FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1113, 154 aa
  1>>>pF1KE1113 154 - 154 aa - 154 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0251+/-0.000603; mu= 10.8532+/- 0.037
 mean_var=105.9310+/-22.308, 0's: 0 Z-trim(115.6): 1  B-trim: 758 in 1/49
 Lambda= 0.124613
 statistics sampled from 16125 (16126) to 16125 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.837), E-opt: 0.2 (0.495), width:  16
 Scan time:  1.600

The best scores are:                                      opt bits E(32554)
CCDS5716.1 ZNHIT1 gene_id:10467|Hs108|chr7         ( 154) 1092 205.3 1.2e-53


>>CCDS5716.1 ZNHIT1 gene_id:10467|Hs108|chr7              (154 aa)
 initn: 1092 init1: 1092 opt: 1092  Z-score: 1076.4  bits: 205.3 E(32554): 1.2e-53
Smith-Waterman score: 1092; 100.0% identity (100.0% similar) in 154 aa overlap (1-154:1-154)

               10        20        30        40        50        60
pF1KE1 MVEKKTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MVEKKTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 DADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 DADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVC
               70        80        90       100       110       120

              130       140       150    
pF1KE1 GFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV
       ::::::::::::::::::::::::::::::::::
CCDS57 GFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV
              130       140       150    




154 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 01:02:32 2016 done: Mon Nov  7 01:02:32 2016
 Total Scan time:  1.600 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]