Result of FASTA (ccds) for
pFN21AE1365
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1365, 390 aa
1>>>pF1KE1365 390 - 390 aa - 390 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6425+/-0.000852; mu= 7.3761+/- 0.051
mean_var=159.4148+/-31.988, 0's: 0 Z-trim(112.8): 68 B-trim: 4 in 1/52
Lambda= 0.101580
statistics sampled from 13426 (13491) to 13426 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.414), width: 16
Scan time: 3.140
The best scores are: opt bits E(32554)
CCDS34657.1 NCF1 gene_id:653361|Hs108|chr7 ( 390) 2646 399.3 3.1e-111
CCDS78084.1 SH3PXD2B gene_id:285590|Hs108|chr5 ( 430) 722 117.4 2.5e-26
CCDS34291.1 SH3PXD2B gene_id:285590|Hs108|chr5 ( 911) 722 117.6 4.5e-26
CCDS31278.1 SH3PXD2A gene_id:9644|Hs108|chr10 (1105) 517 87.7 5.7e-17
>>CCDS34657.1 NCF1 gene_id:653361|Hs108|chr7 (390 aa)
initn: 2646 init1: 2646 opt: 2646 Z-score: 2110.6 bits: 399.3 E(32554): 3.1e-111
Smith-Waterman score: 2646; 100.0% identity (100.0% similar) in 390 aa overlap (1-390:1-390)
10 20 30 40 50 60
pF1KE1 MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 EAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCSTLMSLPTKISRCPHLLDFFKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCSTLMSLPTKISRCPHLLDFFKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALSTG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 EGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 RRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSK
310 320 330 340 350 360
370 380 390
pF1KE1 PQPAVPPRPSADLILNRCSESTKRKLASAV
::::::::::::::::::::::::::::::
CCDS34 PQPAVPPRPSADLILNRCSESTKRKLASAV
370 380 390
>>CCDS78084.1 SH3PXD2B gene_id:285590|Hs108|chr5 (430 aa)
initn: 730 init1: 237 opt: 722 Z-score: 586.2 bits: 117.4 E(32554): 2.5e-26
Smith-Waterman score: 738; 34.9% identity (64.8% similar) in 381 aa overlap (6-368:7-368)
10 20 30 40 50
pF1KE1 MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFP
: .. .: .:: ::..::::.. : :.. : ...:::........ . . ::
CCDS78 MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 IEAGAINPENRIIPHLPAPKWFDGQR---AAENRQGTLTEYCSTLMSLPTKISRCPHLLD
.:.: .:..:::: ::. : .. .: .: . :::..:..:: ::.: ..:.
CCDS78 MEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FFKVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMA
::..::.::. : ... : .. : .:..: :..:. : ..:::.: .::..
CCDS78 FFETRPEDLNPPKEEHIGKKKS-----GGDQTSVD---PMVLEQYVVVANYQKQESSEIS
130 140 150 160 170
180 190 200 210 220 230
pF1KE1 LSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKA
::.:.::...::.:::::: . ..::.::. :: :. .. . .:. : :..:
CCDS78 LSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEE-EKYTVIYP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 YTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK-SGQDVSQAQRQIK
::: . ::..: .: .::::.: :.::: :: . :. :. ::.: ::. . :
CCDS78 YTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPP-----K
240 250 260 270 280
300 310 320 330 340 350
pF1KE1 RGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQR--RRQARPGPQSPG---SPL
: : : .: .. ::. :.: :.. . .:: : ..:: :.. . ::
CCDS78 PG--PGSPSHPGALDLDGVSRQ---QNAVGREKELLSSQRDGRFEGRPVPDGDAKQRSPK
290 300 310 320 330 340
360 370 380 390
pF1KE1 EEERQTQRSK---------PQPAVPPRPSADLILNRCSESTKRKLASAV
..: : :.: .::.
CCDS78 MRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEDHKNV
350 360 370 380 390 400
>>CCDS34291.1 SH3PXD2B gene_id:285590|Hs108|chr5 (911 aa)
initn: 783 init1: 237 opt: 722 Z-score: 581.6 bits: 117.6 E(32554): 4.5e-26
Smith-Waterman score: 738; 34.9% identity (64.8% similar) in 381 aa overlap (6-368:7-368)
10 20 30 40 50
pF1KE1 MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFP
: .. .: .:: ::..::::.. : :.. : ...:::........ . . ::
CCDS34 MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 IEAGAINPENRIIPHLPAPKWFDGQR---AAENRQGTLTEYCSTLMSLPTKISRCPHLLD
.:.: .:..:::: ::. : .. .: .: . :::..:..:: ::.: ..:.
CCDS34 MEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FFKVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMA
::..::.::. : ... : .. : .:..: :..:. : ..:::.: .::..
CCDS34 FFETRPEDLNPPKEEHIGKKKS-----GGDQTSVD---PMVLEQYVVVANYQKQESSEIS
130 140 150 160 170
180 190 200 210 220 230
pF1KE1 LSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKA
::.:.::...::.:::::: . ..::.::. :: :. .. . .:. : :..:
CCDS34 LSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEE-EKYTVIYP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 YTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK-SGQDVSQAQRQIK
::: . ::..: .: .::::.: :.::: :: . :. :. ::.: ::. . :
CCDS34 YTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPP-----K
240 250 260 270 280
300 310 320 330 340 350
pF1KE1 RGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQR--RRQARPGPQSPG---SPL
: : : .: .. ::. :.: :.. . .:: : ..:: :.. . ::
CCDS34 PG--PGSPSHPGALDLDGVSRQ---QNAVGREKELLSSQRDGRFEGRPVPDGDAKQRSPK
290 300 310 320 330 340
360 370 380 390
pF1KE1 EEERQTQRSK---------PQPAVPPRPSADLILNRCSESTKRKLASAV
..: : :.: .::.
CCDS34 MRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKN
350 360 370 380 390 400
>>CCDS31278.1 SH3PXD2A gene_id:9644|Hs108|chr10 (1105 aa)
initn: 714 init1: 254 opt: 517 Z-score: 418.1 bits: 87.7 E(32554): 5.7e-17
Smith-Waterman score: 714; 35.5% identity (69.4% similar) in 301 aa overlap (6-294:6-306)
10 20 30 40 50 60
pF1KE1 MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPI
.. ... ::: ::.::::.. : :.: . ...:::........ : . :::
CCDS31 MLAYCVQDATVVDVEKRRNPSKHYVYIINVTWSDSTSQTIYRRYSKFFDLQMQLLDKFPI
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 EAGAINPENRIIPHLPAPKWFDGQR---AAENRQGTLTEYCSTLMSLPTKISRCPHLLDF
:.: .:..:::: ::. : .. .: .: . ::: .:. :: .::.: ... :
CCDS31 EGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLKPIDEYCRALVRLPPHISQCDEVFRF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FKVRPDDLKLPT-DNQTKKPETYLMPKDGKSTATDITG------PIILQTYRAIANYEKT
:..::.:.. : : ..: .. . . ..: :.:: :.::. : ...::.:
CCDS31 FEARPEDVNPPKEDYGSSKRKSVWLSSWAESPKKDVTGADATAEPMILEQYVVVSNYKKQ
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 SGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEP
.::..:..:.::.:.::.:::::: . . ..::.::..:: .. . : . . .::
CCDS31 ENSELSLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEE
190 200 210 220 230 240
240 250 260 270 280
pF1KE1 --YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVS
::... ::. ::... .: .::::.: :.::: :: :. :. ::.:. .:.
CCDS31 EKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKDDLP
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE1 QAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGS
....
CCDS31 TRKKNLAGPVEIIGNIMEISNLLNKKASGDKETPPAEGEGHEAPIAKKEISLPILCNASN
310 320 330 340 350 360
390 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:22:47 2016 done: Sun Nov 6 23:22:47 2016
Total Scan time: 3.140 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]