Result of FASTA (omim) for
pFN21AE1089
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1089, 456 aa
1>>>pF1KE1089 456 - 456 aa - 456 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6958+/-0.000407; mu= 15.7955+/- 0.026
mean_var=79.0435+/-15.673, 0's: 0 Z-trim(111.8): 161 B-trim: 47 in 1/54
Lambda= 0.144258
statistics sampled from 20340 (20509) to 20340 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.601), E-opt: 0.2 (0.24), width: 16
Scan time: 5.570
The best scores are: opt bits E(85289)
NP_001121116 (OMIM: 137160,611136,615744) gamma-am ( 456) 3039 642.5 6.9e-184
NP_001121117 (OMIM: 137160,611136,615744) gamma-am ( 456) 3039 642.5 6.9e-184
NP_000797 (OMIM: 137160,611136,615744) gamma-amino ( 456) 3039 642.5 6.9e-184
NP_001121120 (OMIM: 137160,611136,615744) gamma-am ( 456) 3039 642.5 6.9e-184
NP_001121115 (OMIM: 137160,611136,615744) gamma-am ( 456) 3039 642.5 6.9e-184
XP_016863471 (OMIM: 103780,137140) PREDICTED: gamm ( 451) 2255 479.3 9e-135
NP_000798 (OMIM: 103780,137140) gamma-aminobutyric ( 451) 2255 479.3 9e-135
XP_016863472 (OMIM: 103780,137140) PREDICTED: gamm ( 451) 2255 479.3 9e-135
NP_001107647 (OMIM: 103780,137140) gamma-aminobuty ( 451) 2255 479.3 9e-135
XP_005268315 (OMIM: 137142) PREDICTED: gamma-amino ( 462) 2113 449.8 7.2e-126
XP_006720522 (OMIM: 137142) PREDICTED: gamma-amino ( 462) 2113 449.8 7.2e-126
NP_000801 (OMIM: 137142) gamma-aminobutyric acid r ( 462) 2113 449.8 7.2e-126
NP_001158509 (OMIM: 137142) gamma-aminobutyric aci ( 462) 2113 449.8 7.2e-126
XP_005248137 (OMIM: 103780,137140) PREDICTED: gamm ( 396) 1978 421.6 1.8e-117
NP_000799 (OMIM: 305660) gamma-aminobutyric acid r ( 492) 1916 408.8 1.7e-113
XP_011511977 (OMIM: 103780,137140) PREDICTED: gamm ( 511) 1892 403.8 5.5e-112
NP_001317619 (OMIM: 103780,137140) gamma-aminobuty ( 511) 1892 403.8 5.5e-112
NP_000802 (OMIM: 137143) gamma-aminobutyric acid r ( 453) 1660 355.5 1.7e-97
NP_001273756 (OMIM: 103780,137140) gamma-aminobuty ( 456) 1615 346.1 1.1e-94
NP_000800 (OMIM: 137141) gamma-aminobutyric acid r ( 554) 1611 345.3 2.4e-94
NP_001191195 (OMIM: 137141) gamma-aminobutyric aci ( 535) 1608 344.7 3.6e-94
XP_006724874 (OMIM: 305660) PREDICTED: gamma-amino ( 340) 1465 314.8 2.2e-85
XP_016877545 (OMIM: 137142) PREDICTED: gamma-amino ( 306) 1452 312.1 1.3e-84
XP_016877544 (OMIM: 137142) PREDICTED: gamma-amino ( 306) 1452 312.1 1.3e-84
NP_944494 (OMIM: 137164,607681,611277) gamma-amino ( 475) 1242 268.5 2.7e-71
NP_775807 (OMIM: 137166) gamma-aminobutyric acid r ( 465) 1237 267.5 5.5e-71
NP_000807 (OMIM: 137164,607681,611277) gamma-amino ( 467) 1236 267.3 6.4e-71
NP_150092 (OMIM: 600233) gamma-aminobutyric acid r ( 467) 1120 243.1 1.2e-63
XP_011519732 (OMIM: 600233) PREDICTED: gamma-amino ( 473) 1120 243.1 1.2e-63
NP_001191196 (OMIM: 137141) gamma-aminobutyric aci ( 484) 998 217.7 5.4e-56
XP_016863479 (OMIM: 137166) PREDICTED: gamma-amino ( 336) 985 214.9 2.6e-55
NP_004952 (OMIM: 300093) gamma-aminobutyric acid r ( 506) 982 214.4 5.6e-55
XP_011543798 (OMIM: 305990) PREDICTED: glycine rec ( 436) 961 210.0 1e-53
XP_006724550 (OMIM: 305990) PREDICTED: glycine rec ( 436) 961 210.0 1e-53
XP_011543797 (OMIM: 305990) PREDICTED: glycine rec ( 436) 961 210.0 1e-53
NP_002054 (OMIM: 305990) glycine receptor subunit ( 452) 961 210.0 1.1e-53
NP_001112357 (OMIM: 305990) glycine receptor subun ( 452) 961 210.0 1.1e-53
NP_001112358 (OMIM: 305990) glycine receptor subun ( 452) 959 209.6 1.4e-53
XP_016884916 (OMIM: 305990) PREDICTED: glycine rec ( 452) 959 209.6 1.4e-53
XP_016864838 (OMIM: 138491,149400) PREDICTED: glyc ( 465) 957 209.2 1.9e-53
NP_001139512 (OMIM: 138491,149400) glycine recepto ( 457) 956 209.0 2.2e-53
NP_000162 (OMIM: 138491,149400) glycine receptor s ( 449) 954 208.6 2.9e-53
NP_006520 (OMIM: 600421) glycine receptor subunit ( 464) 939 205.4 2.6e-52
XP_016864119 (OMIM: 600421) PREDICTED: glycine rec ( 424) 931 203.8 7.6e-52
XP_016877548 (OMIM: 600233) PREDICTED: gamma-amino ( 355) 886 194.3 4.3e-49
XP_016877547 (OMIM: 600233) PREDICTED: gamma-amino ( 361) 886 194.3 4.4e-49
NP_001036008 (OMIM: 600421) glycine receptor subun ( 449) 874 191.9 3e-48
XP_016884917 (OMIM: 305990) PREDICTED: glycine rec ( 363) 863 189.6 1.2e-47
XP_016884918 (OMIM: 305990) PREDICTED: glycine rec ( 363) 863 189.6 1.2e-47
NP_001165413 (OMIM: 305990) glycine receptor subun ( 363) 863 189.6 1.2e-47
>>NP_001121116 (OMIM: 137160,611136,615744) gamma-aminob (456 aa)
initn: 3039 init1: 3039 opt: 3039 Z-score: 3422.3 bits: 642.5 E(85289): 6.9e-184
Smith-Waterman score: 3039; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456)
10 20 30 40 50 60
pF1KE1 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
370 380 390 400 410 420
430 440 450
pF1KE1 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
::::::::::::::::::::::::::::::::::::
NP_001 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
430 440 450
>>NP_001121117 (OMIM: 137160,611136,615744) gamma-aminob (456 aa)
initn: 3039 init1: 3039 opt: 3039 Z-score: 3422.3 bits: 642.5 E(85289): 6.9e-184
Smith-Waterman score: 3039; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456)
10 20 30 40 50 60
pF1KE1 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
370 380 390 400 410 420
430 440 450
pF1KE1 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
::::::::::::::::::::::::::::::::::::
NP_001 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
430 440 450
>>NP_000797 (OMIM: 137160,611136,615744) gamma-aminobuty (456 aa)
initn: 3039 init1: 3039 opt: 3039 Z-score: 3422.3 bits: 642.5 E(85289): 6.9e-184
Smith-Waterman score: 3039; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456)
10 20 30 40 50 60
pF1KE1 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
370 380 390 400 410 420
430 440 450
pF1KE1 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
::::::::::::::::::::::::::::::::::::
NP_000 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
430 440 450
>>NP_001121120 (OMIM: 137160,611136,615744) gamma-aminob (456 aa)
initn: 3039 init1: 3039 opt: 3039 Z-score: 3422.3 bits: 642.5 E(85289): 6.9e-184
Smith-Waterman score: 3039; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456)
10 20 30 40 50 60
pF1KE1 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
370 380 390 400 410 420
430 440 450
pF1KE1 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
::::::::::::::::::::::::::::::::::::
NP_001 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
430 440 450
>>NP_001121115 (OMIM: 137160,611136,615744) gamma-aminob (456 aa)
initn: 3039 init1: 3039 opt: 3039 Z-score: 3422.3 bits: 642.5 E(85289): 6.9e-184
Smith-Waterman score: 3039; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456)
10 20 30 40 50 60
pF1KE1 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
370 380 390 400 410 420
430 440 450
pF1KE1 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
::::::::::::::::::::::::::::::::::::
NP_001 RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
430 440 450
>>XP_016863471 (OMIM: 103780,137140) PREDICTED: gamma-am (451 aa)
initn: 2258 init1: 1888 opt: 2255 Z-score: 2540.6 bits: 479.3 E(85289): 9e-135
Smith-Waterman score: 2255; 81.3% identity (91.9% similar) in 418 aa overlap (32-449:32-447)
10 20 30 40 50 60
pF1KE1 RKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPGL
.:: :.: :.::::::::::::::::::::
XP_016 KTKLNIYNMQFLLFVFLVWDPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKI
:. .::: :.:.::::::::: ::::::::::::.::::::::::::..:::::::::::
XP_016 GDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
::::::::::::::::::::::::::: .::::::::::::.:::::::::::::::.::
XP_016 WTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMT
::::::::: .::.: :: . . :: :: :::::::::::::.. . ..::::::.:::
XP_016 LKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPL
::::::::::::::::::::::::::::::::::::::::.:::::::: .: :: : .
XP_016 NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDK-KKEKASV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 IKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
. .::.:: ....:.:::.. :: :.::.:::: . :::.:: : ::::::::::::
XP_016 MIQNNAYAVAVANYAPNLSK-DPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSKIDR
370 380 390 400 410
430 440 450
pF1KE1 LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
.:::.::.::: :::::::::::::: :
XP_016 MSRIVFPVLFGTFNLVYWATYLNREPVLGVSP
420 430 440 450
>>NP_000798 (OMIM: 103780,137140) gamma-aminobutyric aci (451 aa)
initn: 2258 init1: 1888 opt: 2255 Z-score: 2540.6 bits: 479.3 E(85289): 9e-135
Smith-Waterman score: 2255; 81.3% identity (91.9% similar) in 418 aa overlap (32-449:32-447)
10 20 30 40 50 60
pF1KE1 RKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPGL
.:: :.: :.::::::::::::::::::::
NP_000 KTKLNIYNMQFLLFVFLVWDPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKI
:. .::: :.:.::::::::: ::::::::::::.::::::::::::..:::::::::::
NP_000 GDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
::::::::::::::::::::::::::: .::::::::::::.:::::::::::::::.::
NP_000 WTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMT
::::::::: .::.: :: . . :: :: :::::::::::::.. . ..::::::.:::
NP_000 LKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPL
::::::::::::::::::::::::::::::::::::::::.:::::::: .: :: : .
NP_000 NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDK-KKEKASV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 IKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
. .::.:: ....:.:::.. :: :.::.:::: . :::.:: : ::::::::::::
NP_000 MIQNNAYAVAVANYAPNLSK-DPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSKIDR
370 380 390 400 410
430 440 450
pF1KE1 LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
.:::.::.::: :::::::::::::: :
NP_000 MSRIVFPVLFGTFNLVYWATYLNREPVLGVSP
420 430 440 450
>>XP_016863472 (OMIM: 103780,137140) PREDICTED: gamma-am (451 aa)
initn: 2258 init1: 1888 opt: 2255 Z-score: 2540.6 bits: 479.3 E(85289): 9e-135
Smith-Waterman score: 2255; 81.3% identity (91.9% similar) in 418 aa overlap (32-449:32-447)
10 20 30 40 50 60
pF1KE1 RKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPGL
.:: :.: :.::::::::::::::::::::
XP_016 KTKLNIYNMQFLLFVFLVWDPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKI
:. .::: :.:.::::::::: ::::::::::::.::::::::::::..:::::::::::
XP_016 GDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
::::::::::::::::::::::::::: .::::::::::::.:::::::::::::::.::
XP_016 WTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMT
::::::::: .::.: :: . . :: :: :::::::::::::.. . ..::::::.:::
XP_016 LKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPL
::::::::::::::::::::::::::::::::::::::::.:::::::: .: :: : .
XP_016 NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDK-KKEKASV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 IKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
. .::.:: ....:.:::.. :: :.::.:::: . :::.:: : ::::::::::::
XP_016 MIQNNAYAVAVANYAPNLSK-DPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSKIDR
370 380 390 400 410
430 440 450
pF1KE1 LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
.:::.::.::: :::::::::::::: :
XP_016 MSRIVFPVLFGTFNLVYWATYLNREPVLGVSP
420 430 440 450
>>NP_001107647 (OMIM: 103780,137140) gamma-aminobutyric (451 aa)
initn: 2258 init1: 1888 opt: 2255 Z-score: 2540.6 bits: 479.3 E(85289): 9e-135
Smith-Waterman score: 2255; 81.3% identity (91.9% similar) in 418 aa overlap (32-449:32-447)
10 20 30 40 50 60
pF1KE1 RKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPGL
.:: :.: :.::::::::::::::::::::
NP_001 KTKLNIYNMQFLLFVFLVWDPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKI
:. .::: :.:.::::::::: ::::::::::::.::::::::::::..:::::::::::
NP_001 GDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
::::::::::::::::::::::::::: .::::::::::::.:::::::::::::::.::
NP_001 WTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMT
::::::::: .::.: :: . . :: :: :::::::::::::.. . ..::::::.:::
NP_001 LKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPL
::::::::::::::::::::::::::::::::::::::::.:::::::: .: :: : .
NP_001 NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDK-KKEKASV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 IKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
. .::.:: ....:.:::.. :: :.::.:::: . :::.:: : ::::::::::::
NP_001 MIQNNAYAVAVANYAPNLSK-DPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSKIDR
370 380 390 400 410
430 440 450
pF1KE1 LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
.:::.::.::: :::::::::::::: :
NP_001 MSRIVFPVLFGTFNLVYWATYLNREPVLGVSP
420 430 440 450
>>XP_005268315 (OMIM: 137142) PREDICTED: gamma-aminobuty (462 aa)
initn: 2077 init1: 1831 opt: 2113 Z-score: 2380.7 bits: 449.8 E(85289): 7.2e-126
Smith-Waterman score: 2113; 73.5% identity (86.0% similar) in 442 aa overlap (18-454:24-461)
10 20 30 40 50
pF1KE1 MRKSPGLSDCLWAWILLLSTLTGRS-YGQPSLQDELKDNTTVFTRILDRLLDGY
::. : : . :..:: .:: :.:::::: :::::
XP_005 MDNGMFSGFIMIKNLLLFCISMNLSSHFGFSQMPTSSVKDETNDNITIFTRILDGLLDGY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRL
:::::::::::.:.:.:::.::::::::: .::::::::::::::::::.::::: : :
XP_005 DNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 NNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDF
:::.:::::::::::::::::.::::: ::::::. .:::::::::::. :::::.::::
XP_005 NNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDF
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 PMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSS
:::::::::::::::: .:::: :: ..:::::::::::::: :.:::: . ...:
XP_005 PMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 TGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
::::..::.:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPE-
::::::::::::::::::::::::::::::::::::::::::::::::.:::::...
XP_005 TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAA
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 KPKKVKDPLIKKN-NTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKP-ETKPPEPK
: :: .. ...:. :... :. ::. : : : ... ::: : : : :
XP_005 KIKKKREVILNKSTNAFTTGKMSHPPNI----PKEQTPAGTSNTTSVSVKPSEEKTSESK
370 380 390 400 410
420 430 440 450
pF1KE1 KTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLK-APTPHQ
::.::.::::..:::.::.::: :::::::::::::: .: : .:
XP_005 KTYNSISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAASPK
420 430 440 450 460
456 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:13:28 2016 done: Mon Nov 7 00:13:29 2016
Total Scan time: 5.570 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]