FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1201, 42 aa
  1>>>pF1KE1201 42 - 42 aa - 42 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 3.9075+/-0.000203; mu= 10.8004+/- 0.013
 mean_var=56.9614+/-11.380, 0's: 0 Z-trim(127.3): 30  B-trim: 555 in 1/57
 Lambda= 0.169935
 statistics sampled from 55477 (55510) to 55477 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.942), E-opt: 0.2 (0.651), width:  16
 Scan time:  3.240

The best scores are:                                      opt bits E(85289)
NP_937861 (OMIM: 275355,601566) inhibitor of growt ( 210)  242 66.1 9.4e-12
NP_937860 (OMIM: 275355,601566) inhibitor of growt ( 235)  242 66.2   1e-11
NP_001254657 (OMIM: 275355,601566) inhibitor of gr ( 262)  242 66.2 1.1e-11
NP_937862 (OMIM: 275355,601566) inhibitor of growt ( 279)  242 66.3 1.1e-11
NP_005528 (OMIM: 275355,601566) inhibitor of growt ( 422)  242 66.5 1.5e-11
XP_011530229 (OMIM: 604215) PREDICTED: inhibitor o ( 225)  230 63.2 7.6e-11
NP_001278888 (OMIM: 604215) inhibitor of growth pr ( 240)  230 63.2 7.9e-11
NP_001555 (OMIM: 604215) inhibitor of growth prote ( 280)  230 63.3 8.7e-11
NP_115705 (OMIM: 608525) inhibitor of growth prote ( 240)  190 53.4 7.1e-08
XP_016860586 (OMIM: 608525) PREDICTED: inhibitor o ( 300)  190 53.5 8.2e-08
XP_016874882 (OMIM: 608524) PREDICTED: inhibitor o ( 196)  176 49.9 6.7e-07
XP_016874881 (OMIM: 608524) PREDICTED: inhibitor o ( 199)  176 49.9 6.7e-07
XP_005253755 (OMIM: 608524) PREDICTED: inhibitor o ( 200)  176 49.9 6.8e-07
XP_011519267 (OMIM: 608524) PREDICTED: inhibitor o ( 222)  176 50.0 7.2e-07
XP_011519266 (OMIM: 608524) PREDICTED: inhibitor o ( 224)  176 50.0 7.3e-07
NP_001121057 (OMIM: 608524) inhibitor of growth pr ( 225)  176 50.0 7.3e-07
NP_001121056 (OMIM: 608524) inhibitor of growth pr ( 245)  176 50.0 7.7e-07
NP_001121055 (OMIM: 608524) inhibitor of growth pr ( 246)  176 50.0 7.7e-07
NP_057246 (OMIM: 608524) inhibitor of growth prote ( 248)  176 50.0 7.8e-07
NP_001121054 (OMIM: 608524) inhibitor of growth pr ( 249)  176 50.0 7.8e-07
NP_061944 (OMIM: 607493) inhibitor of growth prote ( 418)  177 50.5 9.3e-07
NP_001317091 (OMIM: 608525) inhibitor of growth pr ( 226)  139 40.9 0.00039
XP_016860588 (OMIM: 608525) PREDICTED: inhibitor o ( 286)  139 41.0 0.00046
XP_016860587 (OMIM: 608525) PREDICTED: inhibitor o ( 286)  139 41.0 0.00046


>>NP_937861 (OMIM: 275355,601566) inhibitor of growth pr  (210 aa)
 initn: 251 init1: 217 opt: 242  Z-score: 332.0  bits: 66.1 E(85289): 9.4e-12
Smith-Waterman score: 242; 76.9% identity (89.7% similar) in 39 aa overlap (1-38:154-192)

                                              10        20         
pF1KE1                               MIRCDN-ECPIEWFRFSCVSLNHKPKRKWY
                                     :: ::: :::::::.::::.:::::: :::
NP_937 KAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWY
           130       140       150       160       170       180   

      30        40                
pF1KE1 CSRCRGKNDGQSP              
       : .:::.:.                  
NP_937 CPKCRGENEKTMDKALEKSKKERAYNR
           190       200       210

>>NP_937860 (OMIM: 275355,601566) inhibitor of growth pr  (235 aa)
 initn: 251 init1: 217 opt: 242  Z-score: 331.4  bits: 66.2 E(85289): 1e-11
Smith-Waterman score: 242; 76.9% identity (89.7% similar) in 39 aa overlap (1-38:179-217)

                                              10        20         
pF1KE1                               MIRCDN-ECPIEWFRFSCVSLNHKPKRKWY
                                     :: ::: :::::::.::::.:::::: :::
NP_937 KAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWY
      150       160       170       180       190       200        

      30        40                
pF1KE1 CSRCRGKNDGQSP              
       : .:::.:.                  
NP_937 CPKCRGENEKTMDKALEKSKKERAYNR
      210       220       230     

>>NP_001254657 (OMIM: 275355,601566) inhibitor of growth  (262 aa)
 initn: 251 init1: 217 opt: 242  Z-score: 330.9  bits: 66.2 E(85289): 1.1e-11
Smith-Waterman score: 242; 76.9% identity (89.7% similar) in 39 aa overlap (1-38:206-244)

                                              10        20         
pF1KE1                               MIRCDN-ECPIEWFRFSCVSLNHKPKRKWY
                                     :: ::: :::::::.::::.:::::: :::
NP_001 KAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWY
         180       190       200       210       220       230     

      30        40                
pF1KE1 CSRCRGKNDGQSP              
       : .:::.:.                  
NP_001 CPKCRGENEKTMDKALEKSKKERAYNR
         240       250       260  

>>NP_937862 (OMIM: 275355,601566) inhibitor of growth pr  (279 aa)
 initn: 251 init1: 217 opt: 242  Z-score: 330.5  bits: 66.3 E(85289): 1.1e-11
Smith-Waterman score: 242; 76.9% identity (89.7% similar) in 39 aa overlap (1-38:223-261)

                                              10        20         
pF1KE1                               MIRCDN-ECPIEWFRFSCVSLNHKPKRKWY
                                     :: ::: :::::::.::::.:::::: :::
NP_937 KAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWY
            200       210       220       230       240       250  

      30        40                
pF1KE1 CSRCRGKNDGQSP              
       : .:::.:.                  
NP_937 CPKCRGENEKTMDKALEKSKKERAYNR
            260       270         

>>NP_005528 (OMIM: 275355,601566) inhibitor of growth pr  (422 aa)
 initn: 254 init1: 217 opt: 242  Z-score: 328.4  bits: 66.5 E(85289): 1.5e-11
Smith-Waterman score: 242; 76.9% identity (89.7% similar) in 39 aa overlap (1-38:366-404)

                                              10        20         
pF1KE1                               MIRCDN-ECPIEWFRFSCVSLNHKPKRKWY
                                     :: ::: :::::::.::::.:::::: :::
NP_005 KAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWY
         340       350       360       370       380       390     

      30        40                
pF1KE1 CSRCRGKNDGQSP              
       : .:::.:.                  
NP_005 CPKCRGENEKTMDKALEKSKKERAYNR
         400       410       420  

>>XP_011530229 (OMIM: 604215) PREDICTED: inhibitor of gr  (225 aa)
 initn: 237 init1: 199 opt: 230  Z-score: 315.7  bits: 63.2 E(85289): 7.6e-11
Smith-Waterman score: 230; 74.4% identity (87.2% similar) in 39 aa overlap (1-38:170-208)

                                              10        20         
pF1KE1                               MIRCDNE-CPIEWFRFSCVSLNHKPKRKWY
                                     :: :::: ::::::.::::::..::: :::
XP_011 KQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWY
     140       150       160       170       180       190         

      30        40               
pF1KE1 CSRCRGKNDGQSP             
       : .::: :.                 
XP_011 CPKCRGDNEKTMDKSTEKTKKDRRSR
     200       210       220     

>>NP_001278888 (OMIM: 604215) inhibitor of growth protei  (240 aa)
 initn: 237 init1: 199 opt: 230  Z-score: 315.4  bits: 63.2 E(85289): 7.9e-11
Smith-Waterman score: 230; 74.4% identity (87.2% similar) in 39 aa overlap (1-38:185-223)

                                              10        20         
pF1KE1                               MIRCDNE-CPIEWFRFSCVSLNHKPKRKWY
                                     :: :::: ::::::.::::::..::: :::
NP_001 KQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWY
          160       170       180       190       200       210    

      30        40               
pF1KE1 CSRCRGKNDGQSP             
       : .::: :.                 
NP_001 CPKCRGDNEKTMDKSTEKTKKDRRSR
          220       230       240

>>NP_001555 (OMIM: 604215) inhibitor of growth protein 2  (280 aa)
 initn: 237 init1: 199 opt: 230  Z-score: 314.6  bits: 63.3 E(85289): 8.7e-11
Smith-Waterman score: 230; 74.4% identity (87.2% similar) in 39 aa overlap (1-38:225-263)

                                              10        20         
pF1KE1                               MIRCDNE-CPIEWFRFSCVSLNHKPKRKWY
                                     :: :::: ::::::.::::::..::: :::
NP_001 KQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWY
          200       210       220       230       240       250    

      30        40               
pF1KE1 CSRCRGKNDGQSP             
       : .::: :.                 
NP_001 CPKCRGDNEKTMDKSTEKTKKDRRSR
          260       270       280

>>NP_115705 (OMIM: 608525) inhibitor of growth protein 5  (240 aa)
 initn: 188 init1: 165 opt: 190  Z-score: 262.4  bits: 53.4 E(85289): 7.1e-08
Smith-Waterman score: 190; 67.6% identity (85.3% similar) in 34 aa overlap (1-33:199-232)

                                              10        20         
pF1KE1                               MIRCDN-ECPIEWFRFSCVSLNHKPKRKWY
                                     :: ::: .::::::.:.::.:. ::: ::.
NP_115 LSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWF
      170       180       190       200       210       220        

      30        40  
pF1KE1 CSRCRGKNDGQSP
       : ::         
NP_115 CPRCVQEKRKKK 
      230       240 

>>XP_016860586 (OMIM: 608525) PREDICTED: inhibitor of gr  (300 aa)
 initn: 188 init1: 165 opt: 190  Z-score: 261.3  bits: 53.5 E(85289): 8.2e-08
Smith-Waterman score: 190; 67.6% identity (85.3% similar) in 34 aa overlap (1-33:259-292)

                                              10        20         
pF1KE1                               MIRCDN-ECPIEWFRFSCVSLNHKPKRKWY
                                     :: ::: .::::::.:.::.:. ::: ::.
XP_016 LSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWF
      230       240       250       260       270       280        

      30        40  
pF1KE1 CSRCRGKNDGQSP
       : ::         
XP_016 CPRCVQEKRKKK 
      290       300 




42 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 21:45:09 2016 done: Sun Nov  6 21:45:10 2016
 Total Scan time:  3.240 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]