: 2161 Z-score: 2691.7 bits: 506.8 E(32554): 1.3e-143
Smith-Waterman score: 2161; 98.8% identity (98.8% similar) in 320 aa overlap (1-320:1-320)
10 20 30 40 50 60
pF1KE1 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 FLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVP
::::::::::::::: :
CCDS35 VRILNWSSWSEAIEFDHLGGIHPRGRERLPRRGLDREGNYLRPRGCRNGMDISASATRGN
310 320 330 340 350 360
400 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:38:22 2016 done: Mon Nov 7 02:38:23 2016
Total Scan time: 2.370 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]