Result of FASTA (omim) for
pFN21AE1220
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1220, 241 aa
1>>>pF1KE1220 241 - 241 aa - 241 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3516+/-0.000312; mu= 20.5306+/- 0.020
mean_var=71.5783+/-14.263, 0's: 0 Z-trim(116.7): 202 B-trim: 0 in 0/51
Lambda= 0.151595
statistics sampled from 27878 (28091) to 27878 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.329), width: 16
Scan time: 6.760
The best scores are: opt bits E(85289)
NP_997228 (OMIM: 612252) C-type lectin domain fami ( 241) 1678 375.5 4.4e-104
NP_922938 (OMIM: 606264,613108,614079) C-type lect ( 247) 325 79.6 5.4e-15
NP_002534 (OMIM: 602601,608446) oxidized low-densi ( 273) 321 78.8 1.1e-14
XP_011518872 (OMIM: 612088) PREDICTED: C-type lect ( 265) 315 77.5 2.6e-14
XP_005253381 (OMIM: 612088) PREDICTED: C-type lect ( 265) 315 77.5 2.6e-14
NP_612210 (OMIM: 612088) C-type lectin domain fami ( 265) 315 77.5 2.6e-14
NP_001193939 (OMIM: 612088) C-type lectin domain f ( 275) 315 77.5 2.6e-14
XP_006719096 (OMIM: 612088) PREDICTED: C-type lect ( 282) 315 77.5 2.7e-14
NP_963917 (OMIM: 612088) C-type lectin domain fami ( 232) 306 75.5 9.2e-14
XP_011518873 (OMIM: 612088) PREDICTED: C-type lect ( 249) 306 75.5 9.6e-14
NP_922941 (OMIM: 606264,613108,614079) C-type lect ( 168) 291 72.0 7.2e-13
NP_072092 (OMIM: 606264,613108,614079) C-type lect ( 201) 291 72.1 8.1e-13
NP_031386 (OMIM: 611817) NKG2-D type II integral m ( 216) 278 69.3 6.1e-12
NP_057595 (OMIM: 606782) C-type lectin domain fami ( 280) 279 69.6 6.2e-12
XP_005272529 (OMIM: 604672,607948,609423,614371) P ( 266) 272 68.1 1.7e-11
XP_011518987 (OMIM: 606783) PREDICTED: C-type lect ( 196) 269 67.3 2.2e-11
NP_001092901 (OMIM: 606783) C-type lectin domain f ( 196) 269 67.3 2.2e-11
XP_016874885 (OMIM: 606783) PREDICTED: C-type lect ( 173) 265 66.3 3.8e-11
XP_016874884 (OMIM: 606783) PREDICTED: C-type lect ( 229) 265 66.5 4.6e-11
NP_057593 (OMIM: 606783) C-type lectin domain fami ( 229) 265 66.5 4.6e-11
XP_005253439 (OMIM: 606783) PREDICTED: C-type lect ( 229) 265 66.5 4.6e-11
NP_031360 (OMIM: 602894) natural killer cells anti ( 148) 262 65.6 5.4e-11
NP_001107868 (OMIM: 602894) natural killer cells a ( 179) 262 65.7 6.1e-11
NP_002253 (OMIM: 602894) natural killer cells anti ( 179) 262 65.7 6.1e-11
XP_016874780 (OMIM: 602894) PREDICTED: natural kil ( 179) 262 65.7 6.1e-11
NP_001284677 (OMIM: 606782) C-type lectin domain f ( 247) 262 65.9 7.6e-11
NP_001284679 (OMIM: 606782) C-type lectin domain f ( 192) 256 64.4 1.6e-10
NP_001284680 (OMIM: 606782) C-type lectin domain f ( 192) 256 64.4 1.6e-10
NP_001287659 (OMIM: 612088) C-type lectin domain f ( 213) 254 64.0 2.3e-10
XP_006719099 (OMIM: 612088) PREDICTED: C-type lect ( 230) 254 64.1 2.4e-10
XP_011518875 (OMIM: 612088) PREDICTED: C-type lect ( 231) 254 64.1 2.4e-10
XP_006719098 (OMIM: 612088) PREDICTED: C-type lect ( 232) 254 64.1 2.4e-10
NP_001138366 (OMIM: 604672,607948,609423,614371) C ( 360) 251 63.6 5.1e-10
NP_001138368 (OMIM: 604672,607948,609423,614371) C ( 380) 251 63.7 5.3e-10
NP_066978 (OMIM: 604672,607948,609423,614371) CD20 ( 404) 251 63.7 5.5e-10
NP_001284678 (OMIM: 606782) C-type lectin domain f ( 188) 247 62.4 6.1e-10
XP_016874778 (OMIM: 602894) PREDICTED: natural kil ( 188) 246 62.2 7.1e-10
XP_016874776 (OMIM: 602894) PREDICTED: natural kil ( 219) 246 62.3 7.9e-10
XP_011518989 (OMIM: 606782) PREDICTED: C-type lect ( 307) 247 62.7 8.5e-10
NP_001138365 (OMIM: 604672,607948,609423,614371) C ( 268) 246 62.4 9e-10
NP_001138371 (OMIM: 604672,607948,609423,614371) C ( 243) 245 62.1 9.8e-10
NP_001138367 (OMIM: 604672,607948,609423,614371) C ( 312) 246 62.5 1e-09
NP_001138378 (OMIM: 605872) C-type lectin domain f ( 263) 244 62.0 1.2e-09
NP_001138379 (OMIM: 605872) C-type lectin domain f ( 332) 243 61.9 1.6e-09
XP_006722677 (OMIM: 605872) PREDICTED: C-type lect ( 343) 237 60.6 4.2e-09
NP_001138376 (OMIM: 605872) C-type lectin domain f ( 348) 237 60.6 4.2e-09
NP_001138381 (OMIM: 605872) C-type lectin domain f ( 353) 237 60.6 4.2e-09
XP_006719130 (OMIM: 602894) PREDICTED: natural kil ( 185) 234 59.6 4.4e-09
XP_016874779 (OMIM: 602894) PREDICTED: natural kil ( 185) 234 59.6 4.4e-09
XP_011518953 (OMIM: 602894) PREDICTED: natural kil ( 186) 234 59.6 4.4e-09
>>NP_997228 (OMIM: 612252) C-type lectin domain family 9 (241 aa)
initn: 1678 init1: 1678 opt: 1678 Z-score: 1989.5 bits: 375.5 E(85289): 4.4e-104
Smith-Waterman score: 1678; 100.0% identity (100.0% similar) in 241 aa overlap (1-241:1-241)
10 20 30 40 50 60
pF1KE1 MHEEEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLVMVISCVFCMGLLTASIFLGVKLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 MHEEEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLVMVISCVFCMGLLTASIFLGVKLLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VSTIAMQQQEKLIQQERALLNFTEWKRSCALQMKYCQAFMQNSLSSAHNSSPCPNNWIQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 VSTIAMQQQEKLIQQERALLNFTEWKRSCALQMKYCQAFMQNSLSSAHNSSPCPNNWIQN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 RESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFICEKYALRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 GHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFICEKYALRSS
190 200 210 220 230 240
pF1KE1 V
:
NP_997 V
>>NP_922938 (OMIM: 606264,613108,614079) C-type lectin d (247 aa)
initn: 308 init1: 171 opt: 325 Z-score: 390.2 bits: 79.6 E(85289): 5.4e-15
Smith-Waterman score: 325; 26.8% identity (59.4% similar) in 239 aa overlap (3-234:11-243)
10 20 30 40 50
pF1KE1 MHEEEIYTSLQWDSPAPDTYQKCLSSNKCSGACC--LVMVISCVFCMGLLTA
.:. ::.:..:: . ...:... :. :: ..:. .:.
NP_922 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 SIFLGVKLLQVSTIAMQQQEKLIQQERALLNFTEWKRSCALQMKYCQAFMQNSLSSAHNS
.. ::. . :. . . :. : : .. .: ... . . ... :
NP_922 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQS---SLEDSVTPTKAVKTTGVLS
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 SPCPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGS
:::: ::: ..::: : . : :...: . ::.::.:.:..:. :: .......
NP_922 SPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFI---VKQVSSQ
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 YD--YWVGLSQDGHSGRWLWQDGSSPSPGLLPAERS---QSANQVCGYVKSNSLLSSNCS
: .:.:::. :::.:::. : .:. . . .. . : ... . . .. ::
NP_922 PDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCS
180 190 200 210 220 230
230 240
pF1KE1 TWKYFICEKYALRSSV
. .: ::::
NP_922 VPSYSICEKKFSM
240
>>NP_002534 (OMIM: 602601,608446) oxidized low-density l (273 aa)
initn: 382 init1: 170 opt: 321 Z-score: 385.0 bits: 78.8 E(85289): 1.1e-14
Smith-Waterman score: 356; 29.7% identity (58.6% similar) in 239 aa overlap (34-239:36-272)
10 20 30 40 50 60
pF1KE1 EEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLVMVISCVFCMGLLTASIFLGVKLLQVST
::. . :.:.::... . ::..: :::
NP_002 LKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQLSQVSD
10 20 30 40 50 60
70 80 90
pF1KE1 IAMQQQEKLIQQERALLN------------------FTEWKRSCA----------LQMKY
. :.: .: .:.. : . . : .. : .....
NP_002 LLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQMELHH
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 CQAFMQNSLSSAHN-SSPCPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESK
. .:..:. . : :.:::..:: . :.:: : :. :::.::. . ::.:.:
NP_002 QNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINST
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE1 EEMDFITGSLRKIKGSYDYWVGLSQDGHSGRWLWQDGSSPSPGLLPAER--SQS-ANQVC
..::: .. .:. .:.:::. . : :::.::: : :. .. ::. . .:
NP_002 ADLDFIQQAIS--YSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTC
190 200 210 220 230 240
220 230 240
pF1KE1 GYVKSNSLLSSNCSTWKYFICEKYA-LRSSV
.:.. ... . :: . ::.: : ::.
NP_002 AYIQRGAVYAENCILAAFSICQKKANLRAQ
250 260 270
>>XP_011518872 (OMIM: 612088) PREDICTED: C-type lectin d (265 aa)
initn: 283 init1: 164 opt: 315 Z-score: 378.0 bits: 77.5 E(85289): 2.6e-14
Smith-Waterman score: 316; 29.9% identity (61.2% similar) in 214 aa overlap (34-236:50-252)
10 20 30 40 50
pF1KE1 EEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLVMVISCVFCMGLLTASIF---LGV---K
::...:. .:.: ::.: : . :
XP_011 KIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIG----LGVL-ASMFHVTLKIEMKK
20 30 40 50 60 70
60 70 80 90 100 110
pF1KE1 LLQVSTIAMQQQEKLIQQERALLNFTEWKR--SCALQM---KYCQAFMQNSLSSAHNSSP
. ....:. . :... : . .:... : : .:: : :. .. : . :. .:
XP_011 MNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELY--SKEQEHKCKP
80 90 100 110 120 130
120 130 140 150 160 170
pF1KE1 CPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYD
:: :: ...:::..:. . :. :. : ....::.:..:. ..:: .. : :::
XP_011 CPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKSQSR----SYD
140 150 160 170 180
180 190 200 210 220 230
pF1KE1 YWVGLSQDGHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFIC
::.::: . : : . :. : . . . . :. :::.. . .:. : .::
XP_011 YWLGLSPEEDSTRGMRVDNIINSSAWVIRNAPDLNNMYCGYINRLYVQYYHCTYKKRMIC
190 200 210 220 230 240
240
pF1KE1 EKYALRSSV
::.:
XP_011 EKMANPVQLGSTYFREA
250 260
>>XP_005253381 (OMIM: 612088) PREDICTED: C-type lectin d (265 aa)
initn: 283 init1: 164 opt: 315 Z-score: 378.0 bits: 77.5 E(85289): 2.6e-14
Smith-Waterman score: 316; 29.9% identity (61.2% similar) in 214 aa overlap (34-236:50-252)
10 20 30 40 50
pF1KE1 EEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLVMVISCVFCMGLLTASIF---LGV---K
::...:. .:.: ::.: : . :
XP_005 KIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIG----LGVL-ASMFHVTLKIEMKK
20 30 40 50 60 70
60 70 80 90 100 110
pF1KE1 LLQVSTIAMQQQEKLIQQERALLNFTEWKR--SCALQM---KYCQAFMQNSLSSAHNSSP
. ....:. . :... : . .:... : : .:: : :. .. : . :. .:
XP_005 MNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELY--SKEQEHKCKP
80 90 100 110 120 130
120 130 140 150 160 170
pF1KE1 CPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYD
:: :: ...:::..:. . :. :. : ....::.:..:. ..:: .. : :::
XP_005 CPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKSQSR----SYD
140 150 160 170 180
180 190 200 210 220 230
pF1KE1 YWVGLSQDGHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFIC
::.::: . : : . :. : . . . . :. :::.. . .:. : .::
XP_005 YWLGLSPEEDSTRGMRVDNIINSSAWVIRNAPDLNNMYCGYINRLYVQYYHCTYKKRMIC
190 200 210 220 230 240
240
pF1KE1 EKYALRSSV
::.:
XP_005 EKMANPVQLGSTYFREA
250 260
>>NP_612210 (OMIM: 612088) C-type lectin domain family 1 (265 aa)
initn: 283 init1: 164 opt: 315 Z-score: 378.0 bits: 77.5 E(85289): 2.6e-14
Smith-Waterman score: 316; 29.9% identity (61.2% similar) in 214 aa overlap (34-236:50-252)
10 20 30 40 50
pF1KE1 EEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLVMVISCVFCMGLLTASIF---LGV---K
::...:. .:.: ::.: : . :
NP_612 KIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIG----LGVL-ASMFHVTLKIEMKK
20 30 40 50 60 70
60 70 80 90 100 110
pF1KE1 LLQVSTIAMQQQEKLIQQERALLNFTEWKR--SCALQM---KYCQAFMQNSLSSAHNSSP
. ....:. . :... : . .:... : : .:: : :. .. : . :. .:
NP_612 MNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELY--SKEQEHKCKP
80 90 100 110 120 130
120 130 140 150 160 170
pF1KE1 CPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYD
:: :: ...:::..:. . :. :. : ....::.:..:. ..:: .. : :::
NP_612 CPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKSQSR----SYD
140 150 160 170 180
180 190 200 210 220 230
pF1KE1 YWVGLSQDGHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFIC
::.::: . : : . :. : . . . . :. :::.. . .:. : .::
NP_612 YWLGLSPEEDSTRGMRVDNIINSSAWVIRNAPDLNNMYCGYINRLYVQYYHCTYKKRMIC
190 200 210 220 230 240
240
pF1KE1 EKYALRSSV
::.:
NP_612 EKMANPVQLGSTYFREA
250 260
>>NP_001193939 (OMIM: 612088) C-type lectin domain famil (275 aa)
initn: 283 init1: 164 opt: 315 Z-score: 377.8 bits: 77.5 E(85289): 2.6e-14
Smith-Waterman score: 316; 29.9% identity (61.2% similar) in 214 aa overlap (34-236:60-262)
10 20 30 40 50
pF1KE1 EEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLVMVISCVFCMGLLTASIF---LGV---K
::...:. .:.: ::.: : . :
NP_001 KIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIG----LGVL-ASMFHVTLKIEMKK
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE1 LLQVSTIAMQQQEKLIQQERALLNFTEWKR--SCALQM---KYCQAFMQNSLSSAHNSSP
. ....:. . :... : . .:... : : .:: : :. .. : . :. .:
NP_001 MNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELY--SKEQEHKCKP
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE1 CPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYD
:: :: ...:::..:. . :. :. : ....::.:..:. ..:: .. : :::
NP_001 CPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKSQSR----SYD
150 160 170 180 190
180 190 200 210 220 230
pF1KE1 YWVGLSQDGHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFIC
::.::: . : : . :. : . . . . :. :::.. . .:. : .::
NP_001 YWLGLSPEEDSTRGMRVDNIINSSAWVIRNAPDLNNMYCGYINRLYVQYYHCTYKKRMIC
200 210 220 230 240 250
240
pF1KE1 EKYALRSSV
::.:
NP_001 EKMANPVQLGSTYFREA
260 270
>>XP_006719096 (OMIM: 612088) PREDICTED: C-type lectin d (282 aa)
initn: 283 init1: 164 opt: 315 Z-score: 377.7 bits: 77.5 E(85289): 2.7e-14
Smith-Waterman score: 316; 29.9% identity (61.2% similar) in 214 aa overlap (34-236:67-269)
10 20 30 40 50
pF1KE1 EEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLVMVISCVFCMGLLTASIF---LGV---K
::...:. .:.: ::.: : . :
XP_006 KIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIG----LGVL-ASMFHVTLKIEMKK
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE1 LLQVSTIAMQQQEKLIQQERALLNFTEWKR--SCALQM---KYCQAFMQNSLSSAHNSSP
. ....:. . :... : . .:... : : .:: : :. .. : . :. .:
XP_006 MNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELY--SKEQEHKCKP
100 110 120 130 140
120 130 140 150 160 170
pF1KE1 CPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYD
:: :: ...:::..:. . :. :. : ....::.:..:. ..:: .. : :::
XP_006 CPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKSQSR----SYD
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE1 YWVGLSQDGHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFIC
::.::: . : : . :. : . . . . :. :::.. . .:. : .::
XP_006 YWLGLSPEEDSTRGMRVDNIINSSAWVIRNAPDLNNMYCGYINRLYVQYYHCTYKKRMIC
210 220 230 240 250 260
240
pF1KE1 EKYALRSSV
::.:
XP_006 EKMANPVQLGSTYFREA
270 280
>>NP_963917 (OMIM: 612088) C-type lectin domain family 1 (232 aa)
initn: 299 init1: 164 opt: 306 Z-score: 368.1 bits: 75.5 E(85289): 9.2e-14
Smith-Waterman score: 306; 29.7% identity (61.6% similar) in 185 aa overlap (57-236:41-219)
30 40 50 60 70 80
pF1KE1 NKCSGACCLVMVISCVFCMGLLTASIFLGVKLLQVSTIAMQQQEKLIQQERALLNFTEWK
:. ....:. . :... : . .:...
NP_963 QFQNSSEMEKIPEIGKFGEKVHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKI
20 30 40 50 60 70
90 100 110 120 130 140
pF1KE1 R--SCALQM---KYCQAFMQNSLSSAHNSSPCPNNWIQNRESCYYVSEIWSIWHTSQENC
: : .:: : :. .. : . :. .::: :: ...:::..:. . :. :. :
NP_963 RNLSTTLQTIATKLCRELY--SKEQEHKCKPCPRRWIWHKDSCYFLSDDVQTWQESKMAC
80 90 100 110 120
150 160 170 180 190 200
pF1KE1 LKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQDGHSGRWLWQDGSSPSPGLLPA
....::.:..:. ..:: .. : :::::.::: . : : . :. : . .
NP_963 AAQNASLLKINNKNALEFIKSQSR----SYDYWLGLSPEEDSTRGMRVDNIINSSAWVIR
130 140 150 160 170 180
210 220 230 240
pF1KE1 ERSQSANQVCGYVKSNSLLSSNCSTWKYFICEKYALRSSV
. . :. :::.. . .:. : .::::.:
NP_963 NAPDLNNMYCGYINRLYVQYYHCTYKKRMICEKMANPVQLGSTYFREA
190 200 210 220 230
>>XP_011518873 (OMIM: 612088) PREDICTED: C-type lectin d (249 aa)
initn: 283 init1: 164 opt: 306 Z-score: 367.7 bits: 75.5 E(85289): 9.6e-14
Smith-Waterman score: 306; 29.7% identity (61.6% similar) in 185 aa overlap (57-236:58-236)
30 40 50 60 70 80
pF1KE1 NKCSGACCLVMVISCVFCMGLLTASIFLGVKLLQVSTIAMQQQEKLIQQERALLNFTEWK
:. ....:. . :... : . .:...
XP_011 QFQNSSEMEKIPEIGKFGEKVHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKI
30 40 50 60 70 80
90 100 110 120 130 140
pF1KE1 R--SCALQM---KYCQAFMQNSLSSAHNSSPCPNNWIQNRESCYYVSEIWSIWHTSQENC
: : .:: : :. .. : . :. .::: :: ...:::..:. . :. :. :
XP_011 RNLSTTLQTIATKLCRELY--SKEQEHKCKPCPRRWIWHKDSCYFLSDDVQTWQESKMAC
90 100 110 120 130 140
150 160 170 180 190 200
pF1KE1 LKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQDGHSGRWLWQDGSSPSPGLLPA
....::.:..:. ..:: .. : :::::.::: . : : . :. : . .
XP_011 AAQNASLLKINNKNALEFIKSQSR----SYDYWLGLSPEEDSTRGMRVDNIINSSAWVIR
150 160 170 180 190 200
210 220 230 240
pF1KE1 ERSQSANQVCGYVKSNSLLSSNCSTWKYFICEKYALRSSV
. . :. :::.. . .:. : .::::.:
XP_011 NAPDLNNMYCGYINRLYVQYYHCTYKKRMICEKMANPVQLGSTYFREA
210 220 230 240
241 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:57:30 2016 done: Sun Nov 6 14:57:31 2016
Total Scan time: 6.760 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]