Result of FASTA (ccds) for
pFN21AE1527
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1527, 217 aa
1>>>pF1KE1527 217 - 217 aa - 217 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2366+/-0.000644; mu= 16.6491+/- 0.039
mean_var=93.8177+/-18.253, 0's: 0 Z-trim(113.9): 50 B-trim: 45 in 1/50
Lambda= 0.132413
statistics sampled from 14454 (14504) to 14454 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.446), width: 16
Scan time: 2.240
The best scores are: opt bits E(32554)
CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 1523 299.9 8.1e-82
CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 850 171.4 4.4e-43
CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 850 171.4 4.8e-43
CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 850 171.6 6.1e-43
CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 799 161.6 3.4e-40
CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 421 89.3 1.7e-18
CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 421 89.3 1.8e-18
CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 404 86.1 1.6e-17
CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 404 86.1 1.7e-17
CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 404 86.3 2.3e-17
CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 401 85.6 2.6e-17
CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 396 84.5 4.1e-17
CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 398 85.0 4.2e-17
CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 388 82.9 1.2e-16
CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 387 82.9 1.6e-16
CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 385 82.7 2.9e-16
CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 382 81.9 3.2e-16
CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 385 82.9 4.1e-16
CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 385 83.0 4.5e-16
CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 385 83.1 6.1e-16
CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 385 83.3 7.3e-16
CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 358 77.3 7e-15
CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 349 75.9 4.3e-14
CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 349 76.0 4.4e-14
CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 349 76.0 4.5e-14
CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 342 74.2 5.9e-14
CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 343 74.8 1e-13
CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 342 74.6 1.1e-13
CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 341 74.4 1.2e-13
CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 341 74.5 1.3e-13
CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 334 73.3 4.2e-13
CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 334 73.3 4.2e-13
CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 330 72.3 5.3e-13
CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 330 72.3 5.6e-13
CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 330 72.4 5.7e-13
CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 326 71.7 1.1e-12
CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 322 71.0 2.3e-12
CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376) 322 71.3 3.4e-12
CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447) 322 71.3 3.5e-12
CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 311 68.3 3.5e-12
CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 307 67.5 5.7e-12
>>CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 (217 aa)
initn: 1523 init1: 1523 opt: 1523 Z-score: 1582.4 bits: 299.9 E(32554): 8.1e-82
Smith-Waterman score: 1523; 100.0% identity (100.0% similar) in 217 aa overlap (1-217:1-217)
10 20 30 40 50 60
pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSRNPCCLCWCCCCSCSWNQERRRAWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSRNPCCLCWCCCCSCSWNQERRRAWQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 ASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKMQEPSAHTFDDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKMQEPSAHTFDDA
130 140 150 160 170 180
190 200 210
pF1KE1 QLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
:::::::::::::::::::::::::::::::::::::
CCDS13 QLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
190 200 210
>>CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 (241 aa)
initn: 831 init1: 688 opt: 850 Z-score: 887.0 bits: 171.4 E(32554): 4.4e-43
Smith-Waterman score: 850; 62.4% identity (78.6% similar) in 210 aa overlap (14-217:38-241)
10 20 30 40
pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSR--NPCCL
: : : . .. :.: :: : ::.
CCDS61 EPAGASSPAGRVDGGLQMGSERMEMRKRQMPAAQDTPGAAPGQ----PGAGSRGSNACCF
10 20 30 40 50 60
50 60 70 80 90
pF1KE1 CWCCCCSCS----WNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHS
::::::::: ::: .: ::.: . ::. : .:. :::..::::::::: .
CCDS61 CWCCCCSCSCLTVRNQEDQRPTIASHELR-ADLPTWEESPAPTLEEVNAWAQSFDKLMVT
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 PAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL
::::..:: :::::.::::::::.:::::: :::.....::::.:::::.::::::::::
CCDS61 PAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE1 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
:::::: ::..: ::: : ::::::::::::::::::::..: .:. :: :. :..: ::
CCDS61 DSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLL-QSLSEKSIEA
190 200 210 220 230 240
>>CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 (273 aa)
initn: 831 init1: 688 opt: 850 Z-score: 886.3 bits: 171.4 E(32554): 4.8e-43
Smith-Waterman score: 850; 62.4% identity (78.6% similar) in 210 aa overlap (14-217:70-273)
10 20 30 40
pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSR--NPCCL
: : : . .. :.: :: : ::.
CCDS69 QITENEGDLRAVPDIKQMGSERMEMRKRQMPAAQDTPGAAPGQ----PGAGSRGSNACCF
40 50 60 70 80 90
50 60 70 80 90
pF1KE1 CWCCCCSCS----WNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHS
::::::::: ::: .: ::.: . ::. : .:. :::..::::::::: .
CCDS69 CWCCCCSCSCLTVRNQEDQRPTIASHELR-ADLPTWEESPAPTLEEVNAWAQSFDKLMVT
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE1 PAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL
::::..:: :::::.::::::::.:::::: :::.....::::.:::::.::::::::::
CCDS69 PAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSL
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE1 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
:::::: ::..: ::: : ::::::::::::::::::::..: .:. :: :. :..: ::
CCDS69 DSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLL-QSLSEKSIEA
220 230 240 250 260 270
>>CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 (388 aa)
initn: 831 init1: 688 opt: 850 Z-score: 884.4 bits: 171.6 E(32554): 6.1e-43
Smith-Waterman score: 850; 62.4% identity (78.6% similar) in 210 aa overlap (14-217:185-388)
10 20 30 40
pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSR--NPCCL
: : : . .. :.: :: : ::.
CCDS61 KPREEDATAGQSSPMPQMGSERMEMRKRQMPAAQDTPGAAPGQ----PGAGSRGSNACCF
160 170 180 190 200 210
50 60 70 80 90
pF1KE1 CWCCCCSCS----WNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHS
::::::::: ::: .: ::.: . ::. : .:. :::..::::::::: .
CCDS61 CWCCCCSCSCLTVRNQEDQRPTIASHELR-ADLPTWEESPAPTLEEVNAWAQSFDKLMVT
220 230 240 250 260
100 110 120 130 140 150
pF1KE1 PAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL
::::..:: :::::.::::::::.:::::: :::.....::::.:::::.::::::::::
CCDS61 PAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSL
270 280 290 300 310 320
160 170 180 190 200 210
pF1KE1 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
:::::: ::..: ::: : ::::::::::::::::::::..: .:. :: :. :..: ::
CCDS61 DSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLL-QSLSEKSIEA
330 340 350 360 370 380
>>CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 (210 aa)
initn: 719 init1: 719 opt: 799 Z-score: 835.1 bits: 161.6 E(32554): 3.4e-40
Smith-Waterman score: 803; 56.6% identity (80.5% similar) in 205 aa overlap (25-217:7-210)
10 20 30 40 50
pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPA---APSR----NPCCLCWCCCCSCS---
:.. ..:: ::. : ::.:::::::::
CCDS52 MRKRQQSQNEGTPAVSQAPGNQRPNNTCCFCWCCCCSCSCLT
10 20 30 40
60 70 80 90 100
pF1KE1 -WNQER-RRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFL
:.:: . : . .. .:.. . : : .:. ::: ::.:.:::.:..::::..:: ::
CCDS52 VRNEERGENAGRPTHTTKMESIQVLEECQNPTAEEVLSWSQNFDKMMKAPAGRNLFREFL
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE1 RTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKK
::::::::.:::::::.:: : :..:..::::.:::::.:::::::::::::::: ::..
CCDS52 RTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEVSLDSRVREVINRN
110 120 130 140 150 160
170 180 190 200 210
pF1KE1 MQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
. .:. : ..::::::::::::::.::::.: :.... .. . ::::.
CCDS52 LLDPNPHMYEDAQLQIYTLMHRDSFPRFLNSQIYKSFV-ESTAGSSSES
170 180 190 200 210
>>CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 (180 aa)
initn: 433 init1: 417 opt: 421 Z-score: 445.7 bits: 89.3 E(32554): 1.7e-18
Smith-Waterman score: 421; 47.4% identity (73.3% similar) in 135 aa overlap (80-214:46-180)
50 60 70 80 90 100
pF1KE1 SWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLR
: ::. ::.::: :. : ..:::::.
CCDS41 RLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLK
20 30 40 50 60 70
110 120 130 140 150 160
pF1KE1 TEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKM
::.::::. :::::::.: . . ::. :.:..:.. .:.::..: ..::. :..
CCDS41 TEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNL
80 90 100 110 120 130
170 180 190 200 210
pF1KE1 QEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
:::: ::.:: ....::..::::::: : : :: :. . :
CCDS41 QEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS
140 150 160 170 180
>>CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 (198 aa)
initn: 433 init1: 417 opt: 421 Z-score: 445.2 bits: 89.3 E(32554): 1.8e-18
Smith-Waterman score: 421; 47.4% identity (73.3% similar) in 135 aa overlap (80-214:64-198)
50 60 70 80 90 100
pF1KE1 SWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLR
: ::. ::.::: :. : ..:::::.
CCDS13 RLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLK
40 50 60 70 80 90
110 120 130 140 150 160
pF1KE1 TEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKM
::.::::. :::::::.: . . ::. :.:..:.. .:.::..: ..::. :..
CCDS13 TEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNL
100 110 120 130 140 150
170 180 190 200 210
pF1KE1 QEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
:::: ::.:: ....::..::::::: : : :: :. . :
CCDS13 QEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS
160 170 180 190
>>CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 (187 aa)
initn: 408 init1: 375 opt: 404 Z-score: 427.9 bits: 86.1 E(32554): 1.6e-17
Smith-Waterman score: 404; 43.7% identity (73.9% similar) in 142 aa overlap (75-216:29-168)
50 60 70 80 90 100
pF1KE1 CCCSCSWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVF
.: : :::..::.:...:. : ..:
CCDS44 MKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAF
10 20 30 40 50
110 120 130 140 150 160
pF1KE1 RAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREG
.:::..::::::. ::..::: : . .. ::. ::....:. . :::.::: .::
CCDS44 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE
60 70 80 90 100 110
170 180 190 200 210
pF1KE1 INKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
...: ::. ::.:: .:..::..::: :::.: : : : .::. ..:
CCDS44 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY--LDLVNPSSCGAEKQKGAKSS
120 130 140 150 160 170
CCDS44 ADCASLVPQCA
180
>>CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 (205 aa)
initn: 408 init1: 375 opt: 404 Z-score: 427.4 bits: 86.1 E(32554): 1.7e-17
Smith-Waterman score: 404; 43.7% identity (73.9% similar) in 142 aa overlap (75-216:47-186)
50 60 70 80 90 100
pF1KE1 CCCSCSWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVF
.: : :::..::.:...:. : ..:
CCDS12 KDMKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAF
20 30 40 50 60 70
110 120 130 140 150 160
pF1KE1 RAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREG
.:::..::::::. ::..::: : . .. ::. ::....:. . :::.::: .::
CCDS12 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE
80 90 100 110 120 130
170 180 190 200 210
pF1KE1 INKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
...: ::. ::.:: .:..::..::: :::.: : : : .::. ..:
CCDS12 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY--LDLVNPSSCGAEKQKGAKSS
140 150 160 170 180 190
CCDS12 ADCASLVPQCA
200
>>CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 (302 aa)
initn: 392 init1: 375 opt: 404 Z-score: 425.3 bits: 86.3 E(32554): 2.3e-17
Smith-Waterman score: 404; 43.7% identity (73.9% similar) in 142 aa overlap (75-216:144-283)
50 60 70 80 90 100
pF1KE1 CCCSCSWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVF
.: : :::..::.:...:. : ..:
CCDS44 KDMKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAF
120 130 140 150 160 170
110 120 130 140 150 160
pF1KE1 RAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREG
.:::..::::::. ::..::: : . .. ::. ::....:. . :::.::: .::
CCDS44 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE
180 190 200 210 220 230
170 180 190 200 210
pF1KE1 INKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
...: ::. ::.:: .:..::..::: :::.: : : : .::. ..:
CCDS44 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY--LDLVNPSSCGAEKQKGAKSS
240 250 260 270 280 290
CCDS44 ADCASLVPQCA
300
217 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:51:12 2016 done: Mon Nov 7 02:51:12 2016
Total Scan time: 2.240 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]