Result of FASTA (omim) for
pFN21AE0904
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0904, 357 aa
1>>>pF1KE0904 357 - 357 aa - 357 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9536+/-0.000329; mu= 5.5975+/- 0.020
mean_var=237.1064+/-54.863, 0's: 0 Z-trim(121.1): 29 B-trim: 0 in 0/56
Lambda= 0.083292
statistics sampled from 37087 (37119) to 37087 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.435), width: 16
Scan time: 7.070
The best scores are: opt bits E(85289)
NP_036206 (OMIM: 601672) zinc finger protein DPF3 ( 357) 2461 308.4 1.5e-83
XP_016877162 (OMIM: 601672) PREDICTED: zinc finger ( 347) 2391 300.0 5.2e-81
NP_001267472 (OMIM: 601672) zinc finger protein DP ( 367) 2391 300.0 5.4e-81
XP_016877160 (OMIM: 601672) PREDICTED: zinc finger ( 367) 2391 300.0 5.4e-81
NP_001267473 (OMIM: 601672) zinc finger protein DP ( 412) 2391 300.1 5.8e-81
XP_016877163 (OMIM: 601672) PREDICTED: zinc finger ( 301) 2071 261.5 1.8e-69
NP_001267471 (OMIM: 601672) zinc finger protein DP ( 378) 2030 256.7 6.3e-68
XP_016877159 (OMIM: 601672) PREDICTED: zinc finger ( 378) 2030 256.7 6.3e-68
XP_016877161 (OMIM: 601672) PREDICTED: zinc finger ( 354) 1960 248.2 2e-65
XP_011525658 (OMIM: 601670) PREDICTED: zinc finger ( 407) 1361 176.3 1e-43
XP_005259346 (OMIM: 601670) PREDICTED: zinc finger ( 397) 1357 175.8 1.4e-43
XP_016877164 (OMIM: 601672) PREDICTED: zinc finger ( 249) 1304 169.2 8.7e-42
XP_011525659 (OMIM: 601670) PREDICTED: zinc finger ( 379) 1291 167.9 3.4e-41
XP_005259349 (OMIM: 601670) PREDICTED: zinc finger ( 369) 1289 167.6 3.9e-41
XP_006723471 (OMIM: 601670) PREDICTED: zinc finger ( 396) 1217 159.0 1.7e-38
XP_005259347 (OMIM: 601670) PREDICTED: zinc finger ( 388) 1125 147.9 3.5e-35
XP_006723470 (OMIM: 601670) PREDICTED: zinc finger ( 398) 1125 147.9 3.5e-35
NP_001128627 (OMIM: 601670) zinc finger protein ne ( 414) 1102 145.2 2.5e-34
NP_001276907 (OMIM: 601670) zinc finger protein ne ( 424) 1102 145.2 2.5e-34
NP_004638 (OMIM: 601670) zinc finger protein neuro ( 380) 888 119.4 1.3e-26
NP_001128628 (OMIM: 601670) zinc finger protein ne ( 332) 777 106.0 1.2e-22
XP_011525660 (OMIM: 601670) PREDICTED: zinc finger ( 342) 777 106.0 1.2e-22
XP_016873591 (OMIM: 601671) PREDICTED: zinc finger ( 371) 662 92.3 1.9e-18
NP_006259 (OMIM: 601671) zinc finger protein ubi-d ( 391) 662 92.3 2e-18
NP_001317237 (OMIM: 601671) zinc finger protein ub ( 405) 654 91.4 3.9e-18
XP_016873590 (OMIM: 601671) PREDICTED: zinc finger ( 385) 577 82.1 2.3e-15
XP_006723473 (OMIM: 601670) PREDICTED: zinc finger ( 242) 224 39.4 0.0099
XP_006723472 (OMIM: 601670) PREDICTED: zinc finger ( 242) 224 39.4 0.0099
>>NP_036206 (OMIM: 601672) zinc finger protein DPF3 isof (357 aa)
initn: 2461 init1: 2461 opt: 2461 Z-score: 1620.7 bits: 308.4 E(85289): 1.5e-83
Smith-Waterman score: 2461; 99.4% identity (100.0% similar) in 357 aa overlap (1-357:1-357)
10 20 30 40 50 60
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRAHGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
NP_036 LLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRARGSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 GGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSAHLGGEGRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSAHLGGEGRKE
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 KEAAAAARTTEDLFGSTSESDTSTFRGFDEDDLEEPRSCRGRRSGRGSPTADKKGSC
:::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_036 KEAAAAARTTEDLFGSTSESDTSTFHGFDEDDLEEPRSCRGRRSGRGSPTADKKGSC
310 320 330 340 350
>>XP_016877162 (OMIM: 601672) PREDICTED: zinc finger pro (347 aa)
initn: 2391 init1: 2391 opt: 2391 Z-score: 1575.4 bits: 300.0 E(85289): 5.2e-81
Smith-Waterman score: 2391; 99.4% identity (100.0% similar) in 346 aa overlap (12-357:2-347)
10 20 30 40 50 60
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 LLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRAHGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_016 LLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRARGSA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 GGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPN
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 HRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSAHLGGEGRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSAHLGGEGRKE
240 250 260 270 280 290
310 320 330 340 350
pF1KE0 KEAAAAARTTEDLFGSTSESDTSTFRGFDEDDLEEPRSCRGRRSGRGSPTADKKGSC
:::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 KEAAAAARTTEDLFGSTSESDTSTFHGFDEDDLEEPRSCRGRRSGRGSPTADKKGSC
300 310 320 330 340
>>NP_001267472 (OMIM: 601672) zinc finger protein DPF3 i (367 aa)
initn: 2391 init1: 2391 opt: 2391 Z-score: 1575.1 bits: 300.0 E(85289): 5.4e-81
Smith-Waterman score: 2391; 99.4% identity (100.0% similar) in 346 aa overlap (12-357:22-367)
10 20 30 40 50
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQ
:::::::::::::::::::::::::::::::::::::::
NP_001 MGFTDLEEPISGCPGGPWALGLGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 NNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 FTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 RTRGRAHGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEA
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 QDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE0 AHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFRGFDEDDLEEPRSCRGRRSGRGSPT
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
NP_001 AHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFHGFDEDDLEEPRSCRGRRSGRGSPT
310 320 330 340 350 360
pF1KE0 ADKKGSC
:::::::
NP_001 ADKKGSC
>>XP_016877160 (OMIM: 601672) PREDICTED: zinc finger pro (367 aa)
initn: 2391 init1: 2391 opt: 2391 Z-score: 1575.1 bits: 300.0 E(85289): 5.4e-81
Smith-Waterman score: 2391; 99.4% identity (100.0% similar) in 346 aa overlap (12-357:22-367)
10 20 30 40 50
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQ
:::::::::::::::::::::::::::::::::::::::
XP_016 MGFTDLEEPISGCPGGPWALGLGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 NNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 FTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 RTRGRAHGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEA
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 QDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE0 AHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFRGFDEDDLEEPRSCRGRRSGRGSPT
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_016 AHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFHGFDEDDLEEPRSCRGRRSGRGSPT
310 320 330 340 350 360
pF1KE0 ADKKGSC
:::::::
XP_016 ADKKGSC
>>NP_001267473 (OMIM: 601672) zinc finger protein DPF3 i (412 aa)
initn: 2391 init1: 2391 opt: 2391 Z-score: 1574.5 bits: 300.1 E(85289): 5.8e-81
Smith-Waterman score: 2391; 99.4% identity (100.0% similar) in 346 aa overlap (12-357:67-412)
10 20 30 40
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPF
::::::::::::::::::::::::::::::
NP_001 SFPISSRNHITGLMPPGKLKLENLFHMCTRLGDQFYKEAIEHCRSYNSRLCAERSVRLPF
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE0 LDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPE
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE0 VELPLKKDGFTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VELPLKKDGFTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDL
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE0 EEDIPKRKNRTRGRAHGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTH
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEDIPKRKNRTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTH
220 230 240 250 260 270
230 240 250 260 270 280
pF1KE0 LASEEGDEAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LASEEGDEAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEEL
280 290 300 310 320 330
290 300 310 320 330 340
pF1KE0 VSCADCGRSAHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFRGFDEDDLEEPRSCRG
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_001 VSCADCGRSAHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFHGFDEDDLEEPRSCRG
340 350 360 370 380 390
350
pF1KE0 RRSGRGSPTADKKGSC
::::::::::::::::
NP_001 RRSGRGSPTADKKGSC
400 410
>>XP_016877163 (OMIM: 601672) PREDICTED: zinc finger pro (301 aa)
initn: 2071 init1: 2071 opt: 2071 Z-score: 1368.3 bits: 261.5 E(85289): 1.8e-69
Smith-Waterman score: 2071; 99.3% identity (100.0% similar) in 301 aa overlap (57-357:1-301)
30 40 50 60 70 80
pF1KE0 YNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLH
::::::::::::::::::::::::::::::
XP_016 MEKRHRGPGLAPGQLYTYPARCWRKKRRLH
10 20 30
90 100 110 120 130 140
pF1KE0 PPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVL
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE0 ENDENVEEGNEEEDLEEDIPKRKNRTRGRAHGSAGGRRRHDAASQEDHDKPYVCDICGKR
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_016 ENDENVEEGNEEEDLEEDIPKRKNRTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKR
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE0 YKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCL
160 170 180 190 200 210
270 280 290 300 310 320
pF1KE0 GGSNMNKKSGRPEELVSCADCGRSAHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_016 GGSNMNKKSGRPEELVSCADCGRSAHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFH
220 230 240 250 260 270
330 340 350
pF1KE0 GFDEDDLEEPRSCRGRRSGRGSPTADKKGSC
:::::::::::::::::::::::::::::::
XP_016 GFDEDDLEEPRSCRGRRSGRGSPTADKKGSC
280 290 300
>>NP_001267471 (OMIM: 601672) zinc finger protein DPF3 i (378 aa)
initn: 2097 init1: 2030 opt: 2030 Z-score: 1340.5 bits: 256.7 E(85289): 6.3e-68
Smith-Waterman score: 2030; 99.3% identity (100.0% similar) in 292 aa overlap (1-292:1-292)
10 20 30 40 50 60
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRAHGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
NP_001 LLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRARGSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSAHLGGEGRKE
::::::::::::::::::::::::::::::::::::::::::::::::::.:
NP_001 HRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTL
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 KEAAAAARTTEDLFGSTSESDTSTFRGFDEDDLEEPRSCRGRRSGRGSPTADKKGSC
NP_001 NMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSC
310 320 330 340 350 360
>>XP_016877159 (OMIM: 601672) PREDICTED: zinc finger pro (378 aa)
initn: 2097 init1: 2030 opt: 2030 Z-score: 1340.5 bits: 256.7 E(85289): 6.3e-68
Smith-Waterman score: 2030; 99.3% identity (100.0% similar) in 292 aa overlap (1-292:1-292)
10 20 30 40 50 60
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRAHGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_016 LLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRARGSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSAHLGGEGRKE
::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_016 HRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTL
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 KEAAAAARTTEDLFGSTSESDTSTFRGFDEDDLEEPRSCRGRRSGRGSPTADKKGSC
XP_016 NMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSC
310 320 330 340 350 360
>>XP_016877161 (OMIM: 601672) PREDICTED: zinc finger pro (354 aa)
initn: 2006 init1: 1960 opt: 1960 Z-score: 1295.4 bits: 248.2 E(85289): 2e-65
Smith-Waterman score: 1960; 99.3% identity (100.0% similar) in 281 aa overlap (12-292:22-302)
10 20 30 40 50
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQ
:::::::::::::::::::::::::::::::::::::::
XP_016 MGFTDLEEPISGCPGGPWALGLGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 NNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 FTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGNEEEDLEEDIPKRKN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 RTRGRAHGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEA
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 QDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE0 AHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFRGFDEDDLEEPRSCRGRRSGRGSPT
.:
XP_016 GHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDMERVESRRIQLRSSNI
310 320 330 340 350
>>XP_011525658 (OMIM: 601670) PREDICTED: zinc finger pro (407 aa)
initn: 1210 init1: 662 opt: 1361 Z-score: 905.7 bits: 176.3 E(85289): 1e-43
Smith-Waterman score: 1361; 59.9% identity (78.7% similar) in 362 aa overlap (1-349:28-377)
10 20 30
pF1KE0 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCA
::::: .:: .::..::.::::::::::.::::
XP_011 MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPL-SLGEDFYREAIEHCRSYNARLCA
10 20 30 40 50
40 50 60 70 80 90
pF1KE0 ERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKL
:::.:::::::::::::::::::::: ::::::::::.::::::::::::::. :::.:
XP_011 ERSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRL
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE0 RLLEIKPEVELPLKKDGFTSESTTLEALLRGEGVEKKVDAREEESIQEIQR--VLENDEN
: : : . : ::::.: :. .::::: .: :::.. .:::.:.. :. .:: ..
XP_011 RPCEYKIDCEAPLKKEGGLPEGPVLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHD
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE0 VEEGNEEEDLEEDIPKRKNRTRGRAHGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRP
.: ::::.:::.::::..:.:.: .: :.:.:.:: ::.:::::::::::::::::
XP_011 LE----VEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 GLSYHYAHTHLASEEGDEAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNM
::::::.::::: :::.: . : .. : ::..::.:.:.::::::::.:::::::::
XP_011 GLSYHYTHTHLAEEEGEE--NAERHALPFHRKNNHKPKKAPDGTVIPNGYCDFCLGGS--
240 250 260 270 280 290
280 290 300 310 320
pF1KE0 NKKSGRPEELVSCADCGRSAHLGGEGRKEKEAAAAART---------TEDLFGSTSESDT
::.: ::.:.::::::::.: . . . .::.:: . .: : :::.:
XP_011 -KKTGCPEDLISCADCGRSGH-PSCLQFTVNMTAAVRTYRWQCIECKSCSLCG-TSENDG
300 310 320 330 340
330 340 350
pF1KE0 STFRGFD-EDDLEEPRSC-RGRRSGRGSPTADKKGSC
... :. .:.: .: :: . ::
XP_011 ASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT
350 360 370 380 390 400
357 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 00:29:04 2016 done: Tue Nov 8 00:29:05 2016
Total Scan time: 7.070 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]