Result of FASTA (omim) for
pFN21AE1472
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1472, 305 aa
1>>>pF1KE1472 305 - 305 aa - 305 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.5613+/-0.000483; mu= 19.8944+/- 0.030
mean_var=63.0293+/-13.225, 0's: 0 Z-trim(108.0): 94 B-trim: 0 in 0/49
Lambda= 0.161549
statistics sampled from 15984 (16041) to 15984 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.521), E-opt: 0.2 (0.188), width: 16
Scan time: 6.700
The best scores are: opt bits E(85289)
NP_942088 (OMIM: 601028) leukocyte surface antigen ( 305) 1945 462.3 5.3e-130
XP_005247965 (OMIM: 601028) PREDICTED: leukocyte s ( 312) 1931 459.1 5.1e-129
NP_001768 (OMIM: 601028) leukocyte surface antigen ( 323) 1931 459.1 5.3e-129
XP_005247966 (OMIM: 601028) PREDICTED: leukocyte s ( 293) 1857 441.8 7.6e-124
XP_011535276 (OMIM: 104311,172700,600274,607822,61 ( 463) 145 43.0 0.0014
XP_005267923 (OMIM: 104311,172700,600274,607822,61 ( 463) 145 43.0 0.0014
XP_011535275 (OMIM: 104311,172700,600274,607822,61 ( 463) 145 43.0 0.0014
NP_015557 (OMIM: 104311,172700,600274,607822,61369 ( 463) 145 43.0 0.0014
XP_005267921 (OMIM: 104311,172700,600274,607822,61 ( 467) 145 43.0 0.0014
XP_011535273 (OMIM: 104311,172700,600274,607822,61 ( 467) 145 43.0 0.0014
NP_000012 (OMIM: 104311,172700,600274,607822,61369 ( 467) 145 43.0 0.0014
XP_011535274 (OMIM: 104311,172700,600274,607822,61 ( 467) 145 43.0 0.0014
NP_036618 (OMIM: 600759,606889,613697) presenilin- ( 447) 137 41.1 0.0049
XP_016857325 (OMIM: 600759,606889,613697) PREDICTE ( 447) 137 41.1 0.0049
XP_005273256 (OMIM: 600759,606889,613697) PREDICTE ( 448) 137 41.1 0.0049
NP_000438 (OMIM: 600759,606889,613697) presenilin- ( 448) 137 41.1 0.0049
XP_016857324 (OMIM: 600759,606889,613697) PREDICTE ( 448) 137 41.1 0.0049
>>NP_942088 (OMIM: 601028) leukocyte surface antigen CD4 (305 aa)
initn: 1945 init1: 1945 opt: 1945 Z-score: 2455.0 bits: 462.3 E(85289): 5.3e-130
Smith-Waterman score: 1945; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305)
10 20 30 40 50 60
pF1KE1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
250 260 270 280 290 300
pF1KE1 PPRNN
:::::
NP_942 PPRNN
>>XP_005247965 (OMIM: 601028) PREDICTED: leukocyte surfa (312 aa)
initn: 1931 init1: 1931 opt: 1931 Z-score: 2437.2 bits: 459.1 E(85289): 5.1e-129
Smith-Waterman score: 1931; 100.0% identity (100.0% similar) in 303 aa overlap (1-303:1-303)
10 20 30 40 50 60
pF1KE1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
250 260 270 280 290 300
pF1KE1 PPRNN
:::
XP_005 PPRKAVEEPLNE
310
>>NP_001768 (OMIM: 601028) leukocyte surface antigen CD4 (323 aa)
initn: 1931 init1: 1931 opt: 1931 Z-score: 2437.0 bits: 459.1 E(85289): 5.3e-129
Smith-Waterman score: 1931; 100.0% identity (100.0% similar) in 303 aa overlap (1-303:1-303)
10 20 30 40 50 60
pF1KE1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
250 260 270 280 290 300
pF1KE1 PPRNN
:::
NP_001 PPRKAVEEPLNAFKESKGMMNDE
310 320
>>XP_005247966 (OMIM: 601028) PREDICTED: leukocyte surfa (293 aa)
initn: 1857 init1: 1857 opt: 1857 Z-score: 2344.4 bits: 441.8 E(85289): 7.6e-124
Smith-Waterman score: 1857; 100.0% identity (100.0% similar) in 292 aa overlap (1-292:1-292)
10 20 30 40 50 60
pF1KE1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVE
250 260 270 280 290
pF1KE1 PPRNN
>>XP_011535276 (OMIM: 104311,172700,600274,607822,613694 (463 aa)
initn: 69 init1: 69 opt: 145 Z-score: 185.3 bits: 43.0 E(85289): 0.0014
Smith-Waterman score: 145; 20.4% identity (57.1% similar) in 191 aa overlap (110-292:53-237)
80 90 100 110 120 130
pF1KE1 DFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKY---RVVSW
:: . .:.: .: . . ::: .:.
XP_011 SNTNDNRERQEHNDRRSLGHPEPLSNGRPQGN-SRQVVEQDEEEDEELTLKYGAKHVIML
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE1 FSPNENILIVIFPIFAILLFW----GQFGIKTLKYRSGGMDEKTI-ALLVAGLVITVIVI
: : ..:. . . :. ::. . . . .... ..: :...:.:::.
XP_011 FVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVV
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE1 VGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYIL
. .: : .: .. ::..: .:... . .. .. . .. ... .. . .
XP_011 MTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNF
150 160 170 180 190 200
260 270 280 290 300
pF1KE1 AVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQPPRNN
.:::. : .::: .. .. .. :..::..:..
XP_011 GVVGM-----ISIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVA
210 220 230 240 250
XP_011 VLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSKNSKYNAEST
260 270 280 290 300 310
>>XP_005267923 (OMIM: 104311,172700,600274,607822,613694 (463 aa)
initn: 69 init1: 69 opt: 145 Z-score: 185.3 bits: 43.0 E(85289): 0.0014
Smith-Waterman score: 145; 20.4% identity (57.1% similar) in 191 aa overlap (110-292:53-237)
80 90 100 110 120 130
pF1KE1 DFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKY---RVVSW
:: . .:.: .: . . ::: .:.
XP_005 SNTNDNRERQEHNDRRSLGHPEPLSNGRPQGN-SRQVVEQDEEEDEELTLKYGAKHVIML
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE1 FSPNENILIVIFPIFAILLFW----GQFGIKTLKYRSGGMDEKTI-ALLVAGLVITVIVI
: : ..:. . . :. ::. . . . .... ..: :...:.:::.
XP_005 FVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVV
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE1 VGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYIL
. .: : .: .. ::..: .:... . .. .. . .. ... .. . .
XP_005 MTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNF
150 160 170 180 190 200
260 270 280 290 300
pF1KE1 AVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQPPRNN
.:::. : .::: .. .. .. :..::..:..
XP_005 GVVGM-----ISIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVA
210 220 230 240 250
XP_005 VLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSKNSKYNAEST
260 270 280 290 300 310
>>XP_011535275 (OMIM: 104311,172700,600274,607822,613694 (463 aa)
initn: 69 init1: 69 opt: 145 Z-score: 185.3 bits: 43.0 E(85289): 0.0014
Smith-Waterman score: 145; 20.4% identity (57.1% similar) in 191 aa overlap (110-292:53-237)
80 90 100 110 120 130
pF1KE1 DFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKY---RVVSW
:: . .:.: .: . . ::: .:.
XP_011 SNTNDNRERQEHNDRRSLGHPEPLSNGRPQGN-SRQVVEQDEEEDEELTLKYGAKHVIML
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE1 FSPNENILIVIFPIFAILLFW----GQFGIKTLKYRSGGMDEKTI-ALLVAGLVITVIVI
: : ..:. . . :. ::. . . . .... ..: :...:.:::.
XP_011 FVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVV
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE1 VGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYIL
. .: : .: .. ::..: .:... . .. .. . .. ... .. . .
XP_011 MTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNF
150 160 170 180 190 200
260 270 280 290 300
pF1KE1 AVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQPPRNN
.:::. : .::: .. .. .. :..::..:..
XP_011 GVVGM-----ISIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVA
210 220 230 240 250
XP_011 VLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSKNSKYNAEST
260 270 280 290 300 310
>>NP_015557 (OMIM: 104311,172700,600274,607822,613694,61 (463 aa)
initn: 69 init1: 69 opt: 145 Z-score: 185.3 bits: 43.0 E(85289): 0.0014
Smith-Waterman score: 145; 20.4% identity (57.1% similar) in 191 aa overlap (110-292:53-237)
80 90 100 110 120 130
pF1KE1 DFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKY---RVVSW
:: . .:.: .: . . ::: .:.
NP_015 SNTNDNRERQEHNDRRSLGHPEPLSNGRPQGN-SRQVVEQDEEEDEELTLKYGAKHVIML
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE1 FSPNENILIVIFPIFAILLFW----GQFGIKTLKYRSGGMDEKTI-ALLVAGLVITVIVI
: : ..:. . . :. ::. . . . .... ..: :...:.:::.
NP_015 FVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVV
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE1 VGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYIL
. .: : .: .. ::..: .:... . .. .. . .. ... .. . .
NP_015 MTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNF
150 160 170 180 190 200
260 270 280 290 300
pF1KE1 AVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQPPRNN
.:::. : .::: .. .. .. :..::..:..
NP_015 GVVGM-----ISIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVA
210 220 230 240 250
NP_015 VLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSKNSKYNAEST
260 270 280 290 300 310
>>XP_005267921 (OMIM: 104311,172700,600274,607822,613694 (467 aa)
initn: 69 init1: 69 opt: 145 Z-score: 185.3 bits: 43.0 E(85289): 0.0014
Smith-Waterman score: 145; 20.4% identity (57.1% similar) in 191 aa overlap (110-292:57-241)
80 90 100 110 120 130
pF1KE1 DFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKY---RVVSW
:: . .:.: .: . . ::: .:.
XP_005 RSQNDNRERQEHNDRRSLGHPEPLSNGRPQGN-SRQVVEQDEEEDEELTLKYGAKHVIML
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE1 FSPNENILIVIFPIFAILLFW----GQFGIKTLKYRSGGMDEKTI-ALLVAGLVITVIVI
: : ..:. . . :. ::. . . . .... ..: :...:.:::.
XP_005 FVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVV
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE1 VGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYIL
. .: : .: .. ::..: .:... . .. .. . .. ... .. . .
XP_005 MTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNF
150 160 170 180 190 200
260 270 280 290 300
pF1KE1 AVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQPPRNN
.:::. : .::: .. .. .. :..::..:..
XP_005 GVVGM-----ISIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVA
210 220 230 240 250 260
XP_005 VLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSKNSKYNAEST
270 280 290 300 310 320
>>XP_011535273 (OMIM: 104311,172700,600274,607822,613694 (467 aa)
initn: 69 init1: 69 opt: 145 Z-score: 185.3 bits: 43.0 E(85289): 0.0014
Smith-Waterman score: 145; 20.4% identity (57.1% similar) in 191 aa overlap (110-292:57-241)
80 90 100 110 120 130
pF1KE1 DFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKY---RVVSW
:: . .:.: .: . . ::: .:.
XP_011 RSQNDNRERQEHNDRRSLGHPEPLSNGRPQGN-SRQVVEQDEEEDEELTLKYGAKHVIML
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE1 FSPNENILIVIFPIFAILLFW----GQFGIKTLKYRSGGMDEKTI-ALLVAGLVITVIVI
: : ..:. . . :. ::. . . . .... ..: :...:.:::.
XP_011 FVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVV
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE1 VGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYIL
. .: : .: .. ::..: .:... . .. .. . .. ... .. . .
XP_011 MTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNF
150 160 170 180 190 200
260 270 280 290 300
pF1KE1 AVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQPPRNN
.:::. : .::: .. .. .. :..::..:..
XP_011 GVVGM-----ISIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVA
210 220 230 240 250 260
XP_011 VLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSKNSKYNAEST
270 280 290 300 310 320
305 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:45:17 2016 done: Sun Nov 6 23:45:18 2016
Total Scan time: 6.700 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]