Result of FASTA (omim) for
pFN21AE1142
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1142, 420 aa
1>>>pF1KE1142 420 - 420 aa - 420 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4183+/-0.000342; mu= 13.8851+/- 0.022
mean_var=129.7020+/-26.894, 0's: 0 Z-trim(118.3): 65 B-trim: 1669 in 1/54
Lambda= 0.112616
statistics sampled from 30934 (31019) to 30934 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.364), width: 16
Scan time: 9.870
The best scores are: opt bits E(85289)
NP_689506 (OMIM: 608790) transcriptional adapter 2 ( 420) 2832 471.3 2e-132
XP_011511897 (OMIM: 608790) PREDICTED: transcripti ( 328) 2154 361.0 2.5e-99
NP_001159577 (OMIM: 602276) transcriptional adapte ( 443) 512 94.4 6.2e-19
NP_001479 (OMIM: 602276) transcriptional adapter 2 ( 443) 512 94.4 6.2e-19
NP_597683 (OMIM: 602276) transcriptional adapter 2 ( 305) 434 81.6 3.1e-15
NP_001278847 (OMIM: 602276) transcriptional adapte ( 305) 434 81.6 3.1e-15
XP_011523456 (OMIM: 602276) PREDICTED: transcripti ( 380) 434 81.6 3.6e-15
XP_011523455 (OMIM: 602276) PREDICTED: transcripti ( 380) 434 81.6 3.6e-15
XP_016880470 (OMIM: 602276) PREDICTED: transcripti ( 423) 434 81.7 3.9e-15
XP_016880472 (OMIM: 602276) PREDICTED: transcripti ( 342) 330 64.7 4.1e-10
XP_006722107 (OMIM: 602276) PREDICTED: transcripti ( 342) 330 64.7 4.1e-10
XP_016880474 (OMIM: 602276) PREDICTED: transcripti ( 342) 330 64.7 4.1e-10
XP_016880473 (OMIM: 602276) PREDICTED: transcripti ( 342) 330 64.7 4.1e-10
XP_011523457 (OMIM: 602276) PREDICTED: transcripti ( 342) 330 64.7 4.1e-10
>>NP_689506 (OMIM: 608790) transcriptional adapter 2-bet (420 aa)
initn: 2832 init1: 2832 opt: 2832 Z-score: 2498.3 bits: 471.3 E(85289): 2e-132
Smith-Waterman score: 2832; 100.0% identity (100.0% similar) in 420 aa overlap (1-420:1-420)
10 20 30 40 50 60
pF1KE1 MAELGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MAELGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 AETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 AETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 EKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 EKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGIT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 KMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 SLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWISRDAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 SLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWISRDAS
370 380 390 400 410 420
>>XP_011511897 (OMIM: 608790) PREDICTED: transcriptional (328 aa)
initn: 2154 init1: 2154 opt: 2154 Z-score: 1904.4 bits: 361.0 E(85289): 2.5e-99
Smith-Waterman score: 2154; 100.0% identity (100.0% similar) in 328 aa overlap (93-420:1-328)
70 80 90 100 110 120
pF1KE1 GPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKA
::::::::::::::::::::::::::::::
XP_011 MAAHVGASRTPQEVMEHYVSMYIHGNLGKA
10 20 30
130 140 150 160 170 180
pF1KE1 CIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAE
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE1 TLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEK
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE1 ALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKM
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE1 EESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCSSL
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE1 NLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWISRDAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWISRDAS
280 290 300 310 320
>>NP_001159577 (OMIM: 602276) transcriptional adapter 2- (443 aa)
initn: 571 init1: 189 opt: 512 Z-score: 460.9 bits: 94.4 E(85289): 6.2e-19
Smith-Waterman score: 557; 27.6% identity (56.6% similar) in 445 aa overlap (6-417:14-442)
10 20 30 40 50
pF1KE1 MAELGKKYCVYCLAEVSPLRFRCTEC--QDIELCPECFSAGAEIGHHRRYHG
: : : . . ..:.:: . :: .::. : : .:. :
NP_001 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 YQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHY
:... . : . : .::..::. ::.:. . :::::.:.: .. ..: .: .::
NP_001 YEIMTSD-FPVLDP----SWTAQEEMALLEAVMDCGFGNWQDVANQM-CTKTKEECEKHY
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 VSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLR
.. .:.. : . . . . . .: .. :. . : : .: :. ... :::: :
NP_001 MKHFINNPLFASTLLN-LKQAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPAR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 DDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVP
:. :.:. :: . .. ::.:. :: : ::.: .::::::::.: ::..:.
NP_001 ADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 AFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRE
. .: . ..:. :: ..: .: . .... : : ..:. : :: .:..
NP_001 ------NLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKR
240 250 260 270 280
300 310 320 330
pF1KE1 LQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSK--------------RGKED---
::.:: :::.. . :. .. ::... .... . : . :
NP_001 LQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDS
290 300 310 320 330 340
340 350 360 370 380
pF1KE1 ------------GKDSEFA-AIENLPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDH
:. : . .::: : :...:: ::. . : :. :. :. .. ..
NP_001 GLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALL-NE
350 360 370 380 390 400
390 400 410 420
pF1KE1 LQKRQGIP-SKSRLPSYLDKVLKKRILNFLTESGWISRDAS
.:. :. ...: .: ..: .:: . :.:..
NP_001 CNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKG
410 420 430 440
>>NP_001479 (OMIM: 602276) transcriptional adapter 2-alp (443 aa)
initn: 571 init1: 189 opt: 512 Z-score: 460.9 bits: 94.4 E(85289): 6.2e-19
Smith-Waterman score: 557; 27.6% identity (56.6% similar) in 445 aa overlap (6-417:14-442)
10 20 30 40 50
pF1KE1 MAELGKKYCVYCLAEVSPLRFRCTEC--QDIELCPECFSAGAEIGHHRRYHG
: : : . . ..:.:: . :: .::. : : .:. :
NP_001 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 YQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHY
:... . : . : .::..::. ::.:. . :::::.:.: .. ..: .: .::
NP_001 YEIMTSD-FPVLDP----SWTAQEEMALLEAVMDCGFGNWQDVANQM-CTKTKEECEKHY
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 VSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLR
.. .:.. : . . . . . .: .. :. . : : .: :. ... :::: :
NP_001 MKHFINNPLFASTLLN-LKQAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPAR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 DDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVP
:. :.:. :: . .. ::.:. :: : ::.: .::::::::.: ::..:.
NP_001 ADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 AFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRE
. .: . ..:. :: ..: .: . .... : : ..:. : :: .:..
NP_001 ------NLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKR
240 250 260 270 280
300 310 320 330
pF1KE1 LQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSK--------------RGKED---
::.:: :::.. . :. .. ::... .... . : . :
NP_001 LQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDS
290 300 310 320 330 340
340 350 360 370 380
pF1KE1 ------------GKDSEFA-AIENLPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDH
:. : . .::: : :...:: ::. . : :. :. :. .. ..
NP_001 GLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALL-NE
350 360 370 380 390 400
390 400 410 420
pF1KE1 LQKRQGIP-SKSRLPSYLDKVLKKRILNFLTESGWISRDAS
.:. :. ...: .: ..: .:: . :.:..
NP_001 CNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKG
410 420 430 440
>>NP_597683 (OMIM: 602276) transcriptional adapter 2-alp (305 aa)
initn: 399 init1: 187 opt: 434 Z-score: 394.5 bits: 81.6 E(85289): 3.1e-15
Smith-Waterman score: 434; 30.3% identity (59.9% similar) in 274 aa overlap (6-277:14-272)
10 20 30 40 50
pF1KE1 MAELGKKYCVYCLAEVSPLRFRCTEC--QDIELCPECFSAGAEIGHHRRYHG
: : : . . ..:.:: . :: .::. : : .:. :
NP_597 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 YQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHY
:... . : . : .::..::. ::.:. . :::::.:.: .. ..: .: .::
NP_597 YEIMTSD-FPVLDP----SWTAQEEMALLEAVMDCGFGNWQDVANQM-CTKTKEECEKHY
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 VSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLR
.. .:.. : . . . . . .: .. :. . : : .: :. ... :::: :
NP_597 MKHFINNPLFASTLLN-LKQAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPAR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 DDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVP
:. :.:. :: . .. ::.:. :: : ::.: .::::::::.: ::..:.
NP_597 ADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 AFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRE
. .: . ..:. :: ..: .: . .... : : ..:.
NP_597 ------NLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHACRWFLSLEQYL
240 250 260 270 280
300 310 320 330 340 350
pF1KE1 LQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFEL
NP_597 CVYIYINRRDNGVFYVKFYK
290 300
>>NP_001278847 (OMIM: 602276) transcriptional adapter 2- (305 aa)
initn: 399 init1: 187 opt: 434 Z-score: 394.5 bits: 81.6 E(85289): 3.1e-15
Smith-Waterman score: 434; 30.3% identity (59.9% similar) in 274 aa overlap (6-277:14-272)
10 20 30 40 50
pF1KE1 MAELGKKYCVYCLAEVSPLRFRCTEC--QDIELCPECFSAGAEIGHHRRYHG
: : : . . ..:.:: . :: .::. : : .:. :
NP_001 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 YQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHY
:... . : . : .::..::. ::.:. . :::::.:.: .. ..: .: .::
NP_001 YEIMTSD-FPVLDP----SWTAQEEMALLEAVMDCGFGNWQDVANQM-CTKTKEECEKHY
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 VSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLR
.. .:.. : . . . . . .: .. :. . : : .: :. ... :::: :
NP_001 MKHFINNPLFASTLLN-LKQAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPAR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 DDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVP
:. :.:. :: . .. ::.:. :: : ::.: .::::::::.: ::..:.
NP_001 ADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 AFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRE
. .: . ..:. :: ..: .: . .... : : ..:.
NP_001 ------NLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHACRWFLSLEQYL
240 250 260 270 280
300 310 320 330 340 350
pF1KE1 LQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFEL
NP_001 CVYIYINRRDNGVFYVKFYK
290 300
>>XP_011523456 (OMIM: 602276) PREDICTED: transcriptional (380 aa)
initn: 512 init1: 189 opt: 434 Z-score: 393.3 bits: 81.6 E(85289): 3.6e-15
Smith-Waterman score: 479; 27.8% identity (57.7% similar) in 385 aa overlap (64-417:6-379)
40 50 60 70 80 90
pF1KE1 ECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDM
: . .::..::. ::.:. . :::::.:.
XP_011 MTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDV
10 20 30
100 110 120 130 140 150
pF1KE1 AAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPP
: .. ..: .: .::.. .:.. : . . . . . .: .. :. . : :
XP_011 ANQM-CTKTKEECEKHYMKHFINNPLFASTLLN-LKQAEEAKTADTAIPFHSTDDPPRPT
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE1 LDISVAEQQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKL
.: :. ... :::: : :. :.:. :: . .. ::.:. :: : ::.: .:
XP_011 FD-SLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE1 KERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDD
:::::::.: ::..:. . .: . ..:. :: ..: .: . .... : :
XP_011 KERQRRKKIIRDHGLI-------NLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDK
160 170 180 190 200
280 290 300 310 320
pF1KE1 LFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSK-----
..:. : :: .:..::.:: :::.. . :. .. ::... .... .
XP_011 FIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQ
210 220 230 240 250 260
330 340 350 360
pF1KE1 ---------RGKED---------------GKDSEFA-AIENLPGFELLSDREKVLCSSLN
: . : :. : . .::: : :...:: ::. .
XP_011 DSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVR
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE1 LSPARYVTVKTIIIKDHLQKRQGIP-SKSRLPSYLDKVLKKRILNFLTESGWISRDAS
: :. :. :. .. .. .:. :. ...: .: ..: .:: . :.:..
XP_011 LVPGAYLEYKSALL-NECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKG
330 340 350 360 370 380
>>XP_011523455 (OMIM: 602276) PREDICTED: transcriptional (380 aa)
initn: 512 init1: 189 opt: 434 Z-score: 393.3 bits: 81.6 E(85289): 3.6e-15
Smith-Waterman score: 479; 27.8% identity (57.7% similar) in 385 aa overlap (64-417:6-379)
40 50 60 70 80 90
pF1KE1 ECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDM
: . .::..::. ::.:. . :::::.:.
XP_011 MTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDV
10 20 30
100 110 120 130 140 150
pF1KE1 AAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPP
: .. ..: .: .::.. .:.. : . . . . . .: .. :. . : :
XP_011 ANQM-CTKTKEECEKHYMKHFINNPLFASTLLN-LKQAEEAKTADTAIPFHSTDDPPRPT
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE1 LDISVAEQQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKL
.: :. ... :::: : :. :.:. :: . .. ::.:. :: : ::.: .:
XP_011 FD-SLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE1 KERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDD
:::::::.: ::..:. . .: . ..:. :: ..: .: . .... : :
XP_011 KERQRRKKIIRDHGLI-------NLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDK
160 170 180 190 200
280 290 300 310 320
pF1KE1 LFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSK-----
..:. : :: .:..::.:: :::.. . :. .. ::... .... .
XP_011 FIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQ
210 220 230 240 250 260
330 340 350 360
pF1KE1 ---------RGKED---------------GKDSEFA-AIENLPGFELLSDREKVLCSSLN
: . : :. : . .::: : :...:: ::. .
XP_011 DSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVR
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE1 LSPARYVTVKTIIIKDHLQKRQGIP-SKSRLPSYLDKVLKKRILNFLTESGWISRDAS
: :. :. :. .. .. .:. :. ...: .: ..: .:: . :.:..
XP_011 LVPGAYLEYKSALL-NECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKG
330 340 350 360 370 380
>>XP_016880470 (OMIM: 602276) PREDICTED: transcriptional (423 aa)
initn: 512 init1: 189 opt: 434 Z-score: 392.7 bits: 81.7 E(85289): 3.9e-15
Smith-Waterman score: 482; 27.2% identity (55.4% similar) in 426 aa overlap (23-417:17-422)
10 20 30 40 50 60
pF1KE1 MAELGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFT
: :.. . : . :: : . : : :
XP_016 MDRLGSFSNDPSDKPPCRGCSSYLMEP--YIKCAECGPPPFFLCLQTSD---FP
10 20 30 40
70 80 90 100 110 120
pF1KE1 LWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLG
. : .::..::. ::.:. . :::::.:.: .. ..: .: .::.. .:.. :
XP_016 VLDP----SWTAQEEMALLEAVMDCGFGNWQDVANQM-CTKTKEECEKHYMKHFINNPLF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 KACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQD
. . . . . .: .. :. . : : .: :. ... :::: : :. :.:.
XP_016 ASTLLN-LKQAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPARADFIEEFDNY
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 AETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEK
:: . .. ::.:. :: : ::.: .::::::::.: ::..:. . .:
XP_016 AEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-------NLRK
170 180 190 200 210
250 260 270 280 290 300
pF1KE1 EKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGIT
. ..:. :: ..: .: . .... : : ..:. : :: .:..::.:: :::
XP_016 FQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGIT
220 230 240 250 260 270
310 320 330
pF1KE1 KMEESAEYEAARHKREKRKENKNLAGSK--------------RGKED-------------
.. . :. .. ::... .... . : . :
XP_016 NFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMAS
280 290 300 310 320 330
340 350 360 370 380
pF1KE1 --GKDSEFA-AIENLPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIP-S
:. : . .::: : :...:: ::. . : :. :. :. .... .:. :. .
XP_016 NSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNE-CNKQGGLRLA
340 350 360 370 380 390
390 400 410 420
pF1KE1 KSRLPSYLDKVLKKRILNFLTESGWISRDAS
..: .: ..: .:: . :.:..
XP_016 QARALIKIDVNKTRKIYDFLIREGYITKG
400 410 420
>>XP_016880472 (OMIM: 602276) PREDICTED: transcriptional (342 aa)
initn: 414 init1: 189 opt: 330 Z-score: 302.6 bits: 64.7 E(85289): 4.1e-10
Smith-Waterman score: 375; 26.4% identity (55.9% similar) in 349 aa overlap (100-417:3-341)
70 80 90 100 110 120
pF1KE1 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDTIP
..: .: .::.. .:.. : . . . .
XP_016 MCTKTKEECEKHYMKHFINNPLFASTLLN-LK
10 20 30
130 140 150 160 170 180
pF1KE1 NRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAETLISGLS
. .: .. :. . : : .: :. ... :::: : :. :.:. :: . ..
XP_016 QAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE1 VNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKIT
::.:. :: : ::.: .::::::::.: ::..:. . .: . ..:.
XP_016 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-------NLRKFQLMERRYP
100 110 120 130 140
250 260 270 280 290 300
pF1KE1 KEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYE
:: ..: .: . .... : : ..:. : :: .:..::.:: :::.. . :.
XP_016 KEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYD
150 160 170 180 190 200
310 320 330 340
pF1KE1 AARHKREKRKENKNLAGSK--------------RGKED---------------GKDSEFA
.. ::... .... . : . : :. :
XP_016 HLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPP
210 220 230 240 250 260
350 360 370 380 390
pF1KE1 -AIENLPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIP-SKSRLPSYLD
. .::: : :...:: ::. . : :. :. :. .... .:. :. ...: .:
XP_016 LNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNE-CNKQGGLRLAQARALIKID
270 280 290 300 310 320
400 410 420
pF1KE1 KVLKKRILNFLTESGWISRDAS
..: .:: . :.:..
XP_016 VNKTRKIYDFLIREGYITKG
330 340
420 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:29:20 2016 done: Sun Nov 6 10:29:22 2016
Total Scan time: 9.870 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]