FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0089, 708 aa
  1>>>pF1KE0089 708 - 708 aa - 708 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5079+/-0.00087; mu= 19.6498+/- 0.053
 mean_var=78.6918+/-15.489, 0's: 0 Z-trim(107.6): 26  B-trim: 43 in 1/50
 Lambda= 0.144580
 statistics sampled from 9638 (9661) to 9638 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.297), width:  16
 Scan time:  2.500

The best scores are:                                      opt bits E(32554)
CCDS7642.1 ZRANB1 gene_id:54764|Hs108|chr10        ( 708) 4887 1029.2       0


>>CCDS7642.1 ZRANB1 gene_id:54764|Hs108|chr10             (708 aa)
 initn: 4887 init1: 4887 opt: 4887  Z-score: 5505.6  bits: 1029.2 E(32554):    0
Smith-Waterman score: 4887; 100.0% identity (100.0% similar) in 708 aa overlap (1-708:1-708)

               10        20        30        40        50        60
pF1KE0 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE0 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV
              610       620       630       640       650       660

              670       680       690       700        
pF1KE0 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE
              670       680       690       700        




708 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 15:18:39 2016 done: Sun Nov  6 15:18:39 2016
 Total Scan time:  2.500 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]