Result of FASTA (omim) for
pFN21AE1514
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1514, 243 aa
1>>>pF1KE1514 243 - 243 aa - 243 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6484+/-0.000371; mu= 12.9635+/- 0.023
mean_var=82.0637+/-16.312, 0's: 0 Z-trim(114.6): 107 B-trim: 1061 in 2/56
Lambda= 0.141579
statistics sampled from 24434 (24550) to 24434 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.288), width: 16
Scan time: 5.360
The best scores are: opt bits E(85289)
NP_001769 (OMIM: 109530) CD48 antigen isoform 1 pr ( 243) 1639 344.3 1.2e-94
NP_001242959 (OMIM: 109530) CD48 antigen isoform 2 ( 252) 1475 310.8 1.5e-84
XP_011508473 (OMIM: 109530) PREDICTED: CD48 antige ( 211) 1422 299.9 2.3e-81
XP_005245682 (OMIM: 109530) PREDICTED: CD48 antige ( 154) 841 181.1 9.4e-46
XP_016858356 (OMIM: 109530) PREDICTED: CD48 antige ( 142) 800 172.7 2.9e-43
XP_011507924 (OMIM: 180300,605554) PREDICTED: natu ( 329) 207 51.9 1.7e-06
NP_057466 (OMIM: 180300,605554) natural killer cel ( 365) 207 51.9 1.8e-06
NP_001034461 (OMIM: 614133) HEPACAM family member ( 462) 190 48.5 2.4e-05
XP_011507923 (OMIM: 180300,605554) PREDICTED: natu ( 334) 187 47.8 2.9e-05
NP_001160135 (OMIM: 180300,605554) natural killer ( 370) 187 47.8 3.1e-05
NP_937794 (OMIM: 614133) HEPACAM family member 2 i ( 450) 181 46.6 8.5e-05
NP_001275739 (OMIM: 614133) HEPACAM family member ( 455) 181 46.6 8.6e-05
NP_001275733 (OMIM: 614133) HEPACAM family member ( 485) 181 46.7 9e-05
NP_001138294 (OMIM: 153420) lymphocyte function-as ( 248) 161 42.4 0.0009
NP_001770 (OMIM: 153420) lymphocyte function-assoc ( 250) 161 42.4 0.0009
XP_016858358 (OMIM: 153420) PREDICTED: lymphocyte ( 257) 161 42.4 0.00092
XP_011514303 (OMIM: 614133) PREDICTED: HEPACAM fam ( 387) 155 41.3 0.003
NP_001333571 (OMIM: 614133) HEPACAM family member ( 387) 155 41.3 0.003
NP_001171810 (OMIM: 604513) SLAM family member 5 i ( 272) 152 40.6 0.0034
NP_003865 (OMIM: 604513) SLAM family member 5 isof ( 328) 152 40.6 0.004
NP_001317671 (OMIM: 604513) SLAM family member 5 i ( 339) 152 40.6 0.0041
NP_001171808 (OMIM: 604513) SLAM family member 5 i ( 345) 152 40.6 0.0042
XP_011508207 (OMIM: 603492) PREDICTED: signaling l ( 196) 147 39.5 0.0054
XP_016857620 (OMIM: 603492) PREDICTED: signaling l ( 218) 147 39.5 0.0059
XP_016856793 (OMIM: 600684) PREDICTED: T-lymphocyt ( 504) 150 40.3 0.0075
NP_058642 (OMIM: 605721) junctional adhesion molec ( 299) 146 39.4 0.0087
NP_001248385 (OMIM: 600684) T-lymphocyte surface a ( 641) 150 40.4 0.0091
NP_002339 (OMIM: 600684) T-lymphocyte surface anti ( 655) 150 40.4 0.0092
XP_016856790 (OMIM: 600684) PREDICTED: T-lymphocyt ( 664) 150 40.4 0.0093
XP_016856789 (OMIM: 600684) PREDICTED: T-lymphocyt ( 678) 150 40.4 0.0095
XP_011507854 (OMIM: 600684) PREDICTED: T-lymphocyt ( 679) 150 40.4 0.0095
XP_016856788 (OMIM: 600684) PREDICTED: T-lymphocyt ( 688) 150 40.4 0.0096
XP_016856787 (OMIM: 600684) PREDICTED: T-lymphocyt ( 697) 150 40.4 0.0097
NP_254273 (OMIM: 608589) SLAM family member 9 isof ( 289) 145 39.2 0.0097
XP_011507852 (OMIM: 600684) PREDICTED: T-lymphocyt ( 701) 150 40.4 0.0098
XP_011507851 (OMIM: 600684) PREDICTED: T-lymphocyt ( 702) 150 40.4 0.0098
XP_011507850 (OMIM: 600684) PREDICTED: T-lymphocyt ( 703) 150 40.4 0.0098
XP_016856786 (OMIM: 600684) PREDICTED: T-lymphocyt ( 711) 150 40.4 0.0099
XP_011525740 (OMIM: 604200) PREDICTED: sialic acid ( 500) 148 39.9 0.0099
NP_001269521 (OMIM: 606625) SLAM family member 7 i ( 296) 145 39.2 0.0099
>>NP_001769 (OMIM: 109530) CD48 antigen isoform 1 precur (243 aa)
initn: 1639 init1: 1639 opt: 1639 Z-score: 1820.4 bits: 344.3 E(85289): 1.2e-94
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGL
190 200 210 220 230 240
pF1KE1 LLT
:::
NP_001 LLT
>>NP_001242959 (OMIM: 109530) CD48 antigen isoform 2 pre (252 aa)
initn: 1475 init1: 1475 opt: 1475 Z-score: 1639.2 bits: 310.8 E(85289): 1.5e-84
Smith-Waterman score: 1475; 99.1% identity (100.0% similar) in 219 aa overlap (1-219:1-219)
10 20 30 40 50 60
pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGL
:::::::::::::::::::::::::::::::::::::..
NP_001 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLGKKDPWELRGAQGNWSCFEQRKA
190 200 210 220 230 240
pF1KE1 LLT
NP_001 GGPIQPPCTVWW
250
>>XP_011508473 (OMIM: 109530) PREDICTED: CD48 antigen is (211 aa)
initn: 1422 init1: 1422 opt: 1422 Z-score: 1581.8 bits: 299.9 E(85289): 2.3e-81
Smith-Waterman score: 1422; 100.0% identity (100.0% similar) in 211 aa overlap (33-243:1-211)
10 20 30 40 50 60
pF1KE1 SRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFYTF
::::::::::::::::::::::::::::::
XP_011 MTVVSGSNVTLNISESLPENYKQLTWFYTF
10 20 30
70 80 90 100 110 120
pF1KE1 DQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWK
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE1 IKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSVLE
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE1 TTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGLLL
160 170 180 190 200 210
pF1KE1 T
:
XP_011 T
>>XP_005245682 (OMIM: 109530) PREDICTED: CD48 antigen is (154 aa)
initn: 841 init1: 841 opt: 841 Z-score: 942.4 bits: 181.1 E(85289): 9.4e-46
Smith-Waterman score: 841; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV
::::::::
XP_005 WKIKLQVLARSFGVEWIASWLVVTVPTILGLLLT
130 140 150
>>XP_016858356 (OMIM: 109530) PREDICTED: CD48 antigen is (142 aa)
initn: 800 init1: 800 opt: 800 Z-score: 897.6 bits: 172.7 E(85289): 2.9e-43
Smith-Waterman score: 800; 98.3% identity (99.1% similar) in 117 aa overlap (127-243:26-142)
100 110 120 130 140 150
pF1KE1 SKVQKEDNSTYIMRVLKKTGNEQEWKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVI
. ::::::::::::::::::::::::::::
XP_016 MCSRGWDSCLALELLLLPLSLLVTSIQDPVPKPVIKIEKIEDMDDNCYLKLSCVI
10 20 30 40 50
160 170 180 190 200 210
pF1KE1 PGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCT
60 70 80 90 100 110
220 230 240
pF1KE1 LARSFGVEWIASWLVVTVPTILGLLLT
:::::::::::::::::::::::::::
XP_016 LARSFGVEWIASWLVVTVPTILGLLLT
120 130 140
>>XP_011507924 (OMIM: 180300,605554) PREDICTED: natural (329 aa)
initn: 125 init1: 79 opt: 207 Z-score: 237.8 bits: 51.9 E(85289): 1.7e-06
Smith-Waterman score: 207; 26.3% identity (56.0% similar) in 243 aa overlap (10-241:6-240)
10 20 30 40 50 60
pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
..: :::: . :: :.. .:: . :. .:. . ...:
XP_011 MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKK
10 20 30 40 50
70 80 90 100 110
pF1KE1 TFDQK-----IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLK
. .. :..:. : :. ...:. :. . .: :. .:..:.. : ..: .
XP_011 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 KTGNEQEWKIKLQVLDPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWY-GDKR
.:. : ... :.: : :: .. . :: : : . :::.. . .:.:.:: :.:
XP_011 ISGKVQTATFQVFVFDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWYRGSK-
120 130 140 150 160
180 190 200 210 220 230
pF1KE1 PFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWL
. . : . . : .. :::.::: :: .. :. :. : :.. : .
XP_011 -LIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFWPFLVI
170 180 190 200 210 220
240
pF1KE1 VVTVPTI-LGLLLT
.: . .. :: :
XP_011 IVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGG
230 240 250 260 270 280
>>NP_057466 (OMIM: 180300,605554) natural killer cell re (365 aa)
initn: 125 init1: 79 opt: 207 Z-score: 237.1 bits: 51.9 E(85289): 1.8e-06
Smith-Waterman score: 207; 26.3% identity (56.0% similar) in 243 aa overlap (10-241:6-240)
10 20 30 40 50 60
pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
..: :::: . :: :.. .:: . :. .:. . ...:
NP_057 MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKK
10 20 30 40 50
70 80 90 100 110
pF1KE1 TFDQK-----IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLK
. .. :..:. : :. ...:. :. . .: :. .:..:.. : ..: .
NP_057 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 KTGNEQEWKIKLQVLDPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWY-GDKR
.:. : ... :.: : :: .. . :: : : . :::.. . .:.:.:: :.:
NP_057 ISGKVQTATFQVFVFDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWYRGSK-
120 130 140 150 160
180 190 200 210 220 230
pF1KE1 PFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWL
. . : . . : .. :::.::: :: .. :. :. : :.. : .
NP_057 -LIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFWPFLVI
170 180 190 200 210 220
240
pF1KE1 VVTVPTI-LGLLLT
.: . .. :: :
NP_057 IVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGG
230 240 250 260 270 280
>>NP_001034461 (OMIM: 614133) HEPACAM family member 2 is (462 aa)
initn: 68 init1: 68 opt: 190 Z-score: 216.9 bits: 48.5 E(85289): 2.4e-05
Smith-Waterman score: 190; 22.9% identity (51.9% similar) in 231 aa overlap (9-224:19-245)
10 20 30 40
pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESL-
: ::. : : ... .: :: : :. . : . ..
NP_001 MGQDAFMEPFGDTLGVFQCKIYLLLFGACSGLKVTVPSHTVHG--VRGQALYLPVHYGFH
10 20 30 40 50
50 60 70 80 90 100
pF1KE1 -PENYKQLTWFYTFDQKIVEW---DSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNS
: . :. :.. . . .. . :: . ... . . : ...: :. .: :..
NP_001 TPASDIQIIWLFERPHTMPKYLLGSVNKSVVPDLEYQHKFTMMPPNASLLINPLQFPDEG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 TYIMRV-LKKTGN-EQEWKIKLQVLDPVPKPVIKIEKIEDMDDNC-YLKLSCVIPGES-V
.::..: .. .:. ::.. : ::: :::..:. . . :.: . : . .
NP_001 NYIVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRL
120 130 140 150 160 170
170 180 190 200 210
pF1KE1 NYTWYGDKRP------FPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPC
: : . :: . ::..:. . . .. :.: : : :: .. . . :
NP_001 AYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIM--PI
180 190 200 210 220 230
220 230 240
pF1KE1 TLARSFGVEWIASWLVVTVPTILGLLLT
.:..
NP_001 IYYGPYGLQVNSDKGLKVGEVFTVDLGEAILFDCSADSHPPNTYSWIRRTDNTTYIIKHG
240 250 260 270 280 290
>>XP_011507923 (OMIM: 180300,605554) PREDICTED: natural (334 aa)
initn: 125 init1: 79 opt: 187 Z-score: 215.6 bits: 47.8 E(85289): 2.9e-05
Smith-Waterman score: 187; 25.8% identity (54.8% similar) in 248 aa overlap (10-241:6-245)
10 20 30 40 50 60
pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
..: :::: . :: :.. .:: . :. .:. . ...:
XP_011 MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKK
10 20 30 40 50
70 80 90 100 110
pF1KE1 TFDQK-----IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLK
. .. :..:. : :. ...:. :. . .: :. .:..:.. : ..: .
XP_011 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTS
60 70 80 90 100 110
120 130 140 150 160
pF1KE1 KTGNEQEWKIKLQVL-----DPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWY
.:. : ... :. : : :: .. . :: : : . :::.. . .:.:.::
XP_011 ISGKVQTATFQVFVFESLLPDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWY
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 -GDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEW
:.: . . : . . : .. :::.::: :: .. :. :. : :.. :
XP_011 RGSK--LIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFW
180 190 200 210 220
230 240
pF1KE1 IASWLVVTVPTI-LGLLLT
..: . .. :: :
XP_011 PFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQT
230 240 250 260 270 280
>>NP_001160135 (OMIM: 180300,605554) natural killer cell (370 aa)
initn: 125 init1: 79 opt: 187 Z-score: 215.0 bits: 47.8 E(85289): 3.1e-05
Smith-Waterman score: 187; 25.8% identity (54.8% similar) in 248 aa overlap (10-241:6-245)
10 20 30 40 50 60
pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY
..: :::: . :: :.. .:: . :. .:. . ...:
NP_001 MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKK
10 20 30 40 50
70 80 90 100 110
pF1KE1 TFDQK-----IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLK
. .. :..:. : :. ...:. :. . .: :. .:..:.. : ..: .
NP_001 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTS
60 70 80 90 100 110
120 130 140 150 160
pF1KE1 KTGNEQEWKIKLQVL-----DPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWY
.:. : ... :. : : :: .. . :: : : . :::.. . .:.:.::
NP_001 ISGKVQTATFQVFVFESLLPDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWY
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 -GDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEW
:.: . . : . . : .. :::.::: :: .. :. :. : :.. :
NP_001 RGSK--LIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFW
180 190 200 210 220
230 240
pF1KE1 IASWLVVTVPTI-LGLLLT
..: . .. :: :
NP_001 PFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQT
230 240 250 260 270 280
243 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:11:59 2016 done: Mon Nov 7 01:12:00 2016
Total Scan time: 5.360 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]