Result of FASTA (omim) for
pFN21AE0929
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0929, 385 aa
1>>>pF1KE0929 385 - 385 aa - 385 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9743+/-0.000306; mu= 10.3122+/- 0.019
mean_var=128.7880+/-25.794, 0's: 0 Z-trim(120.1): 81 B-trim: 0 in 0/55
Lambda= 0.113015
statistics sampled from 34766 (34849) to 34766 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.75), E-opt: 0.2 (0.409), width: 16
Scan time: 9.360
The best scores are: opt bits E(85289)
NP_005986 (OMIM: 604648) T-box transcription facto ( 385) 2643 441.8 1.3e-123
XP_011543294 (OMIM: 604648) PREDICTED: T-box trans ( 430) 2631 439.9 5.5e-123
XP_011543295 (OMIM: 604648) PREDICTED: T-box trans ( 224) 1528 259.8 4.5e-69
XP_006724375 (OMIM: 187500,188400,192430,217095,60 ( 495) 1322 226.5 1.1e-58
XP_016884415 (OMIM: 187500,188400,192430,217095,60 ( 495) 1322 226.5 1.1e-58
NP_542378 (OMIM: 187500,188400,192430,217095,60205 ( 495) 1322 226.5 1.1e-58
XP_016884414 (OMIM: 187500,188400,192430,217095,60 ( 545) 1322 226.5 1.2e-58
NP_005983 (OMIM: 187500,188400,192430,217095,60205 ( 372) 1277 219.1 1.4e-56
NP_542377 (OMIM: 187500,188400,192430,217095,60205 ( 398) 1277 219.1 1.5e-56
XP_016884417 (OMIM: 187500,188400,192430,217095,60 ( 448) 1277 219.1 1.6e-56
NP_001071121 (OMIM: 606061,611363) T-box transcrip ( 447) 839 147.7 5.1e-35
NP_060958 (OMIM: 147891,601719) T-box transcriptio ( 545) 824 145.3 3.2e-34
XP_011523793 (OMIM: 147891,601719) PREDICTED: T-bo ( 608) 824 145.3 3.5e-34
NP_001159692 (OMIM: 606061,611363) T-box transcrip ( 297) 814 143.5 6.2e-34
XP_011523797 (OMIM: 147891,601719) PREDICTED: T-bo ( 417) 816 143.9 6.5e-34
NP_001308049 (OMIM: 147891,601719) T-box transcrip ( 546) 816 144.0 8e-34
XP_011523792 (OMIM: 147891,601719) PREDICTED: T-bo ( 609) 816 144.0 8.7e-34
XP_011534550 (OMIM: 143100,143400,604613) PREDICTE ( 377) 809 142.7 1.3e-33
XP_006715665 (OMIM: 143100,143400,604613) PREDICTE ( 364) 805 142.1 2e-33
XP_011534551 (OMIM: 143100,143400,604613) PREDICTE ( 372) 805 142.1 2.1e-33
XP_016866962 (OMIM: 143100,143400,604613) PREDICTE ( 376) 805 142.1 2.1e-33
XP_011534549 (OMIM: 143100,143400,604613) PREDICTE ( 379) 805 142.1 2.1e-33
NP_001073977 (OMIM: 143100,143400,604613) T-box tr ( 607) 805 142.2 3e-33
NP_005985 (OMIM: 600747) T-box transcription facto ( 712) 789 139.7 2.1e-32
NP_001317606 (OMIM: 260660,604127) T-box transcrip ( 602) 787 139.3 2.3e-32
XP_005271218 (OMIM: 260660,604127) PREDICTED: T-bo ( 635) 787 139.3 2.4e-32
NP_000183 (OMIM: 142900,601620) T-box transcriptio ( 518) 785 138.9 2.6e-32
NP_852259 (OMIM: 142900,601620) T-box transcriptio ( 518) 785 138.9 2.6e-32
XP_016875401 (OMIM: 142900,601620) PREDICTED: T-bo ( 534) 785 138.9 2.6e-32
NP_005987 (OMIM: 181450,601621) T-box transcriptio ( 723) 784 138.9 3.7e-32
NP_542448 (OMIM: 142900,601620) T-box transcriptio ( 468) 769 136.3 1.4e-31
NP_689593 (OMIM: 260660,604127) T-box transcriptio ( 496) 768 136.1 1.7e-31
NP_001103348 (OMIM: 300307,302905,303400) T-box tr ( 520) 754 133.9 8.5e-31
NP_058650 (OMIM: 300307,302905,303400) T-box trans ( 520) 754 133.9 8.5e-31
XP_005262193 (OMIM: 300307,302905,303400) PREDICTE ( 521) 748 132.9 1.7e-30
NP_004599 (OMIM: 122600,602427) T-box transcriptio ( 436) 744 132.2 2.3e-30
XP_016879103 (OMIM: 122600,602427) PREDICTED: T-bo ( 436) 744 132.2 2.3e-30
XP_005255580 (OMIM: 122600,602427) PREDICTED: T-bo ( 436) 744 132.2 2.3e-30
XP_011544228 (OMIM: 122600,602427) PREDICTED: T-bo ( 436) 744 132.2 2.3e-30
XP_006724720 (OMIM: 300307,302905,303400) PREDICTE ( 350) 731 130.0 8.4e-30
XP_016866961 (OMIM: 143100,143400,604613) PREDICTE ( 449) 717 127.8 5e-29
XP_016877522 (OMIM: 616061) PREDICTED: MAX gene-as (1439) 648 116.9 3e-25
XP_011519703 (OMIM: 616061) PREDICTED: MAX gene-as (1549) 648 116.9 3.2e-25
XP_016877519 (OMIM: 616061) PREDICTED: MAX gene-as (2207) 648 117.0 4.2e-25
NP_001074010 (OMIM: 616061) MAX gene-associated pr (2856) 648 117.1 5.2e-25
XP_005254310 (OMIM: 616061) PREDICTED: MAX gene-as (2906) 648 117.1 5.3e-25
XP_005254309 (OMIM: 616061) PREDICTED: MAX gene-as (2956) 648 117.1 5.3e-25
XP_011519700 (OMIM: 616061) PREDICTED: MAX gene-as (3004) 648 117.1 5.4e-25
XP_011519699 (OMIM: 616061) PREDICTED: MAX gene-as (3005) 648 117.1 5.4e-25
NP_001157745 (OMIM: 616061) MAX gene-associated pr (3065) 648 117.1 5.5e-25
>>NP_005986 (OMIM: 604648) T-box transcription factor TB (385 aa)
initn: 2643 init1: 2643 opt: 2643 Z-score: 2340.3 bits: 441.8 E(85289): 1.3e-123
Smith-Waterman score: 2643; 100.0% identity (100.0% similar) in 385 aa overlap (1-385:1-385)
10 20 30 40 50 60
pF1KE0 MAAFLSAGLGILAPSETYPLPTTSSGWEPRLGSPFPSGPCTSSTGAQAVAEPTGQGPKNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAAFLSAGLGILAPSETYPLPTTSSGWEPRLGSPFPSGPCTSSTGAQAVAEPTGQGPKNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RVSRVTVQLEMKPLWEEFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RVSRVTVQLEMKPLWEEFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DDKRYRYAFHSSAWLVAGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DDKRYRYAFHSSAWLVAGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 NGHIILNSMHRYQPRFHVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NGHIILNSMHRYQPRFHVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IASNPFAKGFRESDLDSWPVAPRPLLSVPARSHSSLSPCVLKGATDREKDPNKASASTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IASNPFAKGFRESDLDSWPVAPRPLLSVPARSHSSLSPCVLKGATDREKDPNKASASTSK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TPAWLHHQLLPPPEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TPAWLHHQLLPPPEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQG
310 320 330 340 350 360
370 380
pF1KE0 GLPLPAGLGLLSPTVVCLGPGQDSQ
:::::::::::::::::::::::::
NP_005 GLPLPAGLGLLSPTVVCLGPGQDSQ
370 380
>>XP_011543294 (OMIM: 604648) PREDICTED: T-box transcrip (430 aa)
initn: 2631 init1: 2631 opt: 2631 Z-score: 2329.0 bits: 439.9 E(85289): 5.5e-123
Smith-Waterman score: 2631; 100.0% identity (100.0% similar) in 383 aa overlap (3-385:48-430)
10 20 30
pF1KE0 MAAFLSAGLGILAPSETYPLPTTSSGWEPRLG
::::::::::::::::::::::::::::::
XP_011 FLEEEAYRCSLKDKSWLGDAWGPHFRPLSTAFLSAGLGILAPSETYPLPTTSSGWEPRLG
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 SPFPSGPCTSSTGAQAVAEPTGQGPKNPRVSRVTVQLEMKPLWEEFNQLGTEMIVTKAGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPFPSGPCTSSTGAQAVAEPTGQGPKNPRVSRVTVQLEMKPLWEEFNQLGTEMIVTKAGR
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 RMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLVAGKADPATPGRVHFHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLVAGKADPATPGRVHFHP
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 DSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVFVDPRKDSERYAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVFVDPRKDSERYAQ
200 210 220 230 240 250
220 230 240 250 260 270
pF1KE0 ENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLDSWPVAPRPLLSVPARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLDSWPVAPRPLLSVPARS
260 270 280 290 300 310
280 290 300 310 320 330
pF1KE0 HSSLSPCVLKGATDREKDPNKASASTSKTPAWLHHQLLPPPEVLLAPATYRPVTYQSLYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSSLSPCVLKGATDREKDPNKASASTSKTPAWLHHQLLPPPEVLLAPATYRPVTYQSLYS
320 330 340 350 360 370
340 350 360 370 380
pF1KE0 GAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGLGLLSPTVVCLGPGQDSQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGLGLLSPTVVCLGPGQDSQ
380 390 400 410 420 430
>>XP_011543295 (OMIM: 604648) PREDICTED: T-box transcrip (224 aa)
initn: 1528 init1: 1528 opt: 1528 Z-score: 1361.1 bits: 259.8 E(85289): 4.5e-69
Smith-Waterman score: 1528; 100.0% identity (100.0% similar) in 224 aa overlap (162-385:1-224)
140 150 160 170 180 190
pF1KE0 SAWLVAGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHR
::::::::::::::::::::::::::::::
XP_011 MRQIVSFDKLKLTNNLLDDNGHIILNSMHR
10 20 30
200 210 220 230 240 250
pF1KE0 YQPRFHVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YQPRFHVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFR
40 50 60 70 80 90
260 270 280 290 300 310
pF1KE0 ESDLDSWPVAPRPLLSVPARSHSSLSPCVLKGATDREKDPNKASASTSKTPAWLHHQLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESDLDSWPVAPRPLLSVPARSHSSLSPCVLKGATDREKDPNKASASTSKTPAWLHHQLLP
100 110 120 130 140 150
320 330 340 350 360 370
pF1KE0 PPEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGLGLL
160 170 180 190 200 210
380
pF1KE0 SPTVVCLGPGQDSQ
::::::::::::::
XP_011 SPTVVCLGPGQDSQ
220
>>XP_006724375 (OMIM: 187500,188400,192430,217095,602054 (495 aa)
initn: 1309 init1: 1244 opt: 1322 Z-score: 1174.7 bits: 226.5 E(85289): 1.1e-58
Smith-Waterman score: 1325; 58.0% identity (71.2% similar) in 386 aa overlap (6-364:32-411)
10 20 30
pF1KE0 MAAFLSAGLGILAPSETYPLPTT---SSGWEPRLG
: : .: : : : .. :
XP_006 HFSTVTRDMEAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAP
10 20 30 40 50 60
40 50 60 70
pF1KE0 SPFP---SGPCTSSTGA--QAVAEPTGQG---------P--KNPRVSRVTVQLEMKPLWE
.: : . : . ..:: .:.::: : : : :: .:. :.:::::: ::.
XP_006 GPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWD
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE0 EFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLV
:::::::::::::::::::: ::::..::: .::: :::::.:.::::::::::::.:::
XP_006 EFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLV
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE0 AGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
:::::::::::::.::::::::::::.:::::::::::::::::::::::::::::::::
XP_006 AGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE0 HVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLD
:::.::::::::.::.::::.:.: ::.:::::::::::::::::::::::::::. : .
XP_006 HVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPE
250 260 270 280 290 300
260 270 280 290 300
pF1KE0 SWPVAPRP----LLSVPARSHSSL-SPCVLKGATDREKDPNKASASTSKT---PAWLHHQ
.:: :: :.:. :::.. . :: .:. ::: .: .. :: :
XP_006 DWPRNHRPGALPLMSAFARSRNPVASPTQPSGT---EKDAAEARREFQRDAGGPAVLGDP
310 320 330 340 350
310 320 330 340 350 360
pF1KE0 LLPPPEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGL
:: ::: . . . .: : : ::.: : :..: . .. ::
XP_006 AHPPQ--LLARVLSPSLPGAGGAGGLVPLPGAPGGRPSP-PNPELRLEAPGASEPLHHHP
360 370 380 390 400 410
370 380
pF1KE0 GLLSPTVVCLGPGQDSQ
XP_006 YKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHHHHHPVSPAAAAAAAAAAAAAA
420 430 440 450 460 470
>>XP_016884415 (OMIM: 187500,188400,192430,217095,602054 (495 aa)
initn: 1309 init1: 1244 opt: 1322 Z-score: 1174.7 bits: 226.5 E(85289): 1.1e-58
Smith-Waterman score: 1325; 58.0% identity (71.2% similar) in 386 aa overlap (6-364:32-411)
10 20 30
pF1KE0 MAAFLSAGLGILAPSETYPLPTT---SSGWEPRLG
: : .: : : : .. :
XP_016 HFSTVTRDMEAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAP
10 20 30 40 50 60
40 50 60 70
pF1KE0 SPFP---SGPCTSSTGA--QAVAEPTGQG---------P--KNPRVSRVTVQLEMKPLWE
.: : . : . ..:: .:.::: : : : :: .:. :.:::::: ::.
XP_016 GPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWD
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE0 EFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLV
:::::::::::::::::::: ::::..::: .::: :::::.:.::::::::::::.:::
XP_016 EFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLV
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE0 AGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
:::::::::::::.::::::::::::.:::::::::::::::::::::::::::::::::
XP_016 AGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE0 HVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLD
:::.::::::::.::.::::.:.: ::.:::::::::::::::::::::::::::. : .
XP_016 HVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPE
250 260 270 280 290 300
260 270 280 290 300
pF1KE0 SWPVAPRP----LLSVPARSHSSL-SPCVLKGATDREKDPNKASASTSKT---PAWLHHQ
.:: :: :.:. :::.. . :: .:. ::: .: .. :: :
XP_016 DWPRNHRPGALPLMSAFARSRNPVASPTQPSGT---EKDAAEARREFQRDAGGPAVLGDP
310 320 330 340 350
310 320 330 340 350 360
pF1KE0 LLPPPEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGL
:: ::: . . . .: : : ::.: : :..: . .. ::
XP_016 AHPPQ--LLARVLSPSLPGAGGAGGLVPLPGAPGGRPSP-PNPELRLEAPGASEPLHHHP
360 370 380 390 400 410
370 380
pF1KE0 GLLSPTVVCLGPGQDSQ
XP_016 YKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHHHHHPVSPAAAAAAAAAAAAAA
420 430 440 450 460 470
>>NP_542378 (OMIM: 187500,188400,192430,217095,602054) T (495 aa)
initn: 1309 init1: 1244 opt: 1322 Z-score: 1174.7 bits: 226.5 E(85289): 1.1e-58
Smith-Waterman score: 1325; 58.0% identity (71.2% similar) in 386 aa overlap (6-364:32-411)
10 20 30
pF1KE0 MAAFLSAGLGILAPSETYPLPTT---SSGWEPRLG
: : .: : : : .. :
NP_542 HFSTVTRDMEAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAP
10 20 30 40 50 60
40 50 60 70
pF1KE0 SPFP---SGPCTSSTGA--QAVAEPTGQG---------P--KNPRVSRVTVQLEMKPLWE
.: : . : . ..:: .:.::: : : : :: .:. :.:::::: ::.
NP_542 GPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWD
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE0 EFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLV
:::::::::::::::::::: ::::..::: .::: :::::.:.::::::::::::.:::
NP_542 EFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLV
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE0 AGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
:::::::::::::.::::::::::::.:::::::::::::::::::::::::::::::::
NP_542 AGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE0 HVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLD
:::.::::::::.::.::::.:.: ::.:::::::::::::::::::::::::::. : .
NP_542 HVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPE
250 260 270 280 290 300
260 270 280 290 300
pF1KE0 SWPVAPRP----LLSVPARSHSSL-SPCVLKGATDREKDPNKASASTSKT---PAWLHHQ
.:: :: :.:. :::.. . :: .:. ::: .: .. :: :
NP_542 DWPRNHRPGALPLMSAFARSRNPVASPTQPSGT---EKDAAEARREFQRDAGGPAVLGDP
310 320 330 340 350
310 320 330 340 350 360
pF1KE0 LLPPPEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGL
:: ::: . . . .: : : ::.: : :..: . .. ::
NP_542 AHPPQ--LLARVLSPSLPGAGGAGGLVPLPGAPGGRPSP-PNPELRLEAPGASEPLHHHP
360 370 380 390 400 410
370 380
pF1KE0 GLLSPTVVCLGPGQDSQ
NP_542 YKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHHHHHPVSPAAAAAAAAAAAAAA
420 430 440 450 460 470
>>XP_016884414 (OMIM: 187500,188400,192430,217095,602054 (545 aa)
initn: 1309 init1: 1244 opt: 1322 Z-score: 1174.1 bits: 226.5 E(85289): 1.2e-58
Smith-Waterman score: 1325; 58.0% identity (71.2% similar) in 386 aa overlap (6-364:82-461)
10 20 30
pF1KE0 MAAFLSAGLGILAPSETYPLPTT---SSGWEPRLG
: : .: : : : .. :
XP_016 HFSTVTRDMEAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAP
60 70 80 90 100 110
40 50 60 70
pF1KE0 SPFP---SGPCTSSTGA--QAVAEPTGQG---------P--KNPRVSRVTVQLEMKPLWE
.: : . : . ..:: .:.::: : : : :: .:. :.:::::: ::.
XP_016 GPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWD
120 130 140 150 160 170
80 90 100 110 120 130
pF1KE0 EFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLV
:::::::::::::::::::: ::::..::: .::: :::::.:.::::::::::::.:::
XP_016 EFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLV
180 190 200 210 220 230
140 150 160 170 180 190
pF1KE0 AGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
:::::::::::::.::::::::::::.:::::::::::::::::::::::::::::::::
XP_016 AGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
240 250 260 270 280 290
200 210 220 230 240 250
pF1KE0 HVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLD
:::.::::::::.::.::::.:.: ::.:::::::::::::::::::::::::::. : .
XP_016 HVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPE
300 310 320 330 340 350
260 270 280 290 300
pF1KE0 SWPVAPRP----LLSVPARSHSSL-SPCVLKGATDREKDPNKASASTSKT---PAWLHHQ
.:: :: :.:. :::.. . :: .:. ::: .: .. :: :
XP_016 DWPRNHRPGALPLMSAFARSRNPVASPTQPSGT---EKDAAEARREFQRDAGGPAVLGDP
360 370 380 390 400
310 320 330 340 350 360
pF1KE0 LLPPPEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGL
:: ::: . . . .: : : ::.: : :..: . .. ::
XP_016 AHPPQ--LLARVLSPSLPGAGGAGGLVPLPGAPGGRPSP-PNPELRLEAPGASEPLHHHP
410 420 430 440 450 460
370 380
pF1KE0 GLLSPTVVCLGPGQDSQ
XP_016 YKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHHHHHPVSPAAAAAAAAAAAAAA
470 480 490 500 510 520
>>NP_005983 (OMIM: 187500,188400,192430,217095,602054) T (372 aa)
initn: 1244 init1: 1244 opt: 1277 Z-score: 1136.8 bits: 219.1 E(85289): 1.4e-56
Smith-Waterman score: 1280; 61.8% identity (76.7% similar) in 330 aa overlap (6-312:32-357)
10 20 30
pF1KE0 MAAFLSAGLGILAPSETYPLPTT---SSGWEPRLG
: : .: : : : .. :
NP_005 HFSTVTRDMEAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAP
10 20 30 40 50 60
40 50 60 70
pF1KE0 SPFP---SGPCTSSTGA--QAVAEPTGQG---------P--KNPRVSRVTVQLEMKPLWE
.: : . : . ..:: .:.::: : : : :: .:. :.:::::: ::.
NP_005 GPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWD
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE0 EFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLV
:::::::::::::::::::: ::::..::: .::: :::::.:.::::::::::::.:::
NP_005 EFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLV
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE0 AGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
:::::::::::::.::::::::::::.:::::::::::::::::::::::::::::::::
NP_005 AGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE0 HVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLD
:::.::::::::.::.::::.:.: ::.:::::::::::::::::::::::::::. : .
NP_005 HVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPE
250 260 270 280 290 300
260 270 280 290 300 310
pF1KE0 SWPVAPRP----LLSVPARSHSSLSPCVLKGATDREKDPNKASASTSKTPAWLHHQLLPP
.:: :: :.:. :::.. .. . ..:.. . .. ... :. : : ::
NP_005 DWPRNHRPGALPLMSAFARSRNPVASPTQPSGTEK----GLVTEGSGLQPGLLDVLLKPP
310 320 330 340 350
320 330 340 350 360 370
pF1KE0 PEVLLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPLPAGLGLLS
NP_005 SKKSESLRPPHCKDT
360 370
>>NP_542377 (OMIM: 187500,188400,192430,217095,602054) T (398 aa)
initn: 1266 init1: 1244 opt: 1277 Z-score: 1136.4 bits: 219.1 E(85289): 1.5e-56
Smith-Waterman score: 1282; 58.8% identity (73.3% similar) in 359 aa overlap (6-333:32-390)
10 20 30
pF1KE0 MAAFLSAGLGILAPSETYPLPTT---SSGWEPRLG
: : .: : : : .. :
NP_542 HFSTVTRDMEAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAP
10 20 30 40 50 60
40 50 60 70
pF1KE0 SPFP---SGPCTSSTGA--QAVAEPTGQG---------P--KNPRVSRVTVQLEMKPLWE
.: : . : . ..:: .:.::: : : : :: .:. :.:::::: ::.
NP_542 GPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWD
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE0 EFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLV
:::::::::::::::::::: ::::..::: .::: :::::.:.::::::::::::.:::
NP_542 EFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLV
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE0 AGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
:::::::::::::.::::::::::::.:::::::::::::::::::::::::::::::::
NP_542 AGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE0 HVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLD
:::.::::::::.::.::::.:.: ::.:::::::::::::::::::::::::::. : .
NP_542 HVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPE
250 260 270 280 290 300
260 270 280 290 300
pF1KE0 SWPVAPRP----LLSVPARSHSSLSPCVLKGATDRE----KDPNKASASTSKTPAWLHHQ
.:: :: :.:. :::.. .. . ..:.. :: . . .. .:: .
NP_542 DWPRNHRPGALPLMSAFARSRNPVASPTQPSGTEKGGHVLKDKEVKAETSRNTPEREVEL
310 320 330 340 350 360
310 320 330 340 350 360
pF1KE0 LLPPPEV----LLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPL
: : :: .: . :.: .:
NP_542 LRDAGGCVNLGLPCPAECQPFNTQGLVAGRTAGDRLC
370 380 390
>>XP_016884417 (OMIM: 187500,188400,192430,217095,602054 (448 aa)
initn: 1266 init1: 1244 opt: 1277 Z-score: 1135.6 bits: 219.1 E(85289): 1.6e-56
Smith-Waterman score: 1282; 58.8% identity (73.3% similar) in 359 aa overlap (6-333:82-440)
10 20 30
pF1KE0 MAAFLSAGLGILAPSETYPLPTT---SSGWEPRLG
: : .: : : : .. :
XP_016 HFSTVTRDMEAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAP
60 70 80 90 100 110
40 50 60 70
pF1KE0 SPFP---SGPCTSSTGA--QAVAEPTGQG---------P--KNPRVSRVTVQLEMKPLWE
.: : . : . ..:: .:.::: : : : :: .:. :.:::::: ::.
XP_016 GPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWD
120 130 140 150 160 170
80 90 100 110 120 130
pF1KE0 EFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSAWLV
:::::::::::::::::::: ::::..::: .::: :::::.:.::::::::::::.:::
XP_016 EFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLV
180 190 200 210 220 230
140 150 160 170 180 190
pF1KE0 AGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
:::::::::::::.::::::::::::.:::::::::::::::::::::::::::::::::
XP_016 AGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF
240 250 260 270 280 290
200 210 220 230 240 250
pF1KE0 HVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFRESDLD
:::.::::::::.::.::::.:.: ::.:::::::::::::::::::::::::::. : .
XP_016 HVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPE
300 310 320 330 340 350
260 270 280 290 300
pF1KE0 SWPVAPRP----LLSVPARSHSSLSPCVLKGATDRE----KDPNKASASTSKTPAWLHHQ
.:: :: :.:. :::.. .. . ..:.. :: . . .. .:: .
XP_016 DWPRNHRPGALPLMSAFARSRNPVASPTQPSGTEKGGHVLKDKEVKAETSRNTPEREVEL
360 370 380 390 400 410
310 320 330 340 350 360
pF1KE0 LLPPPEV----LLAPATYRPVTYQSLYSGAPSHLGIPRTRPAPYPLPNIRADRDQGGLPL
: : :: .: . :.: .:
XP_016 LRDAGGCVNLGLPCPAECQPFNTQGLVAGRTAGDRLC
420 430 440
385 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 02:23:26 2016 done: Sun Nov 6 02:23:28 2016
Total Scan time: 9.360 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]