FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1420, 209 aa
  1>>>pF1KE1420 209 - 209 aa - 209 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.4917+/-0.0008; mu= -2.8822+/- 0.048
 mean_var=256.0159+/-51.970, 0's: 0 Z-trim(117.6): 24  B-trim: 176 in 1/52
 Lambda= 0.080157
 statistics sampled from 18379 (18403) to 18379 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.852), E-opt: 0.2 (0.565), width:  16
 Scan time:  2.530

The best scores are:                                      opt bits E(32554)
CCDS12734.1 FGF21 gene_id:26291|Hs108|chr19        ( 209) 1445 178.6 2.4e-45


>>CCDS12734.1 FGF21 gene_id:26291|Hs108|chr19             (209 aa)
 initn: 1445 init1: 1445 opt: 1445  Z-score: 927.7  bits: 178.6 E(32554): 2.4e-45
Smith-Waterman score: 1445; 99.5% identity (99.5% similar) in 209 aa overlap (1-209:1-209)

               10        20        30        40        50        60
pF1KE1 MDSDETGFEHSGLWVSVLAGLLLGACQAHPIPDSSPLLQFGGQVRQRYLYTDDAQQTEAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MDSDETGFEHSGLWVSVLAGLLLGACQAHPIPDSSPLLQFGGQVRQRYLYTDDAQQTEAH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LEIREDGTVGGAADQSPESLLQLKALKPGVIQILGVKTSRFLCQRPDGALYGSLHFDPEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LEIREDGTVGGAADQSPESLLQLKALKPGVIQILGVKTSRFLCQRPDGALYGSLHFDPEA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 CSFRELLLEDGYNVYQSEAHGLPLHLPGNKSPHRDPAPRGPARFLPLPGLPPAPPEPPGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS12 CSFRELLLEDGYNVYQSEAHGLPLHLPGNKSPHRDPAPRGPARFLPLPGLPPALPEPPGI
              130       140       150       160       170       180

              190       200         
pF1KE1 LAPQPPDVGSSDPLSMVGPSQGRSPSYAS
       :::::::::::::::::::::::::::::
CCDS12 LAPQPPDVGSSDPLSMVGPSQGRSPSYAS
              190       200         




209 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 22:46:34 2016 done: Sun Nov  6 22:46:34 2016
 Total Scan time:  2.530 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]