Result of FASTA (ccds) for
pFN21AE1443
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1443, 466 aa
1>>>pF1KE1443 466 - 466 aa - 466 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6048+/-0.000666; mu= 17.6309+/- 0.041
mean_var=85.8245+/-16.709, 0's: 0 Z-trim(112.2): 19 B-trim: 51 in 2/52
Lambda= 0.138442
statistics sampled from 13018 (13034) to 13018 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.75), E-opt: 0.2 (0.4), width: 16
Scan time: 3.670
The best scores are: opt bits E(32554)
CCDS5546.1 NSUN5 gene_id:55695|Hs108|chr7 ( 466) 3121 632.8 2.2e-181
CCDS55119.1 NSUN5 gene_id:55695|Hs108|chr7 ( 470) 2905 589.7 2.2e-168
CCDS5547.1 NSUN5 gene_id:55695|Hs108|chr7 ( 429) 2863 581.3 6.8e-166
CCDS55118.1 NSUN5 gene_id:55695|Hs108|chr7 ( 391) 2189 446.6 2.1e-125
CCDS44811.1 NOP2 gene_id:4839|Hs108|chr12 ( 808) 380 85.6 2.2e-16
CCDS58203.1 NOP2 gene_id:4839|Hs108|chr12 ( 812) 380 85.6 2.2e-16
CCDS58204.1 NOP2 gene_id:4839|Hs108|chr12 ( 845) 380 85.6 2.2e-16
CCDS58202.1 NOP2 gene_id:4839|Hs108|chr12 ( 628) 375 84.5 3.5e-16
>>CCDS5546.1 NSUN5 gene_id:55695|Hs108|chr7 (466 aa)
initn: 3121 init1: 3121 opt: 3121 Z-score: 3369.8 bits: 632.8 E(32554): 2.2e-181
Smith-Waterman score: 3121; 100.0% identity (100.0% similar) in 466 aa overlap (1-466:1-466)
10 20 30 40 50 60
pF1KE1 MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
370 380 390 400 410 420
430 440 450 460
pF1KE1 VIERVEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VIERVEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
430 440 450 460
>>CCDS55119.1 NSUN5 gene_id:55695|Hs108|chr7 (470 aa)
initn: 2929 init1: 2905 opt: 2905 Z-score: 3136.6 bits: 589.7 E(32554): 2.2e-168
Smith-Waterman score: 2905; 95.4% identity (97.8% similar) in 456 aa overlap (1-456:1-456)
10 20 30 40 50 60
pF1KE1 MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
370 380 390 400 410 420
430 440 450 460
pF1KE1 VIERVEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
::::::::: ..:. .. . ::: :.. ..:.
CCDS55 VIERVEVPSLTGQSISTRTHTQPSPKEKEETAKSRSRCLHTALHIAEAPG
430 440 450 460 470
>>CCDS5547.1 NSUN5 gene_id:55695|Hs108|chr7 (429 aa)
initn: 2863 init1: 2863 opt: 2863 Z-score: 3091.8 bits: 581.3 E(32554): 6.8e-166
Smith-Waterman score: 2863; 100.0% identity (100.0% similar) in 428 aa overlap (1-428:1-428)
10 20 30 40 50 60
pF1KE1 MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
370 380 390 400 410 420
430 440 450 460
pF1KE1 VIERVEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
::::::::
CCDS55 VIERVEVPR
>>CCDS55118.1 NSUN5 gene_id:55695|Hs108|chr7 (391 aa)
initn: 2175 init1: 2175 opt: 2189 Z-score: 2364.9 bits: 446.6 E(32554): 2.1e-125
Smith-Waterman score: 2527; 91.1% identity (91.1% similar) in 428 aa overlap (1-428:1-390)
10 20 30 40 50 60
pF1KE1 MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
::::::::::::: :::::::::
CCDS55 RAEKKLRPHLAKV--------------------------------------HRGVSRNED
70 80
130 140 150 160 170 180
pF1KE1 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE1 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE1 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE1 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE1 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
330 340 350 360 370 380
430 440 450 460
pF1KE1 VIERVEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
::::::::
CCDS55 VIERVEVPR
390
>>CCDS44811.1 NOP2 gene_id:4839|Hs108|chr12 (808 aa)
initn: 276 init1: 232 opt: 380 Z-score: 407.8 bits: 85.6 E(32554): 2.2e-16
Smith-Waterman score: 395; 32.2% identity (54.5% similar) in 354 aa overlap (131-460:299-625)
110 120 130 140 150
pF1KE1 RLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFV--RVNTLKTCSDDVVDYFKRQG
:...:: : :.::::: :... . .:
CCDS44 DLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRG
270 280 290 300 310 320
160 170 180 190 200 210
pF1KE1 FSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLP
. :: : :: :.:. ... . : : ::: .:: .: ::
CCDS44 VN-------LDPL----GKWSKTG-----LVVYDSSVPIGATPEYLAGHYMLQGASSMLP
330 340 350 360 370
220 230 240 250 260 270
pF1KE1 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC
.: : : ...: : :::.:::..: :.:: : :.: : .:.:: :.. : : ::.
CCDS44 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN
380 390 400 410 420 430
280 290 300 310 320 330
pF1KE1 CELAEED---FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHAL
... : : : . : .::: :::.:. :. .:.. : . . .
CCDS44 TIISHYDGRQFPKVVGGFDR------VLLDAPCSGTGVISK---DPAVKTNKDEKDILRC
440 450 460 470 480
340 350 360 370 380
pF1KE1 AGFQQRALCHAL-----TFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA
: .:.. : :. : . ::: :::. :::: :: ::.. ::.:.
CCDS44 AHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR--NVRLVPTGLD
490 500 510 520 530 540
390 400 410 420 430 440
pF1KE1 WPHRGLSTF------PGAEHCLRASPETTLSSGFFVAVIERVE--VPSSASQAKASA-PE
. ..:.. : :. . : :.: .:::.: ... .:.: . . .: :
CCDS44 FGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPT
550 560 570 580 590 600
450 460
pF1KE1 RT--PSPAPKRKKRQQRA--AAGACTPPCT
. :. :: .. .: : : ::
CCDS44 NVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVP
610 620 630 640 650 660
>>CCDS58203.1 NOP2 gene_id:4839|Hs108|chr12 (812 aa)
initn: 276 init1: 232 opt: 380 Z-score: 407.8 bits: 85.6 E(32554): 2.2e-16
Smith-Waterman score: 395; 32.2% identity (54.5% similar) in 354 aa overlap (131-460:303-629)
110 120 130 140 150
pF1KE1 RLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFV--RVNTLKTCSDDVVDYFKRQG
:...:: : :.::::: :... . .:
CCDS58 DLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRG
280 290 300 310 320 330
160 170 180 190 200 210
pF1KE1 FSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLP
. :: : :: :.:. ... . : : ::: .:: .: ::
CCDS58 VN-------LDPL----GKWSKTG-----LVVYDSSVPIGATPEYLAGHYMLQGASSMLP
340 350 360 370
220 230 240 250 260 270
pF1KE1 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC
.: : : ...: : :::.:::..: :.:: : :.: : .:.:: :.. : : ::.
CCDS58 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN
380 390 400 410 420 430
280 290 300 310 320 330
pF1KE1 CELAEED---FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHAL
... : : : . : .::: :::.:. :. .:.. : . . .
CCDS58 TIISHYDGRQFPKVVGGFDR------VLLDAPCSGTGVISK---DPAVKTNKDEKDILRC
440 450 460 470 480
340 350 360 370 380
pF1KE1 AGFQQRALCHAL-----TFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA
: .:.. : :. : . ::: :::. :::: :: ::.. ::.:.
CCDS58 AHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR--NVRLVPTGLD
490 500 510 520 530 540
390 400 410 420 430 440
pF1KE1 WPHRGLSTF------PGAEHCLRASPETTLSSGFFVAVIERVE--VPSSASQAKASA-PE
. ..:.. : :. . : :.: .:::.: ... .:.: . . .: :
CCDS58 FGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPT
550 560 570 580 590 600
450 460
pF1KE1 RT--PSPAPKRKKRQQRA--AAGACTPPCT
. :. :: .. .: : : ::
CCDS58 NVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVP
610 620 630 640 650 660
>>CCDS58204.1 NOP2 gene_id:4839|Hs108|chr12 (845 aa)
initn: 276 init1: 232 opt: 380 Z-score: 407.5 bits: 85.6 E(32554): 2.2e-16
Smith-Waterman score: 395; 32.2% identity (54.5% similar) in 354 aa overlap (131-460:336-662)
110 120 130 140 150
pF1KE1 RLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFV--RVNTLKTCSDDVVDYFKRQG
:...:: : :.::::: :... . .:
CCDS58 DLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRG
310 320 330 340 350 360
160 170 180 190 200 210
pF1KE1 FSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLP
. :: : :: :.:. ... . : : ::: .:: .: ::
CCDS58 VN-------LDPL----GKWSKTG-----LVVYDSSVPIGATPEYLAGHYMLQGASSMLP
370 380 390 400
220 230 240 250 260 270
pF1KE1 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC
.: : : ...: : :::.:::..: :.:: : :.: : .:.:: :.. : : ::.
CCDS58 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN
410 420 430 440 450 460
280 290 300 310 320 330
pF1KE1 CELAEED---FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHAL
... : : : . : .::: :::.:. :. .:.. : . . .
CCDS58 TIISHYDGRQFPKVVGGFDR------VLLDAPCSGTGVISK---DPAVKTNKDEKDILRC
470 480 490 500 510 520
340 350 360 370 380
pF1KE1 AGFQQRALCHAL-----TFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA
: .:.. : :. : . ::: :::. :::: :: ::.. ::.:.
CCDS58 AHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR--NVRLVPTGLD
530 540 550 560 570
390 400 410 420 430 440
pF1KE1 WPHRGLSTF------PGAEHCLRASPETTLSSGFFVAVIERVE--VPSSASQAKASA-PE
. ..:.. : :. . : :.: .:::.: ... .:.: . . .: :
CCDS58 FGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPT
580 590 600 610 620 630
450 460
pF1KE1 RT--PSPAPKRKKRQQRA--AAGACTPPCT
. :. :: .. .: : : ::
CCDS58 NVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVP
640 650 660 670 680 690
>>CCDS58202.1 NOP2 gene_id:4839|Hs108|chr12 (628 aa)
initn: 276 init1: 232 opt: 375 Z-score: 403.9 bits: 84.5 E(32554): 3.5e-16
Smith-Waterman score: 377; 32.4% identity (54.8% similar) in 321 aa overlap (131-432:299-592)
110 120 130 140 150
pF1KE1 RLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFV--RVNTLKTCSDDVVDYFKRQG
:...:: : :.::::: :... . .:
CCDS58 DLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRG
270 280 290 300 310 320
160 170 180 190 200 210
pF1KE1 FSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLP
. :: : :: :.:. ... . : : ::: .:: .: ::
CCDS58 VN-------LDPL----GKWSKTG-----LVVYDSSVPIGATPEYLAGHYMLQGASSMLP
330 340 350 360 370
220 230 240 250 260 270
pF1KE1 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC
.: : : ...: : :::.:::..: :.:: : :.: : .:.:: :.. : : ::.
CCDS58 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN
380 390 400 410 420 430
280 290 300 310 320 330
pF1KE1 CELAEED---FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHAL
... : : : . : .::: :::.:. :. .:.. : . . .
CCDS58 TIISHYDGRQFPKVVGGFDR------VLLDAPCSGTGVISK---DPAVKTNKDEKDILRC
440 450 460 470 480
340 350 360 370 380
pF1KE1 AGFQQRALCHAL-----TFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA
: .:.. : :. : . ::: :::. :::: :: ::.. ::.:.
CCDS58 AHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR--NVRLVPTGLD
490 500 510 520 530 540
390 400 410 420 430 440
pF1KE1 WPHRGLSTF------PGAEHCLRASPETTLSSGFFVAVIERVE--VPSSASQAKASAPER
. ..:.. : :. . : :.: .:::.: ... .:.: .
CCDS58 FGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTDGVLLCRSG
550 560 570 580 590 600
450 460
pF1KE1 TPSPAPKRKKRQQRAAAGACTPPCT
CCDS58 WTAVVQSQLIATSTFQVQAILVPQTPK
610 620
466 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:10:29 2016 done: Mon Nov 7 02:10:29 2016
Total Scan time: 3.670 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]