Result of FASTA (ccds) for
pFN21AE1428
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1428, 310 aa
1>>>pF1KE1428 310 - 310 aa - 310 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6246+/-0.000787; mu= 15.3510+/- 0.048
mean_var=105.7967+/-21.757, 0's: 0 Z-trim(110.6): 77 B-trim: 2 in 1/53
Lambda= 0.124692
statistics sampled from 11648 (11730) to 11648 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.36), width: 16
Scan time: 2.720
The best scores are: opt bits E(32554)
CCDS30924.1 FCGR2B gene_id:2213|Hs108|chr1 ( 310) 2122 392.0 3.1e-109
CCDS53414.1 FCGR2B gene_id:2213|Hs108|chr1 ( 303) 2050 379.1 2.4e-105
CCDS30925.1 FCGR2B gene_id:2213|Hs108|chr1 ( 291) 1752 325.4 3.2e-89
CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1 ( 316) 1329 249.4 2.7e-66
CCDS44264.1 FCGR2A gene_id:2212|Hs108|chr1 ( 317) 1327 249.0 3.5e-66
CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1 ( 233) 607 119.4 2.8e-27
CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1 ( 269) 607 119.4 3e-27
CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1 ( 254) 589 116.2 2.8e-26
CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1 ( 290) 589 116.2 3e-26
CCDS72961.1 FCGR3B gene_id:2215|Hs108|chr1 ( 216) 585 115.4 4.1e-26
CCDS933.1 FCGR1A gene_id:2209|Hs108|chr1 ( 374) 565 112.0 7.2e-25
CCDS72844.1 FCGR1B gene_id:2210|Hs108|chr1 ( 224) 548 108.7 4.2e-24
CCDS72845.1 FCGR1B gene_id:2210|Hs108|chr1 ( 280) 546 108.5 6.3e-24
CCDS1184.1 FCER1A gene_id:2205|Hs108|chr1 ( 257) 490 98.4 6.4e-21
CCDS72963.1 FCRLB gene_id:127943|Hs108|chr1 ( 318) 434 88.4 8e-18
CCDS30927.1 FCRLB gene_id:127943|Hs108|chr1 ( 426) 434 88.5 9.8e-18
CCDS72962.1 FCRLB gene_id:127943|Hs108|chr1 ( 275) 429 87.4 1.3e-17
CCDS72965.1 FCRLB gene_id:127943|Hs108|chr1 ( 311) 399 82.1 6.2e-16
CCDS72964.1 FCRLB gene_id:127943|Hs108|chr1 ( 268) 394 81.1 1e-15
CCDS1165.1 FCRL5 gene_id:83416|Hs108|chr1 ( 977) 398 82.4 1.6e-15
CCDS1166.1 FCRL4 gene_id:83417|Hs108|chr1 ( 515) 365 76.2 6.1e-14
CCDS1167.1 FCRL3 gene_id:115352|Hs108|chr1 ( 734) 338 71.5 2.3e-12
CCDS81385.1 FCRL3 gene_id:115352|Hs108|chr1 ( 742) 338 71.5 2.3e-12
CCDS72960.1 FCGR3B gene_id:2215|Hs108|chr1 ( 130) 324 68.2 3.9e-12
>>CCDS30924.1 FCGR2B gene_id:2213|Hs108|chr1 (310 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 2074.7 bits: 392.0 E(32554): 3.1e-109
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
250 260 270 280 290 300
310
pF1KE1 LEEPDDQNRI
::::::::::
CCDS30 LEEPDDQNRI
310
>>CCDS53414.1 FCGR2B gene_id:2213|Hs108|chr1 (303 aa)
initn: 1805 init1: 1805 opt: 2050 Z-score: 2004.8 bits: 379.1 E(32554): 2.4e-105
Smith-Waterman score: 2050; 97.7% identity (97.7% similar) in 310 aa overlap (1-310:1-303)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
:::::::::::::::::::::::::::::::::::::: :::::::::::::::
CCDS53 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLA-------APPKAVLKLEPQWIN
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
240 250 260 270 280 290
310
pF1KE1 LEEPDDQNRI
::::::::::
CCDS53 LEEPDDQNRI
300
>>CCDS30925.1 FCGR2B gene_id:2213|Hs108|chr1 (291 aa)
initn: 1793 init1: 1745 opt: 1752 Z-score: 1715.3 bits: 325.4 E(32554): 3.2e-89
Smith-Waterman score: 1933; 93.9% identity (93.9% similar) in 310 aa overlap (1-310:1-291)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
:::::::::::::: :::::::::::::::::::::::::::
CCDS30 VVALIYCRKKRISA-------------------NPTNPDEADKVGAENTITYSLLMHPDA
250 260 270 280
310
pF1KE1 LEEPDDQNRI
::::::::::
CCDS30 LEEPDDQNRI
290
>>CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1 (316 aa)
initn: 1210 init1: 1152 opt: 1329 Z-score: 1303.6 bits: 249.4 E(32554): 2.7e-66
Smith-Waterman score: 1329; 81.9% identity (90.4% similar) in 249 aa overlap (10-254:1-247)
10 20 30 40 50
pF1KE1 MGILSFLPVLATESDWADCKSPQP-WGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWI
.. :.. .. :. : .: .::.: : . :::::::::::: ::
CCDS30 MTMETQMSQNVCPRNLW--LLQPLTVLLLLASADSQAAPPKAVLKLEPPWI
10 20 30 40
60 70 80 90 100 110
pF1KE1 NVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTS
::::::::::::.:..::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTS
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE1 LSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDP
:::::::::::::::::::::::::::::.::::::::::::::::::::::.:::. ::
CCDS30 LSDPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDP
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 NFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPS---SSPMGIIVAVVTGIAVAA
.::::::::::::::::::::::::.::::::::::.:: ::::::::::: . ::::
CCDS30 TFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE1 IVAAVVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLM
::::::::::::::::::
CCDS30 IVAAVVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMT
230 240 250 260 270 280
>>CCDS44264.1 FCGR2A gene_id:2212|Hs108|chr1 (317 aa)
initn: 1211 init1: 1153 opt: 1327 Z-score: 1301.7 bits: 249.0 E(32554): 3.5e-66
Smith-Waterman score: 1327; 88.5% identity (95.1% similar) in 226 aa overlap (32-254:23-248)
10 20 30 40 50 60
pF1KE1 GILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWINV
:..:.:: . . :::::::::::: ::::
CCDS44 MTMETQMSQNVCPRNLWLLQPLTVLLLLASADSQAAAPPKAVLKLEPPWINV
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 LQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLS
::::::::::.:..::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 DPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNF
:::::::::::::::::::::::::::.::::::::::::::::::::::.:::. ::.:
CCDS44 DPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTF
120 130 140 150 160 170
190 200 210 220 230
pF1KE1 SIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPS---SSPMGIIVAVVTGIAVAAIV
:::::::::::::::::::::::.::::::::::.:: ::::::::::: . ::::::
CCDS44 SIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAAIV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 AAVVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHP
::::::::::::::::
CCDS44 AAVVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLN
240 250 260 270 280 290
>>CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1 (233 aa)
initn: 670 init1: 600 opt: 607 Z-score: 603.4 bits: 119.4 E(32554): 2.8e-27
Smith-Waterman score: 607; 48.9% identity (74.2% similar) in 190 aa overlap (25-214:2-190)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
: ..:: ::.:.:. .. ::::. ::::: .
CCDS41 MW-QLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYS
10 20 30
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::..::::: :.:..:::..: ::::: ::: .... . :. :::::: :::. ..:
CCDS41 VLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::.: : ::.::.:. :.: . : :::::::. : :::..::::..:. . . .
CCDS41 SDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSD
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
: ::.:. . ::.: : : .: ::. :.::.
CCDS41 FHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFSPPGYQVSFCLVMV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
CCDS41 LLFAVDTGLYFSVKTNI
220 230
>>CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1 (269 aa)
initn: 670 init1: 600 opt: 607 Z-score: 602.6 bits: 119.4 E(32554): 3e-27
Smith-Waterman score: 607; 48.9% identity (74.2% similar) in 190 aa overlap (25-214:38-226)
10 20 30 40 50
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKL
: ..:: ::.:.:. .. ::::. :
CCDS58 RLFTPSCLVGLVPLGLRISLVTCPLQCGIMW-QLLLPTALLLLVSAGMRTEDLPKAVVFL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 EPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQ
:::: .::..::::: :.:..:::..: ::::: ::: .... . :. :::::: ::
CCDS58 EPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 TGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKF
:. ..:::::.: : ::.::.:. :.: . : :::::::. : :::..::::..:.
CCDS58 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 SRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAV
. . .: ::.:. . ::.: : : .: ::. :.::.
CCDS58 FHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFSPPGYQVS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 AAIVAAVVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSL
CCDS58 FCLVMVLLFAVDTGLYFSVKTNI
250 260
>>CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1 (254 aa)
initn: 652 init1: 582 opt: 589 Z-score: 585.4 bits: 116.2 E(32554): 2.8e-26
Smith-Waterman score: 589; 47.9% identity (73.7% similar) in 190 aa overlap (25-214:2-190)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
: ..:: ::.:.:. .. ::::. :::::
CCDS44 MW-QLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYR
10 20 30
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::..::::: :.:..:::..: ::::: .:: .... . :. .::::: :::. ..:
CCDS44 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::.: : ::.::.:. :.: . : :::::::. : :::..::::..:. . . .
CCDS44 SDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSD
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
: ::.:. . ::.: : : .: ::. :.::.
CCDS44 FYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
CCDS44 LLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
220 230 240 250
>>CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1 (290 aa)
initn: 634 init1: 582 opt: 589 Z-score: 584.7 bits: 116.2 E(32554): 3e-26
Smith-Waterman score: 589; 47.9% identity (73.7% similar) in 190 aa overlap (25-214:38-226)
10 20 30 40 50
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKL
: ..:: ::.:.:. .. ::::. :
CCDS12 RLFTSSCLVGLVPLGLRISLVTCPLQCGIMW-QLLLPTALLLLVSAGMRTEDLPKAVVFL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 EPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQ
:::: ::..::::: :.:..:::..: ::::: .:: .... . :. .::::: ::
CCDS12 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 TGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKF
:. ..:::::.: : ::.::.:. :.: . : :::::::. : :::..::::..:.
CCDS12 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 SRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAV
. . .: ::.:. . ::.: : : .: ::. :.::.
CCDS12 FHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 AAIVAAVVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSL
CCDS12 FCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
250 260 270 280 290
>>CCDS72961.1 FCGR3B gene_id:2215|Hs108|chr1 (216 aa)
initn: 655 init1: 585 opt: 585 Z-score: 582.4 bits: 115.4 E(32554): 4.1e-26
Smith-Waterman score: 585; 51.5% identity (76.0% similar) in 167 aa overlap (48-214:7-173)
20 30 40 50 60 70
pF1KE1 DCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWINVLQEDSVTLTCRGTHSP
::::. ::::: .::..::::: :.:..::
CCDS72 MRTEDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSP
10 20 30
80 90 100 110 120 130
pF1KE1 ESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQT
:..: ::::: ::: .... . :. :::::: :::. ..:::::.: : ::.::.
CCDS72 EDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQA
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE1 PHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCT
:. :.: . : :::::::. : :::..::::..:. . . .: ::.:. . ::.: :
CCDS72 PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCR
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE1 GNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAAVVALIYCRKKRISALPG
: .: ::. :.::.
CCDS72 GLVGSKNVSSETVNITITQGLAVSTISSFSPPGYQVSFCLVMVLLFAVDTGLYFSVKTNI
160 170 180 190 200 210
310 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:07:25 2016 done: Mon Nov 7 00:07:25 2016
Total Scan time: 2.720 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]