Result of FASTA (ccds) for
pFN21AB9999
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9999, 1332 aa
1>>>pF1KB9999 1332 - 1332 aa - 1332 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3825+/-0.00115; mu= 0.5421+/- 0.070
mean_var=257.6203+/-50.983, 0's: 0 Z-trim(110.9): 5 B-trim: 7 in 1/51
Lambda= 0.079907
statistics sampled from 11943 (11945) to 11943 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.691), E-opt: 0.2 (0.367), width: 16
Scan time: 4.370
The best scores are: opt bits E(32554)
CCDS42238.1 MYBBP1A gene_id:10514|Hs108|chr17 (1332) 8692 1016.4 0
CCDS11046.1 MYBBP1A gene_id:10514|Hs108|chr17 (1328) 8630 1009.2 0
>>CCDS42238.1 MYBBP1A gene_id:10514|Hs108|chr17 (1332 aa)
initn: 8692 init1: 8692 opt: 8692 Z-score: 5426.3 bits: 1016.4 E(32554): 0
Smith-Waterman score: 8692; 100.0% identity (100.0% similar) in 1332 aa overlap (1-1332:1-1332)
10 20 30 40 50 60
pF1KB9 MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LRGRPKGSEMKYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LRGRPKGSEMKYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LHQVKKAMLRPALFANLFGVLALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LHQVKKAMLRPALFANLFGVLALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LVDILSEVSKATLQEILPEVLKADLNIILSSPEQLELFLLAQQKVPSKLKKLVGSVNLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LVDILSEVSKATLQEILPEVLKADLNIILSSPEQLELFLLAQQKVPSKLKKLVGSVNLFS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDKFPRFWKEVVEQGLLKMQFWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDKFPRFWKEVVEQGLLKMQFWP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAPEMDDYVGTFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAPEMDDYVGTFL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 EGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 FHSFFVTKKPTSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FHSFFVTKKPTSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 WTYHLVQFADLLLNHSHNVTTVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 WTYHLVQFADLLLNHSHNVTTVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 LVGIHLLKSPAESCDLLGDIQTCIRKSLGEKPRRSRTKTIDPQEPPWVEVLVEILLALLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LVGIHLLKSPAESCDLLGDIQTCIRKSLGEKPRRSRTKTIDPQEPPWVEVLVEILLALLA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 QPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB9 DKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENEEE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB9 LGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB9 ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGAL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB9 HAQVERLVQQAGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HAQVERLVQQAGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB9 TGPQAASCLDLNLVTRVYSTALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TGPQAASCLDLNLVTRVYSTALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHI
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB9 TGPVRPRHQACLLLQKTLSMREVRSCFEDPEWKQLMGQVLAKVTENLRVLGEAQTKAQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TGPVRPRHQACLLLQKTLSMREVRSCFEDPEWKQLMGQVLAKVTENLRVLGEAQTKAQHQ
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB9 QALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQQGAHSTGSSRLHDLYWQAMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQQGAHSTGSSRLHDLYWQAMK
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB9 TLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGTPAEDGTPAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGTPAEDGTPAAT
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB9 GGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB9 VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKA
1270 1280 1290 1300 1310 1320
1330
pF1KB9 QTLRFTISSSKK
::::::::::::
CCDS42 QTLRFTISSSKK
1330
>>CCDS11046.1 MYBBP1A gene_id:10514|Hs108|chr17 (1328 aa)
initn: 8630 init1: 8630 opt: 8630 Z-score: 5387.7 bits: 1009.2 E(32554): 0
Smith-Waterman score: 8630; 100.0% identity (100.0% similar) in 1321 aa overlap (1-1321:1-1321)
10 20 30 40 50 60
pF1KB9 MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LRGRPKGSEMKYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LRGRPKGSEMKYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LHQVKKAMLRPALFANLFGVLALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LHQVKKAMLRPALFANLFGVLALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LVDILSEVSKATLQEILPEVLKADLNIILSSPEQLELFLLAQQKVPSKLKKLVGSVNLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LVDILSEVSKATLQEILPEVLKADLNIILSSPEQLELFLLAQQKVPSKLKKLVGSVNLFS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDKFPRFWKEVVEQGLLKMQFWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDKFPRFWKEVVEQGLLKMQFWP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAPEMDDYVGTFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAPEMDDYVGTFL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 EGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 FHSFFVTKKPTSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FHSFFVTKKPTSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 WTYHLVQFADLLLNHSHNVTTVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 WTYHLVQFADLLLNHSHNVTTVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 LVGIHLLKSPAESCDLLGDIQTCIRKSLGEKPRRSRTKTIDPQEPPWVEVLVEILLALLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LVGIHLLKSPAESCDLLGDIQTCIRKSLGEKPRRSRTKTIDPQEPPWVEVLVEILLALLA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 QPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB9 DKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENEEE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB9 LGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB9 ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGAL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB9 HAQVERLVQQAGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HAQVERLVQQAGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB9 TGPQAASCLDLNLVTRVYSTALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TGPQAASCLDLNLVTRVYSTALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHI
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB9 TGPVRPRHQACLLLQKTLSMREVRSCFEDPEWKQLMGQVLAKVTENLRVLGEAQTKAQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TGPVRPRHQACLLLQKTLSMREVRSCFEDPEWKQLMGQVLAKVTENLRVLGEAQTKAQHQ
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB9 QALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQQGAHSTGSSRLHDLYWQAMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQQGAHSTGSSRLHDLYWQAMK
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB9 TLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGTPAEDGTPAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGTPAEDGTPAAT
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB9 GGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB9 VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKA
1270 1280 1290 1300 1310 1320
1330
pF1KB9 QTLRFTISSSKK
:
CCDS11 QVRKAGKP
1332 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:59:29 2016 done: Sun Nov 6 13:59:30 2016
Total Scan time: 4.370 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]