Result of FASTA (omim) for
pFN21AE0917
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0917, 288 aa
1>>>pF1KE0917 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6714+/-0.000469; mu= 6.7851+/- 0.030
mean_var=333.8273+/-70.126, 0's: 0 Z-trim(119.1): 335 B-trim: 1072 in 1/60
Lambda= 0.070196
statistics sampled from 32314 (32740) to 32314 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.384), width: 16
Scan time: 7.170
The best scores are: opt bits E(85289)
NP_004584 (OMIM: 602719) transformer-2 protein hom ( 288) 1972 213.2 4.8e-55
XP_005247760 (OMIM: 602719) PREDICTED: transformer ( 188) 1319 146.8 3.1e-35
XP_016862522 (OMIM: 602719) PREDICTED: transformer ( 188) 1319 146.8 3.1e-35
NP_001230808 (OMIM: 602719) transformer-2 protein ( 188) 1319 146.8 3.1e-35
XP_011511374 (OMIM: 602719) PREDICTED: transformer ( 188) 1319 146.8 3.1e-35
NP_037425 (OMIM: 602718) transformer-2 protein hom ( 282) 1163 131.2 2.2e-30
NP_001269686 (OMIM: 602718) transformer-2 protein ( 181) 838 98.0 1.4e-20
NP_001269687 (OMIM: 602718) transformer-2 protein ( 181) 838 98.0 1.4e-20
XP_005249782 (OMIM: 602718) PREDICTED: transformer ( 181) 838 98.0 1.4e-20
XP_016867579 (OMIM: 602718) PREDICTED: transformer ( 181) 838 98.0 1.4e-20
XP_016867578 (OMIM: 602718) PREDICTED: transformer ( 181) 838 98.0 1.4e-20
NP_001269688 (OMIM: 602718) transformer-2 protein ( 180) 819 96.1 5.2e-20
XP_011513633 (OMIM: 602718) PREDICTED: transformer ( 219) 443 58.1 1.7e-08
NP_001287758 (OMIM: 602649) cold-inducible RNA-bin ( 297) 359 49.8 7.2e-06
NP_001287744 (OMIM: 602649) cold-inducible RNA-bin ( 168) 347 48.2 1.2e-05
XP_016881726 (OMIM: 602649) PREDICTED: cold-induci ( 168) 347 48.2 1.2e-05
XP_006722700 (OMIM: 602649) PREDICTED: cold-induci ( 172) 347 48.3 1.2e-05
NP_001271 (OMIM: 602649) cold-inducible RNA-bindin ( 172) 347 48.3 1.2e-05
XP_011525970 (OMIM: 602649) PREDICTED: cold-induci ( 202) 347 48.4 1.4e-05
XP_016883627 (OMIM: 604739) PREDICTED: RNA-binding ( 476) 311 45.3 0.00027
NP_001229529 (OMIM: 604739) RNA-binding protein 39 ( 502) 311 45.3 0.00028
NP_001229528 (OMIM: 604739) RNA-binding protein 39 ( 508) 311 45.3 0.00028
NP_001287866 (OMIM: 605221) serine/arginine-rich s ( 217) 302 43.9 0.00033
NP_473357 (OMIM: 605221) serine/arginine-rich spli ( 262) 302 44.0 0.00037
NP_001177934 (OMIM: 605221) serine/arginine-rich s ( 261) 289 42.7 0.00092
NP_006734 (OMIM: 300027) RNA-binding protein 3 [Ho ( 157) 277 41.1 0.0016
NP_115285 (OMIM: 603269) serine/arginine-rich spli ( 282) 279 41.7 0.0019
XP_016872631 (OMIM: 603269) PREDICTED: serine/argi ( 282) 279 41.7 0.0019
NP_001177935 (OMIM: 605221) serine/arginine-rich s ( 173) 275 41.0 0.002
NP_006616 (OMIM: 605221) serine/arginine-rich spli ( 183) 273 40.8 0.0023
NP_001177938 (OMIM: 605221) serine/arginine-rich s ( 165) 271 40.5 0.0025
NP_001287865 (OMIM: 605221) serine/arginine-rich s ( 172) 271 40.6 0.0026
NP_001177936 (OMIM: 605221) serine/arginine-rich s ( 182) 271 40.6 0.0027
NP_001182356 (OMIM: 600813) serine/arginine-rich s ( 221) 261 39.7 0.006
NP_003007 (OMIM: 600813) serine/arginine-rich spli ( 221) 261 39.7 0.006
XP_016880431 (OMIM: 600813) PREDICTED: serine/argi ( 221) 261 39.7 0.006
NP_003080 (OMIM: 180740) U1 small nuclear ribonucl ( 437) 265 40.6 0.0065
NP_001287998 (OMIM: 180740) U1 small nuclear ribon ( 428) 260 40.1 0.0092
>>NP_004584 (OMIM: 602719) transformer-2 protein homolog (288 aa)
initn: 1972 init1: 1972 opt: 1972 Z-score: 1109.3 bits: 213.2 E(85289): 4.8e-55
Smith-Waterman score: 1972; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KE0 MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY
190 200 210 220 230 240
250 260 270 280
pF1KE0 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
250 260 270 280
>>XP_005247760 (OMIM: 602719) PREDICTED: transformer-2 p (188 aa)
initn: 1319 init1: 1319 opt: 1319 Z-score: 753.7 bits: 146.8 E(85289): 3.1e-35
Smith-Waterman score: 1319; 100.0% identity (100.0% similar) in 188 aa overlap (101-288:1-188)
80 90 100 110 120 130
pF1KE0 SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
::::::::::::::::::::::::::::::
XP_005 MSTRRRHVGNRANPDPNCCLGVFGLSLYTT
10 20 30
140 150 160 170 180 190
pF1KE0 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE0 VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGW
100 110 120 130 140 150
260 270 280
pF1KE0 RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
::::::::::::::::::::::::::::::::::::::
XP_005 RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
160 170 180
>>XP_016862522 (OMIM: 602719) PREDICTED: transformer-2 p (188 aa)
initn: 1319 init1: 1319 opt: 1319 Z-score: 753.7 bits: 146.8 E(85289): 3.1e-35
Smith-Waterman score: 1319; 100.0% identity (100.0% similar) in 188 aa overlap (101-288:1-188)
80 90 100 110 120 130
pF1KE0 SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
::::::::::::::::::::::::::::::
XP_016 MSTRRRHVGNRANPDPNCCLGVFGLSLYTT
10 20 30
140 150 160 170 180 190
pF1KE0 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE0 VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGW
100 110 120 130 140 150
260 270 280
pF1KE0 RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
::::::::::::::::::::::::::::::::::::::
XP_016 RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
160 170 180
>>NP_001230808 (OMIM: 602719) transformer-2 protein homo (188 aa)
initn: 1319 init1: 1319 opt: 1319 Z-score: 753.7 bits: 146.8 E(85289): 3.1e-35
Smith-Waterman score: 1319; 100.0% identity (100.0% similar) in 188 aa overlap (101-288:1-188)
80 90 100 110 120 130
pF1KE0 SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
::::::::::::::::::::::::::::::
NP_001 MSTRRRHVGNRANPDPNCCLGVFGLSLYTT
10 20 30
140 150 160 170 180 190
pF1KE0 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE0 VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGW
100 110 120 130 140 150
260 270 280
pF1KE0 RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
::::::::::::::::::::::::::::::::::::::
NP_001 RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
160 170 180
>>XP_011511374 (OMIM: 602719) PREDICTED: transformer-2 p (188 aa)
initn: 1319 init1: 1319 opt: 1319 Z-score: 753.7 bits: 146.8 E(85289): 3.1e-35
Smith-Waterman score: 1319; 100.0% identity (100.0% similar) in 188 aa overlap (101-288:1-188)
80 90 100 110 120 130
pF1KE0 SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
::::::::::::::::::::::::::::::
XP_011 MSTRRRHVGNRANPDPNCCLGVFGLSLYTT
10 20 30
140 150 160 170 180 190
pF1KE0 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE0 VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGW
100 110 120 130 140 150
260 270 280
pF1KE0 RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
::::::::::::::::::::::::::::::::::::::
XP_011 RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
160 170 180
>>NP_037425 (OMIM: 602718) transformer-2 protein homolog (282 aa)
initn: 986 init1: 800 opt: 1163 Z-score: 666.6 bits: 131.2 E(85289): 2.2e-30
Smith-Waterman score: 1189; 65.2% identity (78.7% similar) in 305 aa overlap (1-288:1-282)
10 20 30 40 50
pF1KE0 MSDSGEQNYGERESRSASRSGSAHGSG-KSARHTPARSRSKEDSRRSRSKSRSRSESRSR
::: :.:. ::::: :.: .. . :: .. .:: :. :..:.:.:::::.::::
NP_037 MSDVEENNFEGRESRSQSKSPTGTPARVKSESRSGSRSPSRV-SKHSESHSRSRSKSRSR
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 SRRSSRRHYTRSRSRSRSHRR-SRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNC
::: :.:.::::::.:.:::: ::::::. .::::.:.::::::.::::.:.:::::::
NP_037 SRRHSHRRYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 CLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER
:::::::::::::::::::::.:::.. :..::::.. ::::::::::: .::.::: ::
NP_037 CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMER
120 130 140 150 160 170
180 190 200 210 220
pF1KE0 ANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY--------------GSSRRRD-YYD
::::::::::::::.::::: :::::::::::::. :..:::: :::
NP_037 ANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYD
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 RGYDRGYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSY
:::::::: . :. :: :::::::::::: ::::::::::
NP_037 RGYDRGYDRYEDYD--YR------------------YRRRSPSPYYSR--YRSRSRSRSY
240 250 260 270
pF1KE0 SPRRY
:::::
NP_037 SPRRY
280
>>NP_001269686 (OMIM: 602718) transformer-2 protein homo (181 aa)
initn: 871 init1: 658 opt: 838 Z-score: 490.6 bits: 98.0 E(85289): 1.4e-20
Smith-Waterman score: 864; 68.5% identity (77.3% similar) in 203 aa overlap (101-288:1-181)
80 90 100 110 120 130
pF1KE0 SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
::.::::.:.::::::: ::::::::::::
NP_001 MSNRRRHTGSRANPDPNTCLGVFGLSLYTT
10 20 30
140 150 160 170 180 190
pF1KE0 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
:::::::::.:::.. :..::::.. ::::::::::: .::.::: ::::::::::::::
NP_001 ERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR
40 50 60 70 80 90
200 210 220 230
pF1KE0 VDFSITKRPHTPTPGIYMGRPTY--------------GSSRRRD-YYDRGYDRGYDDRDY
::.::::: :::::::::::::. :..:::: ::::::::::: .
NP_001 VDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYED
100 110 120 130 140 150
240 250 260 270 280
pF1KE0 YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
: .:: :::::::::::: :::::::::::::::
NP_001 Y--DYR------------------YRRRSPSPYYSR--YRSRSRSRSYSPRRY
160 170 180
>>NP_001269687 (OMIM: 602718) transformer-2 protein homo (181 aa)
initn: 871 init1: 658 opt: 838 Z-score: 490.6 bits: 98.0 E(85289): 1.4e-20
Smith-Waterman score: 864; 68.5% identity (77.3% similar) in 203 aa overlap (101-288:1-181)
80 90 100 110 120 130
pF1KE0 SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
::.::::.:.::::::: ::::::::::::
NP_001 MSNRRRHTGSRANPDPNTCLGVFGLSLYTT
10 20 30
140 150 160 170 180 190
pF1KE0 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
:::::::::.:::.. :..::::.. ::::::::::: .::.::: ::::::::::::::
NP_001 ERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR
40 50 60 70 80 90
200 210 220 230
pF1KE0 VDFSITKRPHTPTPGIYMGRPTY--------------GSSRRRD-YYDRGYDRGYDDRDY
::.::::: :::::::::::::. :..:::: ::::::::::: .
NP_001 VDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYED
100 110 120 130 140 150
240 250 260 270 280
pF1KE0 YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
: .:: :::::::::::: :::::::::::::::
NP_001 Y--DYR------------------YRRRSPSPYYSR--YRSRSRSRSYSPRRY
160 170 180
>>XP_005249782 (OMIM: 602718) PREDICTED: transformer-2 p (181 aa)
initn: 871 init1: 658 opt: 838 Z-score: 490.6 bits: 98.0 E(85289): 1.4e-20
Smith-Waterman score: 864; 68.5% identity (77.3% similar) in 203 aa overlap (101-288:1-181)
80 90 100 110 120 130
pF1KE0 SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
::.::::.:.::::::: ::::::::::::
XP_005 MSNRRRHTGSRANPDPNTCLGVFGLSLYTT
10 20 30
140 150 160 170 180 190
pF1KE0 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
:::::::::.:::.. :..::::.. ::::::::::: .::.::: ::::::::::::::
XP_005 ERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR
40 50 60 70 80 90
200 210 220 230
pF1KE0 VDFSITKRPHTPTPGIYMGRPTY--------------GSSRRRD-YYDRGYDRGYDDRDY
::.::::: :::::::::::::. :..:::: ::::::::::: .
XP_005 VDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYED
100 110 120 130 140 150
240 250 260 270 280
pF1KE0 YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
: .:: :::::::::::: :::::::::::::::
XP_005 Y--DYR------------------YRRRSPSPYYSR--YRSRSRSRSYSPRRY
160 170 180
>>XP_016867579 (OMIM: 602718) PREDICTED: transformer-2 p (181 aa)
initn: 871 init1: 658 opt: 838 Z-score: 490.6 bits: 98.0 E(85289): 1.4e-20
Smith-Waterman score: 864; 68.5% identity (77.3% similar) in 203 aa overlap (101-288:1-181)
80 90 100 110 120 130
pF1KE0 SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
::.::::.:.::::::: ::::::::::::
XP_016 MSNRRRHTGSRANPDPNTCLGVFGLSLYTT
10 20 30
140 150 160 170 180 190
pF1KE0 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
:::::::::.:::.. :..::::.. ::::::::::: .::.::: ::::::::::::::
XP_016 ERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR
40 50 60 70 80 90
200 210 220 230
pF1KE0 VDFSITKRPHTPTPGIYMGRPTY--------------GSSRRRD-YYDRGYDRGYDDRDY
::.::::: :::::::::::::. :..:::: ::::::::::: .
XP_016 VDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYED
100 110 120 130 140 150
240 250 260 270 280
pF1KE0 YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
: .:: :::::::::::: :::::::::::::::
XP_016 Y--DYR------------------YRRRSPSPYYSR--YRSRSRSRSYSPRRY
160 170 180
288 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:39:30 2016 done: Sun Nov 6 23:39:31 2016
Total Scan time: 7.170 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]