FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1175, 664 aa
  1>>>pF1KE1175 664 - 664 aa - 664 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.7105+/-0.00107; mu= 0.1008+/- 0.063
 mean_var=270.3423+/-65.246, 0's: 0 Z-trim(110.2): 25  B-trim: 608 in 1/52
 Lambda= 0.078004
 statistics sampled from 11392 (11410) to 11392 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.688), E-opt: 0.2 (0.35), width:  16
 Scan time:  3.460

The best scores are:                                      opt bits E(32554)
CCDS5795.1 ZNF800 gene_id:168850|Hs108|chr7        ( 664) 4436 513.2 4.7e-145


>>CCDS5795.1 ZNF800 gene_id:168850|Hs108|chr7             (664 aa)
 initn: 4436 init1: 4436 opt: 4436  Z-score: 2717.7  bits: 513.2 E(32554): 4.7e-145
Smith-Waterman score: 4436; 100.0% identity (100.0% similar) in 664 aa overlap (1-664:1-664)

               10        20        30        40        50        60
pF1KE1 MPLRDKYCQTDHHHHGCCEPVYILEPGDPPLLQQPLQTSKSGIQQIIECFRSGTKQLKHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MPLRDKYCQTDHHHHGCCEPVYILEPGDPPLLQQPLQTSKSGIQQIIECFRSGTKQLKHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLKDVDTIFECKLCRSLFRGLPNLITHKKFYCPPSLQMDDNLPDVNDKQSQAINDLLEAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 LLKDVDTIFECKLCRSLFRGLPNLITHKKFYCPPSLQMDDNLPDVNDKQSQAINDLLEAI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 YPSVDKREYIIKLEPIETNQNAVFQYISRTDNPIEVTESSSTPEQTEVQIQETSTEQSKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 YPSVDKREYIIKLEPIETNQNAVFQYISRTDNPIEVTESSSTPEQTEVQIQETSTEQSKT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 VPVTDTEVETVEPPPVEIVTDEVAPTSDEQPQESQADLETSDNSDFGHQLICCLCRKEFN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 VPVTDTEVETVEPPPVEIVTDEVAPTSDEQPQESQADLETSDNSDFGHQLICCLCRKEFN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SRRGVRRHIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSCPVCCKSFATKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 SRRGVRRHIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSCPVCCKSFATKA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 NVRRHFDEVHRGLRRDSITPDIATKPGQPLFLDSISPKKSFKTRKQKSSSKAEYNLTACK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 NVRRHFDEVHRGLRRDSITPDIATKPGQPLFLDSISPKKSFKTRKQKSSSKAEYNLTACK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 CLLCKRKYSSQIMLKRHMQIVHKITLSGTNSKREKGPNNTANSSEIKVKVEPADSVESSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 CLLCKRKYSSQIMLKRHMQIVHKITLSGTNSKREKGPNNTANSSEIKVKVEPADSVESSP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 PSITHSPQNELKGTNHSNEKKNTPAAQKNKVKQDSESPKSTSPSAAGGQQKTRKPKLSAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 PSITHSPQNELKGTNHSNEKKNTPAAQKNKVKQDSESPKSTSPSAAGGQQKTRKPKLSAG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE1 FDFKQLYCKLCKRQFTSKQNLTKHIELHTDGNNIYVKFYKCPLCTYETRRKRDVIRHITV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 FDFKQLYCKLCKRQFTSKQNLTKHIELHTDGNNIYVKFYKCPLCTYETRRKRDVIRHITV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE1 VHKKSSRYLGKITASLEIRAIKKPIDFVLNKVAKRGPSRDEAKHSDSKHDGTSNSPSKKY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 VHKKSSRYLGKITASLEIRAIKKPIDFVLNKVAKRGPSRDEAKHSDSKHDGTSNSPSKKY
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE1 EVADVGIEVKVTKNFSLHRCNKCGKAFAKKTYLEHHKKTHKANASNSPEGNKTKGRSTRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 EVADVGIEVKVTKNFSLHRCNKCGKAFAKKTYLEHHKKTHKANASNSPEGNKTKGRSTRS
              610       620       630       640       650       660

           
pF1KE1 KALV
       ::::
CCDS57 KALV
           




664 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 16:18:09 2016 done: Sun Nov  6 16:18:09 2016
 Total Scan time:  3.460 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]