Result of FASTA (ccds) for
pFN21AE1402
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1402, 599 aa
1>>>pF1KE1402 599 - 599 aa - 599 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7546+/-0.000871; mu= 17.1463+/- 0.053
mean_var=87.7900+/-16.802, 0's: 0 Z-trim(108.4): 57 B-trim: 10 in 1/50
Lambda= 0.136884
statistics sampled from 10143 (10196) to 10143 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.313), width: 16
Scan time: 2.450
The best scores are: opt bits E(32554)
CCDS6842.1 PTGS1 gene_id:5742|Hs108|chr9 ( 599) 4161 832.0 0
CCDS59521.1 PTGS1 gene_id:5742|Hs108|chr9 ( 490) 3353 672.4 3.7e-193
CCDS75895.1 PTGS1 gene_id:5742|Hs108|chr9 ( 551) 2980 598.8 6.1e-171
CCDS6843.1 PTGS1 gene_id:5742|Hs108|chr9 ( 562) 2799 563.0 3.5e-160
CCDS1371.1 PTGS2 gene_id:5743|Hs108|chr1 ( 604) 2660 535.6 6.9e-152
CCDS59520.1 PTGS1 gene_id:5742|Hs108|chr9 ( 537) 2607 525.1 8.9e-149
>>CCDS6842.1 PTGS1 gene_id:5742|Hs108|chr9 (599 aa)
initn: 4161 init1: 4161 opt: 4161 Z-score: 4442.4 bits: 832.0 E(32554): 0
Smith-Waterman score: 4161; 99.8% identity (99.8% similar) in 599 aa overlap (1-599:1-599)
10 20 30 40 50 60
pF1KE1 MSRSLLLRFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQGICVRFGLDRYQCDCTR
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 MSRSLLLWFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQGICVRFGLDRYQCDCTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 TGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 NLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 NLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 LLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 YQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 YQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 ATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 DPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 DPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 LVDAFSRQIAGRIGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 LVDAFSRQIAGRIGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQEL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 VGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 VGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICS
490 500 510 520 530 540
550 560 570 580 590
pF1KE1 PEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 PEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
550 560 570 580 590
>>CCDS59521.1 PTGS1 gene_id:5742|Hs108|chr9 (490 aa)
initn: 3353 init1: 3353 opt: 3353 Z-score: 3581.3 bits: 672.4 E(32554): 3.7e-193
Smith-Waterman score: 3353; 100.0% identity (100.0% similar) in 490 aa overlap (110-599:1-490)
80 90 100 110 120 130
pF1KE1 SLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRSNLIPSPPTYNSAHDYISWE
::::::::::::::::::::::::::::::
CCDS59 MLMRLVLTVRSNLIPSPPTYNSAHDYISWE
10 20 30
140 150 160 170 180 190
pF1KE1 SFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRFLLRRKFIPDPQGTNLMFAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRFLLRRKFIPDPQGTNLMFAF
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE1 FAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQVLDGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQVLDGE
100 110 120 130 140 150
260 270 280 290 300 310
pF1KE1 MYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATLWLREHNRVCDLLKAEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATLWLREHNRVCDLLKAEH
160 170 180 190 200 210
320 330 340 350 360 370
pF1KE1 PTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGVQFQYRNRIAME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGVQFQYRNRIAME
220 230 240 250 260 270
380 390 400 410 420 430
pF1KE1 FNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEALVDAFSRQIAGRIGGGRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEALVDAFSRQIAGRIGGGRNM
280 290 300 310 320 330
440 450 460 470 480 490
pF1KE1 DHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQELVGEKEMAAELEELYGDIDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQELVGEKEMAAELEELYGDIDA
340 350 360 370 380 390
500 510 520 530 540 550
pF1KE1 LEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICSPEYWKPSTFGGEVGFNIVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICSPEYWKPSTFGGEVGFNIVK
400 410 420 430 440 450
560 570 580 590
pF1KE1 TATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
::::::::::::::::::::::::::::::::::::::::
CCDS59 TATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
460 470 480 490
>>CCDS75895.1 PTGS1 gene_id:5742|Hs108|chr9 (551 aa)
initn: 2970 init1: 2970 opt: 2980 Z-score: 3182.5 bits: 598.8 E(32554): 6.1e-171
Smith-Waterman score: 3718; 91.8% identity (91.8% similar) in 599 aa overlap (1-599:1-551)
10 20 30 40 50 60
pF1KE1 MSRSLLLRFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQGICVRFGLDRYQCDCTR
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MSRSLLLWFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQGICVRFGLDRYQCDCTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 TGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLT---
70 80 90 100 110
130 140 150 160 170 180
pF1KE1 NLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRF
:::::::::::::::
CCDS75 ---------------------------------------------GKKQLPDAQLLARRF
120 130
190 200 210 220 230 240
pF1KE1 LLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQ
140 150 160 170 180 190
250 260 270 280 290 300
pF1KE1 YQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLY
200 210 220 230 240 250
310 320 330 340 350 360
pF1KE1 ATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKF
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE1 DPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEA
320 330 340 350 360 370
430 440 450 460 470 480
pF1KE1 LVDAFSRQIAGRIGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LVDAFSRQIAGRIGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQEL
380 390 400 410 420 430
490 500 510 520 530 540
pF1KE1 VGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICS
440 450 460 470 480 490
550 560 570 580 590
pF1KE1 PEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
500 510 520 530 540 550
>>CCDS6843.1 PTGS1 gene_id:5742|Hs108|chr9 (562 aa)
initn: 2799 init1: 2799 opt: 2799 Z-score: 2989.2 bits: 563.0 E(32554): 3.5e-160
Smith-Waterman score: 3842; 93.7% identity (93.7% similar) in 599 aa overlap (1-599:1-562)
10 20 30 40 50 60
pF1KE1 MSRSLLLRFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQGICVRFGLDRYQCDCTR
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 MSRSLLLWFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQGICVRFGLDRYQCDCTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 TGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 NLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 NLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 LLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 YQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 YQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 ATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 DPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEA
:::::::::::::::::::::::::::::::::::
CCDS68 DPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFK-------------------------
370 380 390
430 440 450 460 470 480
pF1KE1 LVDAFSRQIAGRIGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQEL
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 ------------IGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQEL
400 410 420 430 440
490 500 510 520 530 540
pF1KE1 VGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 VGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICS
450 460 470 480 490 500
550 560 570 580 590
pF1KE1 PEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS68 PEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
510 520 530 540 550 560
>>CCDS1371.1 PTGS2 gene_id:5743|Hs108|chr1 (604 aa)
initn: 2362 init1: 2362 opt: 2660 Z-score: 2840.4 bits: 535.6 E(32554): 6.9e-152
Smith-Waterman score: 2660; 64.7% identity (87.5% similar) in 552 aa overlap (33-583:19-570)
10 20 30 40 50 60
pF1KE1 RSLLLRFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQGICVRFGLDRYQCDCTRTG
:::: .:::..:.:. :.:.:.:::::::
CCDS13 MLARALLLCAVLALSHTANPCCSHPCQNRGVCMSVGFDQYKCDCTRTG
10 20 30 40
70 80 90 100 110 120
pF1KE1 YSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNAT-FIREMLMRLVLTVRSN
. : ::. : . : .. :.:.:. .:..::: . ::. :: :.:. .: ::: ::.
CCDS13 FYGENCSTPEFLTRIKLFLKPTPNTVHYILTHFKGFWNVVNNIPFLRNAIMSYVLTSRSH
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 LIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRFL
:: ::::::. . : :::.:::.::::: :: :: :::::.:.::::::::.. .....:
CCDS13 LIDSPPTYNADYGYKSWEAFSNLSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEKLL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 LRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQY
:::::::::::.:.::::::::::::::::. : ::.::..:::::::.::::..: ::
CCDS13 LRRKFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPAFTNGLGHGVDLNHIYGETLARQR
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE1 QLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYA
.::::::::.:::..:::::::.:... . : :: .: . ..:::::::::.::::.::
CCDS13 KLRLFKDGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEHLRFAVGQEVFGLVPGLMMYA
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE1 TLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKFD
:.::::::::::.:: ::: :::::::::.::::::::::::::.:::.:::: ..::::
CCDS13 TIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFD
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE1 PELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEAL
:::::. ::::.:::: ::: :::::::.::.:.. .:.:.:.::..:.:.:...:. .
CCDS13 PELLFNKQFQYQNRIAAEFNTLYHWHPLLPDTFQIHDQKYNYQQFIYNNSILLEHGITQF
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE1 VDAFSRQIAGRIGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQELV
:..:.::::::..::::. . .:. : .::.:. : :::::::: .::: ::.::.
CCDS13 VESFTRQIAGRVAGGRNVPPAVQKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELT
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE1 GEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICSP
:::::.:::: :::::::.:.::.::.:: .:..::::.:.:.:::::::::.:: ::::
CCDS13 GEKEMSAELEALYGDIDAVELYPALLVEKPRPDAIFGETMVEVGAPFSLKGLMGNVICSP
470 480 490 500 510 520
550 560 570 580 590
pF1KE1 EYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
:::::::::::::.:..::....:.: :.: ::..:: :::
CCDS13 AYWKPSTFGGEVGFQIINTASIQSLICNNVKGCPFTSFSVPDPELIKTVTINASSSRSGL
530 540 550 560 570 580
CCDS13 DDINPTVLLKERSTEL
590 600
>>CCDS59520.1 PTGS1 gene_id:5742|Hs108|chr9 (537 aa)
initn: 2601 init1: 2601 opt: 2607 Z-score: 2784.5 bits: 525.1 E(32554): 8.9e-149
Smith-Waterman score: 3650; 93.0% identity (93.2% similar) in 571 aa overlap (29-599:4-537)
10 20 30 40 50 60
pF1KE1 MSRSLLLRFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQGICVRFGLDRYQCDCTR
: .::::::::::::::::::::::::::::
CCDS59 MRKPRLMNPCCYYPCQHQGICVRFGLDRYQCDCTR
10 20 30
70 80 90 100 110 120
pF1KE1 TGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 TGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRS
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE1 NLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDAQLLARRF
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE1 LLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE1 YQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 YQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLY
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE1 ATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKF
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE1 DPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEA
:::::::::::::::::::::::::::::::::::
CCDS59 DPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFK-------------------------
340 350 360 370
430 440 450 460 470 480
pF1KE1 LVDAFSRQIAGRIGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQEL
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ------------IGGGRNMDHHILHVAVDVIRESREMRLQPFNEYRKRFGMKPYTSFQEL
380 390 400 410
490 500 510 520 530 540
pF1KE1 VGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEIGAPFSLKGLLGNPICS
420 430 440 450 460 470
550 560 570 580 590
pF1KE1 PEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL
480 490 500 510 520 530
599 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:30:36 2016 done: Sun Nov 6 22:30:36 2016
Total Scan time: 2.450 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]