Result of FASTA (omim) for
pFN21AE1179
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1179, 689 aa
1>>>pF1KE1179 689 - 689 aa - 689 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.2547+/-0.000558; mu= -6.6528+/- 0.035
mean_var=689.4402+/-146.326, 0's: 0 Z-trim(122.9): 576 B-trim: 2118 in 2/59
Lambda= 0.048846
statistics sampled from 41181 (41831) to 41181 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.73), E-opt: 0.2 (0.49), width: 16
Scan time: 11.480
The best scores are: opt bits E(85289)
XP_006710428 (OMIM: 120260,600204,603932,614284) P ( 689) 5139 377.7 8.2e-104
NP_001843 (OMIM: 120260,600204,603932,614284) coll ( 689) 5139 377.7 8.2e-104
XP_016855821 (OMIM: 120260,600204,603932,614284) P ( 693) 5121 376.4 2e-103
XP_016855822 (OMIM: 120260,600204,603932,614284) P ( 595) 4455 329.4 2.4e-89
XP_011539017 (OMIM: 120260,600204,603932,614284) P ( 599) 4437 328.1 5.9e-89
XP_011539018 (OMIM: 120260,600204,603932,614284) P ( 599) 4437 328.1 5.9e-89
XP_011539019 (OMIM: 120260,600204,603932,614284) P ( 508) 3764 280.6 1e-74
NP_511040 (OMIM: 120210,614134,614135) collagen al ( 678) 2740 208.6 6.3e-53
NP_001842 (OMIM: 120210,614134,614135) collagen al ( 921) 2723 207.6 1.7e-52
XP_011533732 (OMIM: 120210,614134,614135) PREDICTE ( 688) 2482 190.4 1.9e-47
XP_016865735 (OMIM: 120210,614134,614135) PREDICTE ( 748) 2465 189.3 4.6e-47
XP_011533731 (OMIM: 120210,614134,614135) PREDICTE ( 931) 2465 189.4 5.2e-47
NP_001844 (OMIM: 120270,600969,603932) collagen al ( 684) 2418 185.9 4.3e-46
NP_690848 (OMIM: 610026) collagen alpha-1(XXII) ch (1626) 1998 156.8 5.9e-37
XP_011526847 (OMIM: 120270,600969,603932) PREDICTE ( 552) 1954 153.1 2.6e-36
NP_000081 (OMIM: 120180,130020,130050) collagen al (1466) 1929 151.9 1.6e-35
XP_011508875 (OMIM: 120190,130000) PREDICTED: coll (1453) 1907 150.4 4.7e-35
NP_000384 (OMIM: 120190,130000) collagen alpha-2(V (1499) 1907 150.4 4.8e-35
XP_005257116 (OMIM: 114000,120150,130000,130060,16 (1158) 1887 148.8 1.1e-34
XP_016869755 (OMIM: 120215,130000) PREDICTED: coll (1715) 1876 148.3 2.3e-34
NP_001265003 (OMIM: 120215,130000) collagen alpha- (1838) 1876 148.3 2.4e-34
NP_000084 (OMIM: 120215,130000) collagen alpha-1(V (1838) 1876 148.3 2.4e-34
XP_011522643 (OMIM: 114000,120150,130000,130060,16 (1398) 1855 146.7 5.8e-34
XP_016855826 (OMIM: 120280,154780,228520,603932,60 (1323) 1839 145.5 1.2e-33
NP_542197 (OMIM: 120280,154780,228520,603932,60484 (1690) 1839 145.7 1.4e-33
NP_001177638 (OMIM: 120280,154780,228520,603932,60 (1767) 1839 145.7 1.5e-33
XP_016855825 (OMIM: 120280,154780,228520,603932,60 (1515) 1837 145.5 1.5e-33
NP_001845 (OMIM: 120280,154780,228520,603932,60484 (1806) 1839 145.7 1.5e-33
NP_542196 (OMIM: 120280,154780,228520,603932,60484 (1818) 1839 145.7 1.5e-33
XP_016855824 (OMIM: 120280,154780,228520,603932,60 (1855) 1839 145.7 1.5e-33
XP_016855823 (OMIM: 120280,154780,228520,603932,60 (1857) 1839 145.7 1.5e-33
NP_000079 (OMIM: 114000,120150,130000,130060,16620 (1464) 1826 144.7 2.4e-33
XP_011508874 (OMIM: 120131,203780) PREDICTED: coll (1132) 1809 143.3 4.8e-33
XP_005257115 (OMIM: 114000,120150,130000,130060,16 (1374) 1792 142.2 1.2e-32
XP_011519350 (OMIM: 120130,175780,180000,607595,61 (1605) 1792 142.3 1.4e-32
NP_001836 (OMIM: 120130,175780,180000,607595,61177 (1669) 1792 142.3 1.4e-32
XP_006717371 (OMIM: 608461,615155) PREDICTED: coll (1842) 1771 140.9 4.1e-32
XP_011517440 (OMIM: 608461,615155) PREDICTED: coll (1858) 1771 140.9 4.1e-32
NP_116277 (OMIM: 608461,615155) collagen alpha-1(X (1860) 1771 140.9 4.1e-32
NP_000080 (OMIM: 120160,130060,166210,166220,16671 (1366) 1763 140.2 5.1e-32
XP_011517446 (OMIM: 608461,615155) PREDICTED: coll (1352) 1762 140.1 5.3e-32
XP_011517445 (OMIM: 608461,615155) PREDICTED: coll (1353) 1762 140.1 5.3e-32
XP_016882338 (OMIM: 120216) PREDICTED: collagen al ( 966) 1754 139.3 6.4e-32
XP_016883155 (OMIM: 120270,600969,603932) PREDICTE ( 486) 1741 138.0 8e-32
XP_011508858 (OMIM: 104200,120070,141200,203780) P (1257) 1747 139.0 1.1e-31
XP_011508857 (OMIM: 104200,120070,141200,203780) P (1609) 1747 139.1 1.2e-31
XP_005246334 (OMIM: 104200,120070,141200,203780) P (1635) 1747 139.2 1.2e-31
NP_000082 (OMIM: 104200,120070,141200,203780) coll (1670) 1747 139.2 1.3e-31
NP_000085 (OMIM: 120120,131705,131750,131850,13200 (2944) 1750 139.7 1.5e-31
XP_011531639 (OMIM: 120120,131705,131750,131850,13 (2944) 1750 139.7 1.5e-31
>>XP_006710428 (OMIM: 120260,600204,603932,614284) PREDI (689 aa)
initn: 5139 init1: 5139 opt: 5139 Z-score: 1984.8 bits: 377.7 E(85289): 8.2e-104
Smith-Waterman score: 5139; 99.9% identity (100.0% similar) in 689 aa overlap (1-689:1-689)
10 20 30 40 50 60
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLP
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_006 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
610 620 630 640 650 660
670 680
pF1KE1 PGFCEPAACLGASAYASARLTEPGSIKGP
:::::::::::::::::::::::::::::
XP_006 PGFCEPAACLGASAYASARLTEPGSIKGP
670 680
>>NP_001843 (OMIM: 120260,600204,603932,614284) collagen (689 aa)
initn: 5139 init1: 5139 opt: 5139 Z-score: 1984.8 bits: 377.7 E(85289): 8.2e-104
Smith-Waterman score: 5139; 99.9% identity (100.0% similar) in 689 aa overlap (1-689:1-689)
10 20 30 40 50 60
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLP
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
610 620 630 640 650 660
670 680
pF1KE1 PGFCEPAACLGASAYASARLTEPGSIKGP
:::::::::::::::::::::::::::::
NP_001 PGFCEPAACLGASAYASARLTEPGSIKGP
670 680
>>XP_016855821 (OMIM: 120260,600204,603932,614284) PREDI (693 aa)
initn: 5230 init1: 3840 opt: 5121 Z-score: 1977.9 bits: 376.4 E(85289): 2e-103
Smith-Waterman score: 5121; 99.3% identity (99.4% similar) in 693 aa overlap (1-689:1-693)
10 20 30 40 50 60
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
70 80 90 100 110 120
130 140 150 160 170
pF1KE1 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFL----CPT
::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
XP_016 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLVRDECPT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 NCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 PGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 KGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGP
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
XP_016 KGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGP
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 QGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGI
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE1 PGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGY
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE1 PGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQ
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE1 LAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGP
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE1 KGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPG
610 620 630 640 650 660
660 670 680
pF1KE1 PVGLPGFCEPAACLGASAYASARLTEPGSIKGP
:::::::::::::::::::::::::::::::::
XP_016 PVGLPGFCEPAACLGASAYASARLTEPGSIKGP
670 680 690
>>XP_016855822 (OMIM: 120260,600204,603932,614284) PREDI (595 aa)
initn: 4455 init1: 4455 opt: 4455 Z-score: 1724.9 bits: 329.4 E(85289): 2.4e-89
Smith-Waterman score: 4455; 99.8% identity (100.0% similar) in 595 aa overlap (95-689:1-595)
70 80 90 100 110 120
pF1KE1 KGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPGPP
::::::::::::::::::::::::::::::
XP_016 MGIPGVKGQPGLPGPPGLPGPGFAGPPGPP
10 20 30
130 140 150 160 170 180
pF1KE1 GPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKG
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE1 PPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKG
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE1 ETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPG
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE1 INGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLPGFSG
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_016 INGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSG
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE1 PPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPG
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE1 VKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAG
340 350 360 370 380 390
490 500 510 520 530 540
pF1KE1 APGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAVSA
400 410 420 430 440 450
550 560 570 580 590 600
pF1KE1 KREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKG
460 470 480 490 500 510
610 620 630 640 650 660
pF1KE1 DPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFC
520 530 540 550 560 570
670 680
pF1KE1 EPAACLGASAYASARLTEPGSIKGP
:::::::::::::::::::::::::
XP_016 EPAACLGASAYASARLTEPGSIKGP
580 590
>>XP_011539017 (OMIM: 120260,600204,603932,614284) PREDI (599 aa)
initn: 3840 init1: 3840 opt: 4437 Z-score: 1718.1 bits: 328.1 E(85289): 5.9e-89
Smith-Waterman score: 4437; 99.2% identity (99.3% similar) in 599 aa overlap (95-689:1-599)
70 80 90 100 110 120
pF1KE1 KGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPGPP
::::::::::::::::::::::::::::::
XP_011 MGIPGVKGQPGLPGPPGLPGPGFAGPPGPP
10 20 30
130 140 150 160 170 180
pF1KE1 GPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFL----CPTNCPP
::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_011 GPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLVRDECPTNCPP
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE1 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE1 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE1 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLP
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_011 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLP
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE1 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE1 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
340 350 360 370 380 390
490 500 510 520 530 540
pF1KE1 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
400 410 420 430 440 450
550 560 570 580 590 600
pF1KE1 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
460 470 480 490 500 510
610 620 630 640 650 660
pF1KE1 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
520 530 540 550 560 570
670 680
pF1KE1 PGFCEPAACLGASAYASARLTEPGSIKGP
:::::::::::::::::::::::::::::
XP_011 PGFCEPAACLGASAYASARLTEPGSIKGP
580 590
>>XP_011539018 (OMIM: 120260,600204,603932,614284) PREDI (599 aa)
initn: 3840 init1: 3840 opt: 4437 Z-score: 1718.1 bits: 328.1 E(85289): 5.9e-89
Smith-Waterman score: 4437; 99.2% identity (99.3% similar) in 599 aa overlap (95-689:1-599)
70 80 90 100 110 120
pF1KE1 KGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPGPP
::::::::::::::::::::::::::::::
XP_011 MGIPGVKGQPGLPGPPGLPGPGFAGPPGPP
10 20 30
130 140 150 160 170 180
pF1KE1 GPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFL----CPTNCPP
::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_011 GPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLVRDECPTNCPP
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE1 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE1 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE1 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLP
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_011 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLP
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE1 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE1 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
340 350 360 370 380 390
490 500 510 520 530 540
pF1KE1 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
400 410 420 430 440 450
550 560 570 580 590 600
pF1KE1 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
460 470 480 490 500 510
610 620 630 640 650 660
pF1KE1 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
520 530 540 550 560 570
670 680
pF1KE1 PGFCEPAACLGASAYASARLTEPGSIKGP
:::::::::::::::::::::::::::::
XP_011 PGFCEPAACLGASAYASARLTEPGSIKGP
580 590
>>XP_011539019 (OMIM: 120260,600204,603932,614284) PREDI (508 aa)
initn: 3764 init1: 3764 opt: 3764 Z-score: 1462.5 bits: 280.6 E(85289): 1e-74
Smith-Waterman score: 3764; 99.8% identity (100.0% similar) in 508 aa overlap (182-689:1-508)
160 170 180 190 200 210
pF1KE1 GPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPG
::::::::::::::::::::::::::::::
XP_011 MKGPPGLQGVKGHAGKRGILGDPGHQGKPG
10 20 30
220 230 240 250 260 270
pF1KE1 PKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRG
40 50 60 70 80 90
280 290 300 310 320 330
pF1KE1 PPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPG
100 110 120 130 140 150
340 350 360 370 380 390
pF1KE1 HQGVAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQG
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQG
160 170 180 190 200 210
400 410 420 430 440 450
pF1KE1 ERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPG
220 230 240 250 260 270
460 470 480 490 500 510
pF1KE1 EKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPG
280 290 300 310 320 330
520 530 540 550 560 570
pF1KE1 RQGVEGRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQGVEGRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQG
340 350 360 370 380 390
580 590 600 610 620 630
pF1KE1 PHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQ
400 410 420 430 440 450
640 650 660 670 680
pF1KE1 AINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARLTEPGSIKGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARLTEPGSIKGP
460 470 480 490 500
>>NP_511040 (OMIM: 120210,614134,614135) collagen alpha- (678 aa)
initn: 4352 init1: 2004 opt: 2740 Z-score: 1071.2 bits: 208.6 E(85289): 6.3e-53
Smith-Waterman score: 2740; 55.4% identity (69.1% similar) in 682 aa overlap (3-683:2-678)
10 20 30 40 50 60
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
: :: :. : :: . . : ::::::.::::::::::::: :::::: :: : :
NP_511 MAWTARDRGALGLLLLGLCLCAAQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPG
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
:::: ::::: : : : :: ::::: : :: .: : ::.::.:: :.:: :. ::
NP_511 PPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
::::: .:::::.: :: :::: :: ::::::: : : .: : :::. :::
NP_511 PGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPRGTIGFHDG-----DPLCPNACPP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
: .: ::: :..:: : .: .:.::.::. : .:: : :: : :::: ::.:: :..
NP_511 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
: ::: : .: : : : : ::..: :::::.:: :::.:. : :: :. :::: :
NP_511 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLP
: ::..:.:: :: :: :: :. : ::. : ::. :::: ::.:: :..: : : :
NP_511 GLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKP
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE1 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
: : :: :. :: ::.::.: .: :..:: ::::.:: :. : : : ::.:::
NP_511 GQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPP
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE1 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
::::.:::.: :. ::.:. : : : ::.:: :. : :::::. : :::: ::
NP_511 GLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPE
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE1 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
:. : :::.: :::::::. :..:. : :: :: :: ::::: .: ....::..::.
NP_511 GSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEM
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE1 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
:.: :: ::.:. : :::::::: ::..: :. : ::.::: : : .: ::::
NP_511 AASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDL
540 550 560 570 580 590
610 620 630 640 650 660
pF1KE1 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
::::. : ::: :.:: :.:: :: . . ::.::.:: ::. : : :: ::: ::
NP_511 GEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGL
600 610 620 630 640 650
670 680
pF1KE1 PGFCEPAAC-LGASAYASARLTEPGSIKGP
:::::::.: . :. : . .:
NP_511 PGFCEPASCTMQAGQRAFNKGPDP
660 670
>>NP_001842 (OMIM: 120210,614134,614135) collagen alpha- (921 aa)
initn: 4352 init1: 2004 opt: 2723 Z-score: 1063.3 bits: 207.6 E(85289): 1.7e-52
Smith-Waterman score: 2723; 56.1% identity (69.8% similar) in 659 aa overlap (26-683:268-921)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGP
::::::.::::::::::::: :::::: ::
NP_001 MLIHCDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGP
240 250 260 270 280 290
60 70 80 90 100 110
pF1KE1 PGKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGP
: ::::: ::::: : : : :: ::::: : :: .: : ::.::.:: :.::
NP_001 KGPPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGR
300 310 320 330 340 350
120 130 140 150 160 170
pF1KE1 GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCP
:. ::::::: .:::::.: :: :::: :: ::::::: : : .: : :::
NP_001 GIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPRGTIGFHDG-----DPLCP
360 370 380 390 400 410
180 190 200 210 220 230
pF1KE1 TNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRG
. :::: .: ::: :..:: : .: .:.::.::. : .:: : :: : :::: ::.::
NP_001 NACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRG
420 430 440 450 460 470
240 250 260 270 280 290
pF1KE1 YPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITG
:..: ::: : .: : : : : ::..: :::::.:: :::.:. : :: :. :
NP_001 ITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG
480 490 500 510 520 530
300 310 320 330 340 350
pF1KE1 PKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPG
::: :: ::..:.:: :: :: :: :. : ::. : ::. :::: ::.:: :..: :
NP_001 PKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTG
540 550 560 570 580 590
360 370 380 390 400 410
pF1KE1 PQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPG
: :: : :: :. :: ::.::.: .: :..:: ::::.:: :. : : : ::
NP_001 APGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPG
600 610 620 630 640 650
420 430 440 450 460 470
pF1KE1 IPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPG
.::: ::::.:::.: :. ::.:. : : : ::.:: :. : :::::. : ::::
NP_001 LPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPG
660 670 680 690 700 710
480 490 500 510 520 530
pF1KE1 YPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQE
:: :. : :::.: :::::::. :..:. : :: :: :: ::::: .: ....::
NP_001 LRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQE
720 730 740 750 760 770
540 550 560 570 580 590
pF1KE1 QLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTG
..::.:.: :: ::.:. : :::::::: ::..: :. : ::.::: : : .: :
NP_001 HFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRG
780 790 800 810 820 830
600 610 620 630 640 650
pF1KE1 PKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLP
::: ::::. : ::: :.:: :.:: :: . . ::.::.:: ::. : : :: :
NP_001 PKGDLGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPP
840 850 860 870 880 890
660 670 680
pF1KE1 GPVGLPGFCEPAAC-LGASAYASARLTEPGSIKGP
:: :::::::::.: . :. : . .:
NP_001 GPPGLPGFCEPASCTMQAGQRAFNKGPDP
900 910 920
>>XP_011533732 (OMIM: 120210,614134,614135) PREDICTED: c (688 aa)
initn: 4368 init1: 1392 opt: 2482 Z-score: 972.9 bits: 190.4 E(85289): 1.9e-47
Smith-Waterman score: 2718; 54.8% identity (68.2% similar) in 692 aa overlap (3-683:2-688)
10 20 30 40 50 60
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
: :: :. : :: . . : ::::::.::::::::::::: :::::: :: : :
XP_011 MAWTARDRGALGLLLLGLCLCAAQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPG
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
:::: ::::: : : : :: ::::: : :: .: : ::.::.:: :.:: :. ::
XP_011 PPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
::::: .:::::.: :: :::: :: ::::::: : : .: : :::. :::
XP_011 PGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPRGTIGFHDG-----DPLCPNACPP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
: .: ::: :..:: : .: .:.::.::. : .:: : :: : :::: ::.:: :..
XP_011 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
: ::: : .: : : : : ::..: :::::.:: :::.:. : :: :. :::: :
XP_011 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT
240 250 260 270 280 290
310 320 330 340 350
pF1KE1 GPPGINGKDGTPGTPG----------MKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGD
: ::..:.:: :: :: ::: :. : ::. : ::. :::: ::.:: :.
XP_011 GLPGVDGRDGIPGMPGTKELSKIALLMKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGE
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE1 QGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGE
.: : : :: : :: :. :: ::.::.: .: :..:: ::::.:: :. : :
XP_011 KGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE1 QGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGV
: ::.::: ::::.:::.: :. ::.:. : : : ::.:: :. : :::::. :
XP_011 PGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGN
420 430 440 450 460 470
480 490 500 510 520 530
pF1KE1 RGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVAL
:::: :: :. : :::.: :::::::. :..:. : :: :: :: ::::: .: .
XP_011 PGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCM
480 490 500 510 520 530
540 550 560 570 580 590
pF1KE1 KMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQ
...::..::.:.: :: ::.:. : :::::::: ::..: :. : ::.::: : :
XP_011 RVIQEHFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGA
540 550 560 570 580 590
600 610 620 630 640 650
pF1KE1 IGNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAG
.: :::: ::::. : ::: :.:: :.:: :: . . ::.::.:: ::. : :
XP_011 LGLRGPKGDLGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPG
600 610 620 630 640 650
660 670 680
pF1KE1 RPGLPGPVGLPGFCEPAAC-LGASAYASARLTEPGSIKGP
:: ::: :::::::::.: . :. : . .:
XP_011 VPGPPGPPGLPGFCEPASCTMQAGQRAFNKGPDP
660 670 680
689 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:21:38 2016 done: Sun Nov 6 19:21:40 2016
Total Scan time: 11.480 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]