FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1468, 947 aa
  1>>>pF1KE1468 947 - 947 aa - 947 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.3023+/-0.0011; mu= -9.3641+/- 0.066
 mean_var=474.1096+/-99.695, 0's: 0 Z-trim(114.6): 302  B-trim: 0 in 0/55
 Lambda= 0.058903
 statistics sampled from 14799 (15131) to 14799 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.465), width:  16
 Scan time:  5.430

The best scores are:                                      opt bits E(32554)
CCDS74079.1 MAP3K14 gene_id:9020|Hs108|chr17       ( 947) 6541 571.2 3.3e-162


>>CCDS74079.1 MAP3K14 gene_id:9020|Hs108|chr17            (947 aa)
 initn: 6541 init1: 6541 opt: 6541  Z-score: 3025.6  bits: 571.2 E(32554): 3.3e-162
Smith-Waterman score: 6541; 100.0% identity (100.0% similar) in 947 aa overlap (1-947:1-947)

               10        20        30        40        50        60
pF1KE1 MAVMEMACPGAPGSAVGQQKELPKAKEKTPPLGKKQSSVYKLEAVEKSPVFCGKWEILND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MAVMEMACPGAPGSAVGQQKELPKAKEKTPPLGKKQSSVYKLEAVEKSPVFCGKWEILND
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VITKGTAKEGSEAGPAAISIIAQAECENSQEFSPTFSERIFIAGSKQYSQSESLDQIPNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VITKGTAKEGSEAGPAAISIIAQAECENSQEFSPTFSERIFIAGSKQYSQSESLDQIPNN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 VAHATEGKMARVCWKGKRRSKARKKRKKKSSKSLAHAGVALAKPLPRTPEQESCTIPVQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VAHATEGKMARVCWKGKRRSKARKKRKKKSSKSLAHAGVALAKPLPRTPEQESCTIPVQE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 DESPLGAPYVRNTPQFTKPLKEPGLGQLCFKQLGEGLRPALPRSELHKLISPLQCLNHVW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DESPLGAPYVRNTPQFTKPLKEPGLGQLCFKQLGEGLRPALPRSELHKLISPLQCLNHVW
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 KLHHPQDGGPLPLPTHPFPYSRLPHPFPFHPLQPWKPHPLESFLGKLACVDSQKPLPDPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KLHHPQDGGPLPLPTHPFPYSRLPHPFPFHPLQPWKPHPLESFLGKLACVDSQKPLPDPH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 LSKLACVDSPKPLPGPHLEPSCLSRGAHEKFSVEEYLVHALQGSVSSGQAHSLTSLAKTW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LSKLACVDSPKPLPGPHLEPSCLSRGAHEKFSVEEYLVHALQGSVSSGQAHSLTSLAKTW
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 AARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDK
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 QTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 QTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE1 VKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVC
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE1 LQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE1 RGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGG
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE1 LKSPWRGEYKEPRHPPPNQANYHQTLHAQPRELSPRAPGPRPAEETTGRAPKLQPPLPPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LKSPWRGEYKEPRHPPPNQANYHQTLHAQPRELSPRAPGPRPAEETTGRAPKLQPPLPPE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE1 PPEPNKSPPLTLSKEESGMWEPLPLSSLEPAPARNPSSPERKATVPEQELQQLEIELFLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PPEPNKSPPLTLSKEESGMWEPLPLSSLEPAPARNPSSPERKATVPEQELQQLEIELFLN
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KE1 SLSQPFSLEEQEQILSCLSIDSLSLSDDSEKNPSKASQSSRDTLSSGVHSWSSQAEARSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SLSQPFSLEEQEQILSCLSIDSLSLSDDSEKNPSKASQSSRDTLSSGVHSWSSQAEARSS
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KE1 SWNMVLARGRPTDTPSYFNGVKVQIQSLNGEHLHIREFHRVKVGDIATGISSQIPAAAFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SWNMVLARGRPTDTPSYFNGVKVQIQSLNGEHLHIREFHRVKVGDIATGISSQIPAAAFS
              850       860       870       880       890       900

              910       920       930       940       
pF1KE1 LVTKDGQPVRYDMEVPDSGIDLQCTLAPDGSFAWSWRVKHGQLENRP
       :::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LVTKDGQPVRYDMEVPDSGIDLQCTLAPDGSFAWSWRVKHGQLENRP
              910       920       930       940       




947 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 15:25:14 2016 done: Mon Nov  7 15:25:15 2016
 Total Scan time:  5.430 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]