Result of FASTA (omim) for
pFN21AE1232
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1232, 365 aa
1>>>pF1KE1232 365 - 365 aa - 365 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5617+/-0.000427; mu= 13.1177+/- 0.027
mean_var=382.9333+/-89.752, 0's: 0 Z-trim(118.9): 1412 B-trim: 0 in 0/52
Lambda= 0.065541
statistics sampled from 30315 (32313) to 30315 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.732), E-opt: 0.2 (0.379), width: 16
Scan time: 5.670
The best scores are: opt bits E(85289)
NP_002088 (OMIM: 600860) transcription factor IIIA ( 365) 2580 258.3 2e-68
NP_001311076 (OMIM: 314995) zinc finger protein 41 ( 779) 469 59.3 3.4e-08
NP_001311079 (OMIM: 314995) zinc finger protein 41 ( 779) 469 59.3 3.4e-08
NP_001311073 (OMIM: 314995) zinc finger protein 41 ( 779) 469 59.3 3.4e-08
NP_001311069 (OMIM: 314995) zinc finger protein 41 ( 779) 469 59.3 3.4e-08
NP_700359 (OMIM: 314995) zinc finger protein 41 is ( 779) 469 59.3 3.4e-08
NP_009061 (OMIM: 314995) zinc finger protein 41 is ( 779) 469 59.3 3.4e-08
XP_016885306 (OMIM: 314995) PREDICTED: zinc finger ( 779) 469 59.3 3.4e-08
NP_001311084 (OMIM: 314995) zinc finger protein 41 ( 821) 469 59.4 3.4e-08
NP_001247415 (OMIM: 604086) zinc finger protein 15 ( 538) 461 58.3 4.8e-08
NP_003436 (OMIM: 604086) zinc finger protein 155 i ( 538) 461 58.3 4.8e-08
XP_005259272 (OMIM: 604086) PREDICTED: zinc finger ( 538) 461 58.3 4.8e-08
NP_932355 (OMIM: 604086) zinc finger protein 155 i ( 538) 461 58.3 4.8e-08
NP_001247416 (OMIM: 604086) zinc finger protein 15 ( 538) 461 58.3 4.8e-08
XP_011525580 (OMIM: 604086) PREDICTED: zinc finger ( 549) 461 58.3 4.9e-08
XP_016882737 (OMIM: 604086) PREDICTED: zinc finger ( 549) 461 58.3 4.9e-08
NP_001247417 (OMIM: 604086) zinc finger protein 15 ( 549) 461 58.3 4.9e-08
XP_011525581 (OMIM: 604086) PREDICTED: zinc finger ( 549) 461 58.3 4.9e-08
XP_016881642 (OMIM: 604750) PREDICTED: zinc finger ( 502) 457 57.8 6.1e-08
XP_016881641 (OMIM: 604750) PREDICTED: zinc finger ( 502) 457 57.8 6.1e-08
XP_016881640 (OMIM: 604750) PREDICTED: zinc finger ( 669) 457 58.1 6.9e-08
XP_016881639 (OMIM: 604750) PREDICTED: zinc finger ( 688) 457 58.1 7e-08
XP_006723037 (OMIM: 604750) PREDICTED: zinc finger ( 700) 457 58.1 7e-08
NP_006621 (OMIM: 604750) zinc finger protein 234 [ ( 700) 457 58.1 7e-08
XP_016881638 (OMIM: 604750) PREDICTED: zinc finger ( 700) 457 58.1 7e-08
NP_001138296 (OMIM: 604750) zinc finger protein 23 ( 700) 457 58.1 7e-08
NP_001243583 (OMIM: 603972) zinc finger protein 43 ( 744) 453 57.8 9.4e-08
NP_001243580 (OMIM: 603972) zinc finger protein 43 ( 744) 453 57.8 9.4e-08
XP_016873753 (OMIM: 602187) PREDICTED: zinc finger ( 489) 450 57.1 9.5e-08
NP_001243577 (OMIM: 603972) zinc finger protein 43 ( 803) 453 57.8 9.7e-08
XP_016882699 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_016882705 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
NP_001243578 (OMIM: 603972) zinc finger protein 43 ( 803) 453 57.8 9.7e-08
NP_001243579 (OMIM: 603972) zinc finger protein 43 ( 803) 453 57.8 9.7e-08
XP_016882698 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_016882697 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_011526559 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_011526561 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_016882701 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_016882696 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_016882704 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_016882703 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_016882702 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
XP_016882700 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08
NP_003414 (OMIM: 603972) zinc finger protein 43 is ( 809) 453 57.8 9.7e-08
NP_001243582 (OMIM: 603972) zinc finger protein 43 ( 818) 453 57.9 9.8e-08
XP_016873755 (OMIM: 602187) PREDICTED: zinc finger ( 530) 450 57.2 9.9e-08
XP_016873754 (OMIM: 602187) PREDICTED: zinc finger ( 530) 450 57.2 9.9e-08
NP_775802 (OMIM: 603982) zinc finger protein 100 [ ( 542) 450 57.2 1e-07
XP_016873756 (OMIM: 602187) PREDICTED: zinc finger ( 553) 450 57.2 1e-07
>>NP_002088 (OMIM: 600860) transcription factor IIIA [Ho (365 aa)
initn: 2580 init1: 2580 opt: 2580 Z-score: 1349.5 bits: 258.3 E(85289): 2e-68
Smith-Waterman score: 2580; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365)
10 20 30 40 50 60
pF1KE1 MDPPAVVAESVSSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MDPPAVVAESVSSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LCKHTGERPFVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LCKHTGERPFVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 FERKHENQQKQYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FERKHENQQKQYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 RHAKAHEGYVCQKGCSFVAKTWTELLKHVRETHKEEILCEVCRKTFKRKDYLKQHMKTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RHAKAHEGYVCQKGCSFVAKTWTELLKHVRETHKEEILCEVCRKTFKRKDYLKQHMKTHA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 PERDVCRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PERDVCRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 HDPDKKKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 HDPDKKKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVA
310 320 330 340 350 360
pF1KE1 VLTLG
:::::
NP_002 VLTLG
>>NP_001311076 (OMIM: 314995) zinc finger protein 41 iso (779 aa)
initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08
Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735)
20 30 40 50 60 70
pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV
:: ::. ...: .: .: ::::.:..
NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI
440 450 460 470 480 490
80 90 100 110 120 130
pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ
: :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. :
NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP
500 510 520 530 540 550
140 150 160 170 180
pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG---
: :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : :
NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP
560 570 580 590 600
190 200 210 220 230 240
pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV
::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. ..
NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI
610 620 630 640 650 660
250 260 270 280 290 300
pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK
: ::...: :: .: ..: . .:. : . :::::. :. :. : : ..
NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER
670 680 690 700 710
310 320 330 340 350 360
pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG
. : :. ... :
NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
720 730 740 750 760 770
>>NP_001311079 (OMIM: 314995) zinc finger protein 41 iso (779 aa)
initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08
Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735)
20 30 40 50 60 70
pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV
:: ::. ...: .: .: ::::.:..
NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI
440 450 460 470 480 490
80 90 100 110 120 130
pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ
: :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. :
NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP
500 510 520 530 540 550
140 150 160 170 180
pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG---
: :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : :
NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP
560 570 580 590 600
190 200 210 220 230 240
pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV
::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. ..
NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI
610 620 630 640 650 660
250 260 270 280 290 300
pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK
: ::...: :: .: ..: . .:. : . :::::. :. :. : : ..
NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER
670 680 690 700 710
310 320 330 340 350 360
pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG
. : :. ... :
NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
720 730 740 750 760 770
>>NP_001311073 (OMIM: 314995) zinc finger protein 41 iso (779 aa)
initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08
Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735)
20 30 40 50 60 70
pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV
:: ::. ...: .: .: ::::.:..
NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI
440 450 460 470 480 490
80 90 100 110 120 130
pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ
: :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. :
NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP
500 510 520 530 540 550
140 150 160 170 180
pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG---
: :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : :
NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP
560 570 580 590 600
190 200 210 220 230 240
pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV
::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. ..
NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI
610 620 630 640 650 660
250 260 270 280 290 300
pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK
: ::...: :: .: ..: . .:. : . :::::. :. :. : : ..
NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER
670 680 690 700 710
310 320 330 340 350 360
pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG
. : :. ... :
NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
720 730 740 750 760 770
>>NP_001311069 (OMIM: 314995) zinc finger protein 41 iso (779 aa)
initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08
Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735)
20 30 40 50 60 70
pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV
:: ::. ...: .: .: ::::.:..
NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI
440 450 460 470 480 490
80 90 100 110 120 130
pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ
: :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. :
NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP
500 510 520 530 540 550
140 150 160 170 180
pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG---
: :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : :
NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP
560 570 580 590 600
190 200 210 220 230 240
pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV
::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. ..
NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI
610 620 630 640 650 660
250 260 270 280 290 300
pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK
: ::...: :: .: ..: . .:. : . :::::. :. :. : : ..
NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER
670 680 690 700 710
310 320 330 340 350 360
pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG
. : :. ... :
NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
720 730 740 750 760 770
>>NP_700359 (OMIM: 314995) zinc finger protein 41 isofor (779 aa)
initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08
Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735)
20 30 40 50 60 70
pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV
:: ::. ...: .: .: ::::.:..
NP_700 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI
440 450 460 470 480 490
80 90 100 110 120 130
pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ
: :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. :
NP_700 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP
500 510 520 530 540 550
140 150 160 170 180
pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG---
: :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : :
NP_700 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP
560 570 580 590 600
190 200 210 220 230 240
pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV
::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. ..
NP_700 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI
610 620 630 640 650 660
250 260 270 280 290 300
pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK
: ::...: :: .: ..: . .:. : . :::::. :. :. : : ..
NP_700 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER
670 680 690 700 710
310 320 330 340 350 360
pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG
. : :. ... :
NP_700 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
720 730 740 750 760 770
>>NP_009061 (OMIM: 314995) zinc finger protein 41 isofor (779 aa)
initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08
Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735)
20 30 40 50 60 70
pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV
:: ::. ...: .: .: ::::.:..
NP_009 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI
440 450 460 470 480 490
80 90 100 110 120 130
pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ
: :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. :
NP_009 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP
500 510 520 530 540 550
140 150 160 170 180
pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG---
: :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : :
NP_009 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP
560 570 580 590 600
190 200 210 220 230 240
pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV
::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. ..
NP_009 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI
610 620 630 640 650 660
250 260 270 280 290 300
pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK
: ::...: :: .: ..: . .:. : . :::::. :. :. : : ..
NP_009 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER
670 680 690 700 710
310 320 330 340 350 360
pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG
. : :. ... :
NP_009 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
720 730 740 750 760 770
>>XP_016885306 (OMIM: 314995) PREDICTED: zinc finger pro (779 aa)
initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08
Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735)
20 30 40 50 60 70
pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV
:: ::. ...: .: .: ::::.:..
XP_016 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI
440 450 460 470 480 490
80 90 100 110 120 130
pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ
: :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. :
XP_016 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP
500 510 520 530 540 550
140 150 160 170 180
pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG---
: :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : :
XP_016 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP
560 570 580 590 600
190 200 210 220 230 240
pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV
::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. ..
XP_016 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI
610 620 630 640 650 660
250 260 270 280 290 300
pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK
: ::...: :: .: ..: . .:. : . :::::. :. :. : : ..
XP_016 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER
670 680 690 700 710
310 320 330 340 350 360
pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG
. : :. ... :
XP_016 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
720 730 740 750 760 770
>>NP_001311084 (OMIM: 314995) zinc finger protein 41 iso (821 aa)
initn: 225 init1: 122 opt: 469 Z-score: 268.0 bits: 59.4 E(85289): 3.4e-08
Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:511-777)
20 30 40 50 60 70
pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV
:: ::. ...: .: .: ::::.:..
NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI
490 500 510 520 530
80 90 100 110 120 130
pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ
: :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. :
NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP
540 550 560 570 580 590
140 150 160 170 180
pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG---
: :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : :
NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP
600 610 620 630 640
190 200 210 220 230 240
pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV
::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. ..
NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI
650 660 670 680 690 700
250 260 270 280 290 300
pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK
: ::...: :: .: ..: . .:. : . :::::. :. :. : : ..
NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER
710 720 730 740 750
310 320 330 340 350 360
pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG
. : :. ... :
NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
760 770 780 790 800 810
>>NP_001247415 (OMIM: 604086) zinc finger protein 155 is (538 aa)
initn: 486 init1: 123 opt: 461 Z-score: 265.4 bits: 58.3 E(85289): 4.8e-08
Smith-Waterman score: 528; 33.8% identity (58.8% similar) in 311 aa overlap (40-344:232-516)
10 20 30 40 50 60
pF1KE1 SVSSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERP
: : .:. ..:. :..: ::::.:
NP_001 KLFMCDVCGKEFSQSSHLQTHQRVHTGEKPFKCE--QCGKGFSRRSALNVHRKLHTGEKP
210 220 230 240 250
70 80 90 100 110 120
pF1KE1 FVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQ
..: :.::::::.: .:..: ::::::: : . : . : .: ::.: : ..
NP_001 YIC--EACGKAFIHDSQLKEHKRIHTGEKPFKC--DICGKTFYFRSRLKSH-SMVHTGE-
260 270 280 290 300 310
130 140 150 160 170 180
pF1KE1 KQYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG-
: . : . : :.:.... :. : ::.: ..: : ::: : . . .: .: :
NP_001 KPFRC--DTCDKSFHQRSALNRHCMVHTGEKPYRCEQ--CGKGFIGRLDFYKHQVVHTGE
320 330 340 350 360
190 200 210 220 230 240
pF1KE1 --YVCQK-GCSFVAKTWTE-LLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER
: :.. : :: :. ::.: : .. .. . :: : : : .. :..:...:. :.
NP_001 KPYNCKECGKSF---RWSSCLLNHQRVHSGEKSFKCEECGKGFYTNSQLSSHQRSHSGEK
370 380 390 400 410 420
250 260 270 280 290 300
pF1KE1 DVCRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDP
.: : ::. :.: :::. : : ::. :.. :::.:. .:. : .:
NP_001 PY-KC--EECGKGYVTKFNLDLH-QRVHTGERPYNCKE--CGKNFSRASSILNHKRLHC-
430 440 450 460 470
310 320 330 340 350 360
pF1KE1 DKKKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLT
.:: .: . .: :. . :. .:.. : :..
NP_001 QKKPFKCEDCGKR----LVHRTYRKDQPRDYSGENPSKCEDCGRRYKRRLNLDILLSLFL
480 490 500 510 520 530
pF1KE1 LG
NP_001 NDT
365 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:35:27 2016 done: Sun Nov 6 21:35:28 2016
Total Scan time: 5.670 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]