Result of FASTA (omim) for
pFN21AE1348
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1348, 472 aa
1>>>pF1KE1348 472 - 472 aa - 472 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8928+/-0.000487; mu= 20.1010+/- 0.030
mean_var=64.4231+/-13.621, 0's: 0 Z-trim(108.5): 31 B-trim: 1896 in 2/49
Lambda= 0.159791
statistics sampled from 16579 (16598) to 16579 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.545), E-opt: 0.2 (0.195), width: 16
Scan time: 8.720
The best scores are: opt bits E(85289)
XP_005250771 (OMIM: 173510,608404,610938,611162) P ( 472) 3120 728.6 8.7e-210
NP_001120915 (OMIM: 173510,608404,610938,611162) p ( 472) 3120 728.6 8.7e-210
NP_000063 (OMIM: 173510,608404,610938,611162) plat ( 472) 3120 728.6 8.7e-210
NP_001001548 (OMIM: 173510,608404,610938,611162) p ( 472) 3120 728.6 8.7e-210
NP_001001547 (OMIM: 173510,608404,610938,611162) p ( 472) 3120 728.6 8.7e-210
XP_005250770 (OMIM: 173510,608404,610938,611162) P ( 472) 3120 728.6 8.7e-210
XP_005250772 (OMIM: 173510,608404,610938,611162) P ( 472) 3120 728.6 8.7e-210
NP_001120916 (OMIM: 173510,608404,610938,611162) p ( 472) 3120 728.6 8.7e-210
NP_001276840 (OMIM: 173510,608404,610938,611162) p ( 396) 2610 611.0 1.9e-174
NP_001276838 (OMIM: 173510,608404,610938,611162) p ( 412) 1797 423.6 5e-118
NP_001276837 (OMIM: 173510,608404,610938,611162) p ( 433) 1535 363.2 8e-100
NP_001076428 (OMIM: 601040,610762) scavenger recep ( 506) 970 233.0 1.5e-60
NP_005496 (OMIM: 601040,610762) scavenger receptor ( 509) 970 233.0 1.5e-60
NP_005497 (OMIM: 254900,602257) lysosome membrane ( 478) 957 230.0 1.1e-59
NP_001191184 (OMIM: 254900,602257) lysosome membra ( 335) 570 140.7 6.1e-33
>>XP_005250771 (OMIM: 173510,608404,610938,611162) PREDI (472 aa)
initn: 3120 init1: 3120 opt: 3120 Z-score: 3887.4 bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
370 380 390 400 410 420
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
430 440 450 460 470
>>NP_001120915 (OMIM: 173510,608404,610938,611162) plate (472 aa)
initn: 3120 init1: 3120 opt: 3120 Z-score: 3887.4 bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
370 380 390 400 410 420
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
430 440 450 460 470
>>NP_000063 (OMIM: 173510,608404,610938,611162) platelet (472 aa)
initn: 3120 init1: 3120 opt: 3120 Z-score: 3887.4 bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
370 380 390 400 410 420
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
430 440 450 460 470
>>NP_001001548 (OMIM: 173510,608404,610938,611162) plate (472 aa)
initn: 3120 init1: 3120 opt: 3120 Z-score: 3887.4 bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
370 380 390 400 410 420
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
430 440 450 460 470
>>NP_001001547 (OMIM: 173510,608404,610938,611162) plate (472 aa)
initn: 3120 init1: 3120 opt: 3120 Z-score: 3887.4 bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
370 380 390 400 410 420
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
430 440 450 460 470
>>XP_005250770 (OMIM: 173510,608404,610938,611162) PREDI (472 aa)
initn: 3120 init1: 3120 opt: 3120 Z-score: 3887.4 bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
370 380 390 400 410 420
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
430 440 450 460 470
>>XP_005250772 (OMIM: 173510,608404,610938,611162) PREDI (472 aa)
initn: 3120 init1: 3120 opt: 3120 Z-score: 3887.4 bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
370 380 390 400 410 420
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
430 440 450 460 470
>>NP_001120916 (OMIM: 173510,608404,610938,611162) plate (472 aa)
initn: 3120 init1: 3120 opt: 3120 Z-score: 3887.4 bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
370 380 390 400 410 420
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
430 440 450 460 470
>>NP_001276840 (OMIM: 173510,608404,610938,611162) plate (396 aa)
initn: 2610 init1: 2610 opt: 2610 Z-score: 3253.0 bits: 611.0 E(85289): 1.9e-174
Smith-Waterman score: 2610; 100.0% identity (100.0% similar) in 396 aa overlap (77-472:1-396)
50 60 70 80 90 100
pF1KE1 GTIAFKNWVKTGTEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQD
::::::::::::::::::::::::::::::
NP_001 MMNSSNIQVKQRGPYTYRVRFLAKENVTQD
10 20 30
110 120 130 140 150 160
pF1KE1 AEDNTVSFLQPNGAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEDNTVSFLQPNGAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSK
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE1 SSMFQVRTLRELLWGYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSMFQVRTLRELLWGYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAI
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE1 IDTYKGKRNLSYWESHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDTYKGKRNLSYWESHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLK
160 170 180 190 200 210
290 300 310 320 330 340
pF1KE1 GIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHF
220 230 240 250 260 270
350 360 370 380 390 400
pF1KE1 LYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLK
280 290 300 310 320 330
410 420 430 440 450 460
pF1KE1 RNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCAC
340 350 360 370 380 390
470
pF1KE1 RSKTIK
::::::
NP_001 RSKTIK
>>NP_001276838 (OMIM: 173510,608404,610938,611162) plate (412 aa)
initn: 2711 init1: 1791 opt: 1797 Z-score: 2239.9 bits: 423.6 E(85289): 5e-118
Smith-Waterman score: 2595; 87.3% identity (87.3% similar) in 472 aa overlap (1-472:1-412)
10 20 30 40 50 60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
:::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVA-------------------------------------
130 140
190 200 210 220 230 240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
:::::::::::::::::::::::::::::::::::::
NP_001 -----------------------YNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
150 160 170 180
250 260 270 280 290 300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
190 200 210 220 230 240
310 320 330 340 350 360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
250 260 270 280 290 300
370 380 390 400 410 420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
310 320 330 340 350 360
430 440 450 460 470
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
370 380 390 400 410
472 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:09:19 2016 done: Mon Nov 7 02:09:21 2016
Total Scan time: 8.720 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]