Result of FASTA (omim) for
pFN21AE1501
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1501, 283 aa
1>>>pF1KE1501 283 - 283 aa - 283 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8000+/-0.000316; mu= 14.7783+/- 0.020
mean_var=133.0901+/-24.887, 0's: 0 Z-trim(121.5): 139 B-trim: 0 in 0/55
Lambda= 0.111174
statistics sampled from 38110 (38276) to 38110 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.785), E-opt: 0.2 (0.449), width: 16
Scan time: 6.840
The best scores are: opt bits E(85289)
NP_003811 (OMIM: 602746) tumor necrosis factor rec ( 283) 2050 339.5 4.5e-93
NP_001284534 (OMIM: 602746) tumor necrosis factor ( 184) 1392 233.7 2e-61
XP_006711082 (OMIM: 602746) PREDICTED: tumor necro ( 197) 1388 233.1 3.2e-61
XP_016858210 (OMIM: 602746) PREDICTED: tumor necro ( 186) 1308 220.2 2.3e-57
XP_016858209 (OMIM: 602746) PREDICTED: tumor necro ( 199) 1280 215.8 5.3e-56
XP_011540685 (OMIM: 602746) PREDICTED: tumor necro ( 265) 670 118.1 1.8e-26
XP_016883626 (OMIM: 109535,606843) PREDICTED: tumo ( 222) 381 71.6 1.5e-12
NP_001289682 (OMIM: 109535,606843) tumor necrosis ( 237) 381 71.7 1.5e-12
NP_001241 (OMIM: 109535,606843) tumor necrosis fac ( 277) 381 71.8 1.7e-12
NP_001309350 (OMIM: 109535,606843) tumor necrosis ( 281) 381 71.8 1.7e-12
XP_016883624 (OMIM: 109535,606843) PREDICTED: tumo ( 323) 381 71.8 1.9e-12
NP_690593 (OMIM: 109535,606843) tumor necrosis fac ( 203) 368 69.5 5.8e-12
XP_016883625 (OMIM: 109535,606843) PREDICTED: tumo ( 289) 368 69.7 7.3e-12
NP_001057 (OMIM: 191191) tumor necrosis factor rec ( 461) 366 69.6 1.2e-11
XP_011540365 (OMIM: 191191) PREDICTED: tumor necro ( 462) 366 69.6 1.2e-11
XP_011540362 (OMIM: 191191) PREDICTED: tumor necro ( 484) 366 69.6 1.3e-11
XP_016857700 (OMIM: 191191) PREDICTED: tumor necro ( 491) 366 69.6 1.3e-11
NP_003814 (OMIM: 603361) tumor necrosis factor rec ( 300) 352 67.1 4.4e-11
NP_001257916 (OMIM: 600979) tumor necrosis factor ( 416) 353 67.5 4.9e-11
XP_006719046 (OMIM: 600979) PREDICTED: tumor necro ( 255) 350 66.7 5e-11
XP_005253745 (OMIM: 600979) PREDICTED: tumor necro ( 399) 350 67.0 6.7e-11
NP_002333 (OMIM: 600979) tumor necrosis factor rec ( 435) 350 67.0 7.1e-11
XP_016857702 (OMIM: 191191) PREDICTED: tumor necro ( 440) 349 66.9 7.9e-11
XP_016857701 (OMIM: 191191) PREDICTED: tumor necro ( 440) 349 66.9 7.9e-11
NP_001257880 (OMIM: 174810,602080,603499,612301) t ( 299) 334 64.3 3.3e-10
NP_001257878 (OMIM: 174810,602080,603499,612301) t ( 263) 309 60.2 4.9e-09
NP_001257879 (OMIM: 174810,602080,603499,612301) t ( 337) 309 60.3 5.7e-09
XP_011527411 (OMIM: 109535,606843) PREDICTED: tumo ( 166) 302 58.8 7.9e-09
NP_003830 (OMIM: 174810,602080,603499,612301) tumo ( 616) 309 60.6 8.4e-09
NP_001309351 (OMIM: 109535,606843) tumor necrosis ( 225) 299 58.5 1.3e-08
XP_005260676 (OMIM: 109535,606843) PREDICTED: tumo ( 229) 299 58.5 1.4e-08
XP_011524546 (OMIM: 174810,602080,603499,612301) P ( 621) 296 58.5 3.6e-08
NP_002537 (OMIM: 239000,602643) tumor necrosis fac ( 401) 293 57.8 3.8e-08
XP_016866233 (OMIM: 605732) PREDICTED: tumor necro ( 444) 290 57.4 5.6e-08
NP_055267 (OMIM: 605732) tumor necrosis factor rec ( 655) 290 57.6 7.2e-08
NP_003781 (OMIM: 603366) tumor necrosis factor rec ( 417) 277 55.3 2.3e-07
NP_001034753 (OMIM: 603366) tumor necrosis factor ( 181) 256 51.5 1.4e-06
NP_683867 (OMIM: 603366) tumor necrosis factor rec ( 380) 258 52.2 1.8e-06
NP_683866 (OMIM: 603366) tumor necrosis factor rec ( 426) 256 51.9 2.4e-06
NP_001307548 (OMIM: 134637,601859) tumor necrosis ( 197) 239 48.8 9.7e-06
NP_690611 (OMIM: 134637,601859) tumor necrosis fac ( 220) 239 48.9 1e-05
NP_001265197 (OMIM: 174810,602080,603499,612301) t ( 602) 243 50.0 1.3e-05
NP_690610 (OMIM: 134637,601859) tumor necrosis fac ( 314) 239 49.0 1.3e-05
NP_000034 (OMIM: 134637,601859) tumor necrosis fac ( 335) 239 49.1 1.4e-05
XP_011538069 (OMIM: 134637,601859) PREDICTED: tumo ( 350) 239 49.1 1.4e-05
XP_006717882 (OMIM: 134637,601859) PREDICTED: tumo ( 362) 239 49.1 1.4e-05
XP_011538068 (OMIM: 134637,601859) PREDICTED: tumo ( 362) 239 49.1 1.4e-05
XP_011538067 (OMIM: 134637,601859) PREDICTED: tumo ( 368) 239 49.1 1.4e-05
NP_001056 (OMIM: 142680,191190,614810) tumor necro ( 455) 240 49.4 1.5e-05
XP_011538066 (OMIM: 134637,601859) PREDICTED: tumo ( 389) 239 49.2 1.5e-05
>>NP_003811 (OMIM: 602746) tumor necrosis factor recepto (283 aa)
initn: 2050 init1: 2050 opt: 2050 Z-score: 1792.0 bits: 339.5 E(85289): 4.5e-93
Smith-Waterman score: 2050; 99.6% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KE1 MEPPGDWGPPPWRSTPRTDVLRLVLYLTFLGAPCYAPALPSCKEDEYPVGSECCPKCSPG
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_003 MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPSCKEDEYPVGSECCPKCSPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 CSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 CSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 HQTKCSWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVVKVIVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 HQTKCSWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVVKVIVS
190 200 210 220 230 240
250 260 270 280
pF1KE1 VQRKRQEAEGEATVIEALQAPPDVTTVAVEETIPSFTGRSPNH
:::::::::::::::::::::::::::::::::::::::::::
NP_003 VQRKRQEAEGEATVIEALQAPPDVTTVAVEETIPSFTGRSPNH
250 260 270 280
>>NP_001284534 (OMIM: 602746) tumor necrosis factor rece (184 aa)
initn: 1392 init1: 1392 opt: 1392 Z-score: 1223.8 bits: 233.7 E(85289): 2e-61
Smith-Waterman score: 1392; 99.5% identity (100.0% similar) in 184 aa overlap (1-184:1-184)
10 20 30 40 50 60
pF1KE1 MEPPGDWGPPPWRSTPRTDVLRLVLYLTFLGAPCYAPALPSCKEDEYPVGSECCPKCSPG
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPSCKEDEYPVGSECCPKCSPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 CSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 HQTKCSWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVVKVIVS
::::
NP_001 HQTK
>>XP_006711082 (OMIM: 602746) PREDICTED: tumor necrosis (197 aa)
initn: 1386 init1: 1386 opt: 1388 Z-score: 1220.0 bits: 233.1 E(85289): 3.2e-61
Smith-Waterman score: 1388; 97.9% identity (98.9% similar) in 187 aa overlap (1-187:1-185)
10 20 30 40 50 60
pF1KE1 MEPPGDWGPPPWRSTPRTDVLRLVLYLTFLGAPCYAPALPSCKEDEYPVGSECCPKCSPG
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
XP_006 MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPSCKEDEYPVGSECCPKCSPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 CSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 HQTKCSWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVVKVIVS
::: .:
XP_006 HQT--NWPNHMCEKKKAKG
190
>>XP_016858210 (OMIM: 602746) PREDICTED: tumor necrosis (186 aa)
initn: 1308 init1: 1308 opt: 1308 Z-score: 1151.0 bits: 220.2 E(85289): 2.3e-57
Smith-Waterman score: 1308; 100.0% identity (100.0% similar) in 186 aa overlap (98-283:1-186)
70 80 90 100 110 120
pF1KE1 GELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFC
::::::::::::::::::::::::::::::
XP_016 MCDPAMGLRASRNCSRTENAVCGCSPGHFC
10 20 30
130 140 150 160 170 180
pF1KE1 IVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQHQTKCSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQHQTKCSW
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE1 LVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVVKVIVSVQRKRQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVVKVIVSVQRKRQE
100 110 120 130 140 150
250 260 270 280
pF1KE1 AEGEATVIEALQAPPDVTTVAVEETIPSFTGRSPNH
::::::::::::::::::::::::::::::::::::
XP_016 AEGEATVIEALQAPPDVTTVAVEETIPSFTGRSPNH
160 170 180
>>XP_016858209 (OMIM: 602746) PREDICTED: tumor necrosis (199 aa)
initn: 1280 init1: 1280 opt: 1280 Z-score: 1126.3 bits: 215.8 E(85289): 5.3e-56
Smith-Waterman score: 1280; 100.0% identity (100.0% similar) in 183 aa overlap (101-283:17-199)
80 90 100 110 120 130
pF1KE1 TGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFCIVQ
::::::::::::::::::::::::::::::
XP_016 MVSRPPRTPLSPSSWTPAMGLRASRNCSRTENAVCGCSPGHFCIVQ
10 20 30 40
140 150 160 170 180 190
pF1KE1 DGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQHQTKCSWLVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGTLEECQHQTKCSWLVT
50 60 70 80 90 100
200 210 220 230 240 250
pF1KE1 KAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVVKVIVSVQRKRQEAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVVKVIVSVQRKRQEAEG
110 120 130 140 150 160
260 270 280
pF1KE1 EATVIEALQAPPDVTTVAVEETIPSFTGRSPNH
:::::::::::::::::::::::::::::::::
XP_016 EATVIEALQAPPDVTTVAVEETIPSFTGRSPNH
170 180 190
>>XP_011540685 (OMIM: 602746) PREDICTED: tumor necrosis (265 aa)
initn: 723 init1: 670 opt: 670 Z-score: 596.2 bits: 118.1 E(85289): 1.8e-26
Smith-Waterman score: 670; 97.1% identity (99.0% similar) in 103 aa overlap (181-283:163-265)
160 170 180 190 200 210
pF1KE1 QKGGTESQDTLCQNCPPGTFSPNGTLEECQHQTKCSWLVTKAGAGTSSSHWVWWFLSGSL
:. .::::::::::::::::::::::::::
XP_011 FTAWGPGSQGGSLRLSEHWALHLPLPRPRPHSRRCSWLVTKAGAGTSSSHWVWWFLSGSL
140 150 160 170 180 190
220 230 240 250 260 270
pF1KE1 VIVIVCSTVGLIICVKRRKPRGDVVKVIVSVQRKRQEAEGEATVIEALQAPPDVTTVAVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VIVIVCSTVGLIICVKRRKPRGDVVKVIVSVQRKRQEAEGEATVIEALQAPPDVTTVAVE
200 210 220 230 240 250
280
pF1KE1 ETIPSFTGRSPNH
:::::::::::::
XP_011 ETIPSFTGRSPNH
260
>>XP_016883626 (OMIM: 109535,606843) PREDICTED: tumor ne (222 aa)
initn: 269 init1: 269 opt: 381 Z-score: 346.5 bits: 71.6 E(85289): 1.5e-12
Smith-Waterman score: 381; 31.9% identity (61.0% similar) in 182 aa overlap (21-197:6-182)
10 20 30 40 50
pF1KE1 MEPPGDWGPPPWRSTPRTDVLRLVLYLTFLGAPCYAPALPS-CKEDEYPVGSECCPKCSP
:. ::. .: : : :. :.: .: ..:.:: :.:
XP_016 MVRLPLQCVLWGCLLTA--VHPEPPTACREKQYLINSQCCSLCQP
10 20 30 40
60 70 80 90 100 110
pF1KE1 GYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVC
: .. : :.: : : :: . .. : ..: : ..::: .:::.... . ...:
XP_016 GQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTIC
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE1 GCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSP-NGTLEE
: : : .. : .: . . ::: :.. .: .::.:. :: : :: ....:.
XP_016 TCEEGWHC---TSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 CQHQTKC---SWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVV
:. :.: . .: .::.. .
XP_016 CHPWTSCETKDLVVQQAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFISGQEA
170 180 190 200 210 220
>>NP_001289682 (OMIM: 109535,606843) tumor necrosis fact (237 aa)
initn: 269 init1: 269 opt: 381 Z-score: 346.2 bits: 71.7 E(85289): 1.5e-12
Smith-Waterman score: 381; 31.9% identity (61.0% similar) in 182 aa overlap (21-197:6-182)
10 20 30 40 50
pF1KE1 MEPPGDWGPPPWRSTPRTDVLRLVLYLTFLGAPCYAPALPS-CKEDEYPVGSECCPKCSP
:. ::. .: : : :. :.: .: ..:.:: :.:
NP_001 MVRLPLQCVLWGCLLTA--VHPEPPTACREKQYLINSQCCSLCQP
10 20 30 40
60 70 80 90 100 110
pF1KE1 GYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVC
: .. : :.: : : :: . .. : ..: : ..::: .:::.... . ...:
NP_001 GQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTIC
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE1 GCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSP-NGTLEE
: : : .. : .: . . ::: :.. .: .::.:. :: : :: ....:.
NP_001 TCEEGWHC---TSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 CQHQTKC---SWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVV
:. :.: . .: .::.. .
NP_001 CHPWTSCETKDLVVQQAGTNKTDVVCGESWTMGPGESLGRSPGSAESPGGDPHHLRDPVC
170 180 190 200 210 220
>>NP_001241 (OMIM: 109535,606843) tumor necrosis factor (277 aa)
initn: 269 init1: 269 opt: 381 Z-score: 345.4 bits: 71.8 E(85289): 1.7e-12
Smith-Waterman score: 381; 31.9% identity (61.0% similar) in 182 aa overlap (21-197:6-182)
10 20 30 40 50
pF1KE1 MEPPGDWGPPPWRSTPRTDVLRLVLYLTFLGAPCYAPALPS-CKEDEYPVGSECCPKCSP
:. ::. .: : : :. :.: .: ..:.:: :.:
NP_001 MVRLPLQCVLWGCLLTA--VHPEPPTACREKQYLINSQCCSLCQP
10 20 30 40
60 70 80 90 100 110
pF1KE1 GYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVC
: .. : :.: : : :: . .. : ..: : ..::: .:::.... . ...:
NP_001 GQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTIC
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE1 GCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSP-NGTLEE
: : : .. : .: . . ::: :.. .: .::.:. :: : :: ....:.
NP_001 TCEEGWHC---TSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 CQHQTKC---SWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVV
:. :.: . .: .::.. .
NP_001 CHPWTSCETKDLVVQQAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAK
170 180 190 200 210 220
>>NP_001309350 (OMIM: 109535,606843) tumor necrosis fact (281 aa)
initn: 269 init1: 269 opt: 381 Z-score: 345.3 bits: 71.8 E(85289): 1.7e-12
Smith-Waterman score: 381; 31.9% identity (61.0% similar) in 182 aa overlap (21-197:6-182)
10 20 30 40 50
pF1KE1 MEPPGDWGPPPWRSTPRTDVLRLVLYLTFLGAPCYAPALPS-CKEDEYPVGSECCPKCSP
:. ::. .: : : :. :.: .: ..:.:: :.:
NP_001 MVRLPLQCVLWGCLLTA--VHPEPPTACREKQYLINSQCCSLCQP
10 20 30 40
60 70 80 90 100 110
pF1KE1 GYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVC
: .. : :.: : : :: . .. : ..: : ..::: .:::.... . ...:
NP_001 GQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTIC
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE1 GCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSP-NGTLEE
: : : .. : .: . . ::: :.. .: .::.:. :: : :: ....:.
NP_001 TCEEGWHC---TSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 CQHQTKC---SWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVV
:. :.: . .: .::.. .
NP_001 CHPWTSCETKDLVVQQAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFISESSE
170 180 190 200 210 220
283 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 20:15:03 2016 done: Sun Nov 6 20:15:04 2016
Total Scan time: 6.840 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]