Result of FASTA (ccds) for
pFN21AE1110
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1110, 116 aa
1>>>pF1KE1110 116 - 116 aa - 116 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5457+/-0.000635; mu= 3.1018+/- 0.039
mean_var=178.3052+/-35.492, 0's: 0 Z-trim(118.8): 23 B-trim: 0 in 0/52
Lambda= 0.096049
statistics sampled from 19825 (19848) to 19825 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.883), E-opt: 0.2 (0.61), width: 16
Scan time: 1.770
The best scores are: opt bits E(32554)
CCDS48114.1 GAGE2A gene_id:729447|Hs108|chrX ( 116) 834 125.4 7.6e-30
CCDS48110.1 GAGE13 gene_id:645051|Hs108|chrX ( 117) 827 124.5 1.5e-29
CCDS43950.1 GAGE1 gene_id:2543|Hs108|chrX ( 117) 815 122.8 4.8e-29
CCDS43947.1 GAGE12G gene_id:645073|Hs108|chrX ( 117) 814 122.7 5.3e-29
CCDS43946.1 GAGE12F gene_id:100008586|Hs108|chrX ( 117) 814 122.7 5.3e-29
CCDS43939.1 GAGE12J gene_id:729396|Hs108|chrX ( 117) 813 122.5 5.8e-29
CCDS43945.1 GAGE12E gene_id:729431|Hs108|chrX ( 117) 803 121.1 1.5e-28
CCDS48113.1 GAGE12D gene_id:100132399|Hs108|chrX ( 117) 803 121.1 1.5e-28
CCDS43943.1 GAGE12C gene_id:729422|Hs108|chrX ( 117) 803 121.1 1.5e-28
CCDS43948.1 GAGE12H gene_id:729442|Hs108|chrX ( 117) 798 120.4 2.4e-28
CCDS78483.1 GAGE10 gene_id:102724473|Hs108|chrX ( 116) 782 118.2 1.1e-27
>>CCDS48114.1 GAGE2A gene_id:729447|Hs108|chrX (116 aa)
initn: 834 init1: 834 opt: 834 Z-score: 649.2 bits: 125.4 E(32554): 7.6e-30
Smith-Waterman score: 834; 98.3% identity (99.1% similar) in 116 aa overlap (1-116:1-116)
10 20 30 40 50 60
pF1KE1 MSWRGRSTYRPRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
CCDS48 MSWRGRSTYRPRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQD
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 EGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS48 EGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
>>CCDS48110.1 GAGE13 gene_id:645051|Hs108|chrX (117 aa)
initn: 778 init1: 778 opt: 827 Z-score: 644.0 bits: 124.5 E(32554): 1.5e-29
Smith-Waterman score: 827; 98.3% identity (98.3% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MSWRGRSTYYWPRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
>>CCDS43950.1 GAGE1 gene_id:2543|Hs108|chrX (117 aa)
initn: 766 init1: 766 opt: 815 Z-score: 635.0 bits: 122.8 E(32554): 4.8e-29
Smith-Waterman score: 815; 96.6% identity (97.4% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS43 MSWRGRSTYYWPRPRRYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
CCDS43 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEGQSQC
70 80 90 100 110
>>CCDS43947.1 GAGE12G gene_id:645073|Hs108|chrX (117 aa)
initn: 765 init1: 765 opt: 814 Z-score: 634.2 bits: 122.7 E(32554): 5.3e-29
Smith-Waterman score: 814; 96.6% identity (97.4% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS43 MSWRGRSTYYWPRPRRYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS43 DEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
>>CCDS43946.1 GAGE12F gene_id:100008586|Hs108|chrX (117 aa)
initn: 765 init1: 765 opt: 814 Z-score: 634.2 bits: 122.7 E(32554): 5.3e-29
Smith-Waterman score: 814; 96.6% identity (97.4% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS43 MSWRGRSTYYWPRPRRYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS43 DEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
>>CCDS43939.1 GAGE12J gene_id:729396|Hs108|chrX (117 aa)
initn: 764 init1: 764 opt: 813 Z-score: 633.5 bits: 122.5 E(32554): 5.8e-29
Smith-Waterman score: 813; 96.6% identity (97.4% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::: ::.:::::::::::::::::::::::::::::::::::::::::
CCDS43 MSWRGRSTYYWPRPRPYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
>>CCDS43945.1 GAGE12E gene_id:729431|Hs108|chrX (117 aa)
initn: 754 init1: 754 opt: 803 Z-score: 626.0 bits: 121.1 E(32554): 1.5e-28
Smith-Waterman score: 803; 95.7% identity (96.6% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::::::.:::::::::::::::::::::::::::::: ::::::::::
CCDS43 MSWRGRSTYYWPRPRRYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQCQDPAAAQEGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS43 DEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
>>CCDS48113.1 GAGE12D gene_id:100132399|Hs108|chrX (117 aa)
initn: 754 init1: 754 opt: 803 Z-score: 626.0 bits: 121.1 E(32554): 1.5e-28
Smith-Waterman score: 803; 95.7% identity (96.6% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::::::.:::::::::::::::::::::::::::::: ::::::::::
CCDS48 MSWRGRSTYYWPRPRRYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQCQDPAAAQEGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS48 DEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
>>CCDS43943.1 GAGE12C gene_id:729422|Hs108|chrX (117 aa)
initn: 754 init1: 754 opt: 803 Z-score: 626.0 bits: 121.1 E(32554): 1.5e-28
Smith-Waterman score: 803; 95.7% identity (96.6% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::::::.:::::::::::::::::::::::::::::: ::::::::::
CCDS43 MSWRGRSTYYWPRPRRYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQCQDPAAAQEGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS43 DEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
>>CCDS43948.1 GAGE12H gene_id:729442|Hs108|chrX (117 aa)
initn: 749 init1: 749 opt: 798 Z-score: 622.2 bits: 120.4 E(32554): 2.4e-28
Smith-Waterman score: 798; 94.9% identity (96.6% similar) in 117 aa overlap (1-116:1-117)
10 20 30 40 50
pF1KE1 MSWRGRSTYR-PRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGE
::::::::: :::::::.:::::::::::::::::::::::::::::: :::::::.::
CCDS43 MSWRGRSTYYWPRPRRYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQCQDPAAAQKGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
:::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS43 DEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC
70 80 90 100 110
116 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:50:59 2016 done: Sun Nov 6 10:51:00 2016
Total Scan time: 1.770 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]