Result of FASTA (omim) for
pFN21AE0150
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0150, 315 aa
1>>>pF1KE0150 315 - 315 aa - 315 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7097+/-0.000433; mu= 18.6202+/- 0.027
mean_var=64.7862+/-13.946, 0's: 0 Z-trim(110.2): 265 B-trim: 2500 in 3/51
Lambda= 0.159343
statistics sampled from 18143 (18461) to 18143 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.588), E-opt: 0.2 (0.216), width: 16
Scan time: 7.200
The best scores are: opt bits E(85289)
NP_112581 (OMIM: 610796) ADP/ATP translocase 4 iso ( 315) 2093 490.3 2.2e-138
NP_001305396 (OMIM: 610796) ADP/ATP translocase 4 ( 272) 1680 395.3 7.4e-110
NP_001142 (OMIM: 103220,609283,615418) ADP/ATP tra ( 298) 1456 343.8 2.5e-94
NP_001627 (OMIM: 300151,403000) ADP/ATP translocas ( 298) 1441 340.4 2.8e-93
NP_001143 (OMIM: 300150) ADP/ATP translocase 2 [Ho ( 298) 1426 336.9 3e-92
XP_011530600 (OMIM: 610796) PREDICTED: ADP/ATP tra ( 224) 873 209.7 4.5e-54
NP_001308473 (OMIM: 610823) mitochondrial coenzyme ( 318) 418 105.2 1.8e-22
XP_005259918 (OMIM: 610823) PREDICTED: mitochondri ( 318) 418 105.2 1.8e-22
NP_848621 (OMIM: 610823) mitochondrial coenzyme A ( 318) 418 105.2 1.8e-22
XP_011526239 (OMIM: 610823) PREDICTED: mitochondri ( 318) 418 105.2 1.8e-22
XP_016882159 (OMIM: 610823) PREDICTED: mitochondri ( 382) 418 105.3 2.1e-22
NP_660348 (OMIM: 300641) solute carrier family 25 ( 341) 369 94.0 4.7e-19
NP_001269127 (OMIM: 300242) brain mitochondrial ca ( 290) 343 88.0 2.6e-17
NP_001269125 (OMIM: 300242) brain mitochondrial ca ( 322) 343 88.0 2.8e-17
NP_001269124 (OMIM: 300242) brain mitochondrial ca ( 325) 343 88.0 2.8e-17
XP_011529704 (OMIM: 300242) PREDICTED: brain mitoc ( 334) 343 88.0 2.9e-17
XP_016885425 (OMIM: 300242) PREDICTED: brain mitoc ( 306) 337 86.6 7.1e-17
XP_016885428 (OMIM: 300242) PREDICTED: brain mitoc ( 338) 337 86.6 7.6e-17
XP_016885427 (OMIM: 300242) PREDICTED: brain mitoc ( 341) 337 86.6 7.7e-17
XP_016885426 (OMIM: 300242) PREDICTED: brain mitoc ( 350) 337 86.6 7.8e-17
XP_011535590 (OMIM: 607571) PREDICTED: mitochondri ( 269) 306 79.4 8.9e-15
XP_011535589 (OMIM: 607571) PREDICTED: mitochondri ( 303) 306 79.5 9.8e-15
NP_689920 (OMIM: 139080) graves disease carrier pr ( 332) 305 79.3 1.2e-14
XP_011538513 (OMIM: 139080) PREDICTED: graves dise ( 332) 305 79.3 1.2e-14
XP_016884830 (OMIM: 300641) PREDICTED: solute carr ( 231) 300 78.0 2.1e-14
XP_016884829 (OMIM: 300641) PREDICTED: solute carr ( 258) 300 78.0 2.3e-14
NP_110407 (OMIM: 610815,616839) mitochondrial fola ( 315) 299 77.9 3.1e-14
NP_001190980 (OMIM: 613725) mitochondrial uncoupli ( 300) 297 77.4 4.1e-14
XP_005249540 (OMIM: 613725) PREDICTED: mitochondri ( 310) 297 77.4 4.2e-14
XP_016876013 (OMIM: 610793) PREDICTED: kidney mito ( 291) 285 74.6 2.7e-13
NP_001010875 (OMIM: 610793) kidney mitochondrial c ( 291) 285 74.6 2.7e-13
XP_011535591 (OMIM: 607571) PREDICTED: mitochondri ( 267) 271 71.4 2.4e-12
NP_001098117 (OMIM: 616149) solute carrier family ( 311) 270 71.2 3.1e-12
NP_001273735 (OMIM: 610793) kidney mitochondrial c ( 240) 265 70.0 5.6e-12
XP_005257616 (OMIM: 606521,607196,613710) PREDICTE ( 320) 262 69.4 1.1e-11
XP_006722070 (OMIM: 606521,607196,613710) PREDICTE ( 320) 262 69.4 1.1e-11
XP_005257618 (OMIM: 606521,607196,613710) PREDICTE ( 320) 262 69.4 1.1e-11
NP_068380 (OMIM: 606521,607196,613710) mitochondri ( 320) 262 69.4 1.1e-11
NP_001119593 (OMIM: 606521,607196,613710) mitochon ( 320) 262 69.4 1.1e-11
XP_016880415 (OMIM: 606521,607196,613710) PREDICTE ( 320) 262 69.4 1.1e-11
XP_005257619 (OMIM: 606521,607196,613710) PREDICTE ( 320) 262 69.4 1.1e-11
NP_001119594 (OMIM: 606521,607196,613710) mitochon ( 320) 262 69.4 1.1e-11
XP_005257617 (OMIM: 606521,607196,613710) PREDICTE ( 320) 262 69.4 1.1e-11
XP_005263263 (OMIM: 113730,601665) PREDICTED: mito ( 306) 257 68.2 2.4e-11
NP_060625 (OMIM: 616149) solute carrier family 25 ( 310) 256 68.0 2.9e-11
XP_016882780 (OMIM: 608746) PREDICTED: calcium-bin ( 376) 251 66.9 7.4e-11
XP_016882778 (OMIM: 608746) PREDICTED: calcium-bin ( 423) 251 66.9 8e-11
XP_016882776 (OMIM: 608746) PREDICTED: calcium-bin ( 485) 251 67.0 8.9e-11
XP_011526581 (OMIM: 608746) PREDICTED: calcium-bin ( 532) 251 67.0 9.6e-11
XP_011530530 (OMIM: 113730,601665) PREDICTED: mito ( 277) 245 65.4 1.5e-10
>>NP_112581 (OMIM: 610796) ADP/ATP translocase 4 isoform (315 aa)
initn: 2093 init1: 2093 opt: 2093 Z-score: 2605.5 bits: 490.3 E(85289): 2.2e-138
Smith-Waterman score: 2093; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
250 260 270 280 290 300
310
pF1KE0 YDKIKEFFHIDIGGR
:::::::::::::::
NP_112 YDKIKEFFHIDIGGR
310
>>NP_001305396 (OMIM: 610796) ADP/ATP translocase 4 isof (272 aa)
initn: 1680 init1: 1680 opt: 1680 Z-score: 2093.2 bits: 395.3 E(85289): 7.4e-110
Smith-Waterman score: 1680; 100.0% identity (100.0% similar) in 253 aa overlap (1-253:1-253)
10 20 30 40 50 60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
:::::::::::::
NP_001 YPFDTVRRRMMMQVINFLINYNSKLHLKNLEW
250 260 270
>>NP_001142 (OMIM: 103220,609283,615418) ADP/ATP translo (298 aa)
initn: 1449 init1: 1262 opt: 1456 Z-score: 1814.4 bits: 343.8 E(85289): 2.5e-94
Smith-Waterman score: 1456; 73.7% identity (91.5% similar) in 293 aa overlap (17-307:5-297)
10 20 30 40 50 60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
: :: ::.::::::::::::::::::::::::::: .::::: :
NP_001 MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAE
10 20 30 40
70 80 90 100 110 120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
.:::..::.::::.::::.:::::::::::::::::::::::::::::::..::...::
NP_001 KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
:::.: .:::::::::::::: :::::::::::..:.::: .:.:.::::::.:: :::
NP_001 FWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSD
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
:. ::::::.:::::::.:::.:::.:::.::.:: ::.. ..::..::: ::. .:..:
NP_001 GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVS
170 180 190 200 210 220
250 260 270 280 290
pF1KE0 YPFDTVRRRMMMQSGE--AKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVL
:::::::::::::::. : .: ::.::. :: . :: ..::.::.:::::: :::.::
NP_001 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVL
230 240 250 260 270 280
300 310
pF1KE0 VLYDKIKEFFHIDIGGR
::::.::..
NP_001 VLYDEIKKYV
290
>>NP_001627 (OMIM: 300151,403000) ADP/ATP translocase 3 (298 aa)
initn: 1434 init1: 1252 opt: 1441 Z-score: 1795.8 bits: 340.4 E(85289): 2.8e-93
Smith-Waterman score: 1441; 72.3% identity (92.1% similar) in 292 aa overlap (17-306:5-296)
10 20 30 40 50 60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
: ::.::.::::.:::.:::::::::::::::::: .::::. .
NP_001 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAAD
10 20 30 40
70 80 90 100 110 120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
.:::.:::.::::.::: .:::::::::::::::::::::::::::::.:..::.:. :
NP_001 KQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
:::.: .:::::::::::::: :::::::::::..:.::. ::.:.:::::..::.:::
NP_001 FWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSD
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
:: ::::::.:::::::.:::.:::.:::.::.:: ::.: ..::..:::.::. .:..:
NP_001 GIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVS
170 180 190 200 210 220
250 260 270 280 290
pF1KE0 YPFDTVRRRMMMQSGE--AKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVL
:::::::::::::::. : .: ::.::. ::.. :: ..::.::.:::::: :::.::
NP_001 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVL
230 240 250 260 270 280
300 310
pF1KE0 VLYDKIKEFFHIDIGGR
::::..:.
NP_001 VLYDELKKVI
290
>>NP_001143 (OMIM: 300150) ADP/ATP translocase 2 [Homo s (298 aa)
initn: 1423 init1: 1236 opt: 1426 Z-score: 1777.1 bits: 336.9 E(85289): 3e-92
Smith-Waterman score: 1426; 71.7% identity (90.1% similar) in 293 aa overlap (17-307:5-297)
10 20 30 40 50 60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
: ::.::.::::::::.:::::::::::::::::: .::::. .
NP_001 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITAD
10 20 30 40
70 80 90 100 110 120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
.:::..::.::::.::: .:::::::::::::::::::::::::::::.:..::.:. :
NP_001 KQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
:: .: .:::::::::::::: :::::::::::..:.::. ::.:.:::::..:: :::
NP_001 FWLYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSD
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
:: ::::::.:::::::.:::.::: :::.::.:: ::.: ...:..:::.::. .:. :
NP_001 GIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTS
170 180 190 200 210 220
250 260 270 280 290
pF1KE0 YPFDTVRRRMMMQSGEAKRQ--YKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVL
:::::::::::::::. . : :::::. :: . :: ..::.::.:::::: :::.::
NP_001 YPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVL
230 240 250 260 270 280
300 310
pF1KE0 VLYDKIKEFFHIDIGGR
::::.::..
NP_001 VLYDEIKKYT
290
>>XP_011530600 (OMIM: 610796) PREDICTED: ADP/ATP translo (224 aa)
initn: 856 init1: 781 opt: 873 Z-score: 1091.7 bits: 209.7 E(85289): 4.5e-54
Smith-Waterman score: 1283; 71.1% identity (71.1% similar) in 315 aa overlap (1-315:1-224)
10 20 30 40 50 60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
XP_011 ------------------------------------------------------------
190 200 210 220 230 240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
:::::::::::::::::::::::::::::
XP_011 -------------------------------GLLPKPKKTPFLVSFFIAQVVTTCSGILS
130 140
250 260 270 280 290 300
pF1KE0 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
150 160 170 180 190 200
310
pF1KE0 YDKIKEFFHIDIGGR
:::::::::::::::
XP_011 YDKIKEFFHIDIGGR
210 220
>>NP_001308473 (OMIM: 610823) mitochondrial coenzyme A t (318 aa)
initn: 359 init1: 115 opt: 418 Z-score: 524.4 bits: 105.2 E(85289): 1.8e-22
Smith-Waterman score: 418; 31.3% identity (65.5% similar) in 278 aa overlap (24-291:37-295)
10 20 30 40 50
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQAS
::.:..:.:..::::::..:.:...:: :
NP_001 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMS
::..: . .. : ..::.:.:::: :...: : :..:. ...::... :
NP_001 SKRFSAKEAFR----VLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GVN-KEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDC
. . . . : : .:. ::.:. ..::::..:.:..: :.: .....
NP_001 YYGFRGEALPPW--PRLFAGALAGTTAASLTYPLDLVRARMAVT----PKE-MYSNIFHV
130 140 150 160 170
180 190 200 210 220 230
pF1KE0 IMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPK--PKKTPFLVSFFIAQ
...:.. .:. ::.:: .: :.: : . : .:.:.:.: . .. :. : .
NP_001 FIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYP---FERM
180 190 200 210 220 230
240 250 260 270 280
pF1KE0 VVTTCSGIL----SYPFDTVRRRMMMQ--SGEAKRQYKGTLDCFVKIYQHEG-ISSFFRG
. .:.:.. :::.:.:::::. .: . . :: .:. .:: . ....:
NP_001 IFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR---EEGAVRGLYKG
240 250 260 270 280
290 300 310
pF1KE0 AFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR
: ..:
NP_001 LSMNWVKGPIAVGISFTTFDLMQILLRHLQS
290 300 310
>>XP_005259918 (OMIM: 610823) PREDICTED: mitochondrial c (318 aa)
initn: 359 init1: 115 opt: 418 Z-score: 524.4 bits: 105.2 E(85289): 1.8e-22
Smith-Waterman score: 418; 31.3% identity (65.5% similar) in 278 aa overlap (24-291:37-295)
10 20 30 40 50
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQAS
::.:..:.:..::::::..:.:...:: :
XP_005 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMS
::..: . .. : ..::.:.:::: :...: : :..:. ...::... :
XP_005 SKRFSAKEAFR----VLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GVN-KEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDC
. . . . : : .:. ::.:. ..::::..:.:..: :.: .....
XP_005 YYGFRGEALPPW--PRLFAGALAGTTAASLTYPLDLVRARMAVT----PKE-MYSNIFHV
130 140 150 160 170
180 190 200 210 220 230
pF1KE0 IMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPK--PKKTPFLVSFFIAQ
...:.. .:. ::.:: .: :.: : . : .:.:.:.: . .. :. : .
XP_005 FIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYP---FERM
180 190 200 210 220 230
240 250 260 270 280
pF1KE0 VVTTCSGIL----SYPFDTVRRRMMMQ--SGEAKRQYKGTLDCFVKIYQHEG-ISSFFRG
. .:.:.. :::.:.:::::. .: . . :: .:. .:: . ....:
XP_005 IFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR---EEGAVRGLYKG
240 250 260 270 280
290 300 310
pF1KE0 AFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR
: ..:
XP_005 LSMNWVKGPIAVGISFTTFDLMQILLRHLQS
290 300 310
>>NP_848621 (OMIM: 610823) mitochondrial coenzyme A tran (318 aa)
initn: 359 init1: 115 opt: 418 Z-score: 524.4 bits: 105.2 E(85289): 1.8e-22
Smith-Waterman score: 418; 31.3% identity (65.5% similar) in 278 aa overlap (24-291:37-295)
10 20 30 40 50
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQAS
::.:..:.:..::::::..:.:...:: :
NP_848 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMS
::..: . .. : ..::.:.:::: :...: : :..:. ...::... :
NP_848 SKRFSAKEAFR----VLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GVN-KEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDC
. . . . : : .:. ::.:. ..::::..:.:..: :.: .....
NP_848 YYGFRGEALPPW--PRLFAGALAGTTAASLTYPLDLVRARMAVT----PKE-MYSNIFHV
130 140 150 160 170
180 190 200 210 220 230
pF1KE0 IMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPK--PKKTPFLVSFFIAQ
...:.. .:. ::.:: .: :.: : . : .:.:.:.: . .. :. : .
NP_848 FIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYP---FERM
180 190 200 210 220 230
240 250 260 270 280
pF1KE0 VVTTCSGIL----SYPFDTVRRRMMMQ--SGEAKRQYKGTLDCFVKIYQHEG-ISSFFRG
. .:.:.. :::.:.:::::. .: . . :: .:. .:: . ....:
NP_848 IFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR---EEGAVRGLYKG
240 250 260 270 280
290 300 310
pF1KE0 AFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR
: ..:
NP_848 LSMNWVKGPIAVGISFTTFDLMQILLRHLQS
290 300 310
>>XP_011526239 (OMIM: 610823) PREDICTED: mitochondrial c (318 aa)
initn: 359 init1: 115 opt: 418 Z-score: 524.4 bits: 105.2 E(85289): 1.8e-22
Smith-Waterman score: 418; 31.3% identity (65.5% similar) in 278 aa overlap (24-291:37-295)
10 20 30 40 50
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQAS
::.:..:.:..::::::..:.:...:: :
XP_011 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMS
::..: . .. : ..::.:.:::: :...: : :..:. ...::... :
XP_011 SKRFSAKEAFR----VLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GVN-KEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDC
. . . . : : .:. ::.:. ..::::..:.:..: :.: .....
XP_011 YYGFRGEALPPW--PRLFAGALAGTTAASLTYPLDLVRARMAVT----PKE-MYSNIFHV
130 140 150 160 170
180 190 200 210 220 230
pF1KE0 IMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPK--PKKTPFLVSFFIAQ
...:.. .:. ::.:: .: :.: : . : .:.:.:.: . .. :. : .
XP_011 FIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYP---FERM
180 190 200 210 220 230
240 250 260 270 280
pF1KE0 VVTTCSGIL----SYPFDTVRRRMMMQ--SGEAKRQYKGTLDCFVKIYQHEG-ISSFFRG
. .:.:.. :::.:.:::::. .: . . :: .:. .:: . ....:
XP_011 IFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR---EEGAVRGLYKG
240 250 260 270 280
290 300 310
pF1KE0 AFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR
: ..:
XP_011 LSMNWVKGPIAVGISFTTFDLMQILLRHLQS
290 300 310
315 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:11:35 2016 done: Fri Nov 4 00:11:37 2016
Total Scan time: 7.200 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]