Result of FASTA (ccds) for
pFN21AE1341
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1341, 166 aa
1>>>pF1KE1341 166 - 166 aa - 166 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4269+/-0.000865; mu= 11.4898+/- 0.052
mean_var=76.4810+/-15.356, 0's: 0 Z-trim(107.3): 66 B-trim: 2 in 1/51
Lambda= 0.146655
statistics sampled from 9447 (9515) to 9447 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.292), width: 16
Scan time: 1.800
The best scores are: opt bits E(32554)
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 ( 166) 1086 238.8 1.1e-63
CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 ( 169) 831 184.9 2e-47
CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 ( 226) 763 170.6 5.5e-43
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 ( 173) 743 166.3 8.3e-42
CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 ( 175) 692 155.5 1.5e-38
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 ( 171) 634 143.2 7.2e-35
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 ( 177) 634 143.2 7.4e-35
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 ( 172) 626 141.5 2.3e-34
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 ( 172) 621 140.5 4.9e-34
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 318 76.3 8.6e-15
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 318 76.3 8.6e-15
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 318 76.3 8.6e-15
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 306 73.8 5e-14
>>CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 (166 aa)
initn: 1086 init1: 1086 opt: 1086 Z-score: 1256.5 bits: 238.8 E(32554): 1.1e-63
Smith-Waterman score: 1086; 100.0% identity (100.0% similar) in 166 aa overlap (1-166:1-166)
10 20 30 40 50 60
pF1KE1 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVR
70 80 90 100 110 120
130 140 150 160
pF1KE1 EMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
130 140 150 160
>>CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 (169 aa)
initn: 797 init1: 797 opt: 831 Z-score: 964.8 bits: 184.9 E(32554): 2e-47
Smith-Waterman score: 831; 71.9% identity (92.8% similar) in 167 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE1 MAPKKAKKRA-GGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRV
::::.::.:. :..:.:::::.::::::::::::..::::::.:::.::::::::.::.
CCDS10 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 NVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYV
::::::.: :.::: ::::::::::::::::::::::..: .::::.::::::..: ..
CCDS10 NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFL
70 80 90 100 110 120
120 130 140 150 160
pF1KE1 REMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
.:.:::: .:::.::. .:.::::::: ::.::::. ..::::. ::
CCDS10 EELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE
130 140 150 160
>>CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 (226 aa)
initn: 804 init1: 761 opt: 763 Z-score: 885.3 bits: 170.6 E(32554): 5.5e-43
Smith-Waterman score: 814; 66.7% identity (77.3% similar) in 198 aa overlap (4-166:29-226)
10 20 30
pF1KE1 MAPKKAKKRA-GGANSNVFSMFEQTQIQEFKE---
..:.::: : :.:::::::.:.:::::::
CCDS34 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
10 20 30 40 50 60
40 50 60
pF1KE1 -------------------------------AFTIMDQNRDGFIDKNDLRDTFAALGRVN
:::::::::::::::.:::::::::::.:
CCDS34 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
70 80 90 100 110 120
70 80 90 100 110 120
pF1KE1 VKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVR
:::::.. :.::::::::::::::::::::::.:::::::.:::::: :::: .::: ..
CCDS34 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
130 140 150 160 170 180
130 140 150 160
pF1KE1 EMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
: : :::.:::.::: :::::::::: :::::.:: ..::::::::
CCDS34 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
190 200 210 220
>>CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 (173 aa)
initn: 779 init1: 722 opt: 743 Z-score: 864.1 bits: 166.3 E(32554): 8.3e-42
Smith-Waterman score: 743; 64.0% identity (86.6% similar) in 172 aa overlap (1-166:1-172)
10 20 30 40 50
pF1KE1 MAPKKAKKRAGGA------NSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFA
:: .:.::. ::: .::::: ::::::::::::::.:::::::::::.::.::.:
CCDS43 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 ALGRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVL
.::..:::..:.: :.::: ::::::.::..:::::.:.: :::::::::..::.::: .
CCDS43 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI
70 80 90 100 110 120
120 130 140 150 160
pF1KE1 KADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
. .:....: .::.... ::::::: ::.:::::: : ..:::::::.
CCDS43 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE
130 140 150 160 170
>>CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 (175 aa)
initn: 716 init1: 680 opt: 692 Z-score: 805.7 bits: 155.5 E(32554): 1.5e-38
Smith-Waterman score: 692; 62.7% identity (87.0% similar) in 161 aa overlap (6-166:14-174)
10 20 30 40 50
pF1KE1 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDT
: :.: ..:::::::::.:::::::::. .::::::.: : :::.:
CCDS54 MASRKAGTRGKVAATKQAQRGSSNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRET
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 FAALGRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKG
.. ::.:.: .::.: :..:. ::::::::::.:::::.:.::::.::.::..::: :::
CCDS54 YSQLGKVSVPEEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKG
70 80 90 100 110 120
120 130 140 150 160
pF1KE1 VLKADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
:.. : ...: :::..:: ::.:::: : :..::.:::.: .:::::.::.
CCDS54 VVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE
130 140 150 160 170
>>CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 (171 aa)
initn: 627 init1: 388 opt: 634 Z-score: 739.5 bits: 143.2 E(32554): 7.2e-35
Smith-Waterman score: 634; 57.7% identity (84.7% similar) in 163 aa overlap (5-166:9-170)
10 20 30 40 50
pF1KE1 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAAL
:.::: :.::::.::.:.:::::::::...::::::::::.::.: .:.:
CCDS11 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 GRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKA
:. : .: .: :..:::::::::.:::::::::.:.:::..: ::: :: :. :...
CCDS11 GK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
70 80 90 100 110
120 130 140 150 160
pF1KE1 DYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHG-EEKD
::.::.:::...::. ::::... : : ::..: ....:. :: ..::
CCDS11 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
120 130 140 150 160 170
>>CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 (177 aa)
initn: 627 init1: 388 opt: 634 Z-score: 739.3 bits: 143.2 E(32554): 7.4e-35
Smith-Waterman score: 634; 57.7% identity (84.7% similar) in 163 aa overlap (5-166:15-176)
10 20 30 40 50
pF1KE1 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLR
:.::: :.::::.::.:.:::::::::...::::::::::.::.
CCDS77 MDLTTTMSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DTFAALGRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEG
: .:.::. : .: .: :..:::::::::.:::::::::.:.:::..: ::: :: :.
CCDS77 DMLASLGK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEA
70 80 90 100 110
120 130 140 150 160
pF1KE1 KGVLKADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHG-EEKD
:... ::.::.:::...::. ::::... : : ::..: ....:. :: ..::
CCDS77 TGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
120 130 140 150 160 170
>>CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 (172 aa)
initn: 617 init1: 379 opt: 626 Z-score: 730.3 bits: 141.5 E(32554): 2.3e-34
Smith-Waterman score: 626; 56.7% identity (83.5% similar) in 164 aa overlap (4-166:9-171)
10 20 30 40 50
pF1KE1 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAA
: .::: :.::::.::.:.:::::::::...::::::::::.::.: .:.
CCDS11 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 LGRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLK
::. : . .: :..:::::::::.:::::::::.:.:::..: ::: :: :. :...
CCDS11 LGK-NPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQ
70 80 90 100 110
120 130 140 150 160
pF1KE1 ADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHG-EEKD
::.::.:::...::. ::::... : : ::..: ....:. :: ..::
CCDS11 EDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
120 130 140 150 160 170
>>CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 (172 aa)
initn: 614 init1: 376 opt: 621 Z-score: 724.6 bits: 140.5 E(32554): 4.9e-34
Smith-Waterman score: 621; 56.7% identity (84.1% similar) in 164 aa overlap (4-166:9-171)
10 20 30 40 50
pF1KE1 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAA
: .::: :.::::.::.:.:::::::::...::::::::::.::.: .:.
CCDS13 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 LGRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLK
::. : .: .. :..:::::::::.:::::::::.:.:::..: ::: :: :..: ..
CCDS13 LGK-NPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIH
70 80 90 100 110
120 130 140 150 160
pF1KE1 ADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHG-EEKD
:..::.:::...::. ::::.:. : : ::..: ....:. :: ..::
CCDS13 EDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
120 130 140 150 160 170
>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa)
initn: 269 init1: 175 opt: 318 Z-score: 379.0 bits: 76.3 E(32554): 8.6e-15
Smith-Waterman score: 318; 38.0% identity (73.2% similar) in 142 aa overlap (23-160:7-147)
10 20 30 40 50 60
pF1KE1 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVN
. :: ::::::...:.. :: : ..: .. .::. :
CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-N
10 20 30 40
70 80 90 100 110
pF1KE1 VKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKA
. :...::.:. : :.: ::::...:.: .: :: : .::.::: .:.: ..:
CCDS18 PTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISA
50 60 70 80 90 100
120 130 140 150 160
pF1KE1 DYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
.:...:. .:... ::::.:. : :...:...:...:
CCDS18 AELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
110 120 130 140
166 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:51:16 2016 done: Sun Nov 6 22:51:16 2016
Total Scan time: 1.800 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]