Result of FASTA (omim) for
pFN21AB9966
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9966, 695 aa
1>>>pF1KB9966 695 - 695 aa - 695 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4447+/-0.000666; mu= 14.9671+/- 0.041
mean_var=263.2976+/-69.014, 0's: 0 Z-trim(108.2): 319 B-trim: 955 in 1/52
Lambda= 0.079041
statistics sampled from 15830 (16266) to 15830 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.506), E-opt: 0.2 (0.191), width: 16
Scan time: 10.940
The best scores are: opt bits E(85289)
NP_000136 (OMIM: 136435,233300,276400,608115) foll ( 695) 4582 538.1 4.3e-152
NP_852111 (OMIM: 136435,233300,276400,608115) foll ( 669) 3540 419.2 2.5e-116
XP_011531036 (OMIM: 136435,233300,276400,608115) P ( 618) 3123 371.6 4.9e-102
XP_011531035 (OMIM: 136435,233300,276400,608115) P ( 729) 3123 371.7 5.4e-102
XP_011531038 (OMIM: 136435,233300,276400,608115) P ( 431) 2870 342.5 2e-93
XP_011531037 (OMIM: 136435,233300,276400,608115) P ( 431) 2870 342.5 2e-93
NP_000224 (OMIM: 152790,176410,238320) lutropin-ch ( 699) 2284 276.0 3.3e-73
XP_011531130 (OMIM: 152790,176410,238320) PREDICTE ( 674) 2183 264.5 9.5e-70
XP_011531133 (OMIM: 152790,176410,238320) PREDICTE ( 487) 1855 226.9 1.5e-58
XP_016859579 (OMIM: 152790,176410,238320) PREDICTE ( 487) 1855 226.9 1.5e-58
XP_016859578 (OMIM: 152790,176410,238320) PREDICTE ( 614) 1598 197.7 1.1e-49
XP_005264366 (OMIM: 152790,176410,238320) PREDICTE ( 380) 1581 195.4 3.3e-49
XP_011531136 (OMIM: 152790,176410,238320) PREDICTE ( 380) 1581 195.4 3.3e-49
XP_006712078 (OMIM: 152790,176410,238320) PREDICTE ( 389) 1581 195.5 3.3e-49
XP_011535421 (OMIM: 275200,603372,603373,609152) P ( 671) 1561 193.6 2.1e-48
XP_005268094 (OMIM: 275200,603372,603373,609152) P ( 764) 1561 193.7 2.3e-48
NP_000360 (OMIM: 275200,603372,603373,609152) thyr ( 764) 1561 193.7 2.3e-48
XP_011531042 (OMIM: 136435,233300,276400,608115) P ( 319) 1476 183.3 1.2e-45
NP_001333361 (OMIM: 606666,615311) leucine-rich re ( 927) 652 90.1 4e-17
NP_060960 (OMIM: 606666,615311) leucine-rich repea ( 951) 652 90.2 4.1e-17
NP_001264155 (OMIM: 606667) leucine-rich repeat-co ( 883) 577 81.6 1.5e-14
NP_001264156 (OMIM: 606667) leucine-rich repeat-co ( 835) 576 81.4 1.6e-14
NP_003658 (OMIM: 606667) leucine-rich repeat-conta ( 907) 576 81.5 1.6e-14
XP_011508141 (OMIM: 606653) PREDICTED: leucine-ric ( 900) 563 80.0 4.5e-14
XP_011508146 (OMIM: 606653) PREDICTED: leucine-ric ( 708) 552 78.5 9.5e-14
XP_011508148 (OMIM: 606653) PREDICTED: leucine-ric ( 777) 552 78.6 1e-13
XP_011508144 (OMIM: 606653) PREDICTED: leucine-ric ( 777) 552 78.6 1e-13
XP_011508145 (OMIM: 606653) PREDICTED: leucine-ric ( 777) 552 78.6 1e-13
NP_001017404 (OMIM: 606653) leucine-rich repeat-co ( 828) 552 78.7 1e-13
XP_016857486 (OMIM: 606653) PREDICTED: leucine-ric ( 833) 552 78.7 1e-13
XP_011508143 (OMIM: 606653) PREDICTED: leucine-ric ( 833) 552 78.7 1e-13
XP_011508142 (OMIM: 606653) PREDICTED: leucine-ric ( 852) 552 78.7 1e-13
XP_011508140 (OMIM: 606653) PREDICTED: leucine-ric ( 900) 552 78.7 1.1e-13
NP_067649 (OMIM: 606653) leucine-rich repeat-conta ( 915) 552 78.7 1.1e-13
XP_005245461 (OMIM: 606653) PREDICTED: leucine-ric ( 924) 552 78.7 1.1e-13
NP_001017403 (OMIM: 606653) leucine-rich repeat-co ( 967) 552 78.8 1.1e-13
XP_016857487 (OMIM: 606653) PREDICTED: leucine-ric ( 609) 549 78.1 1.1e-13
XP_016857485 (OMIM: 606653) PREDICTED: leucine-ric ( 876) 550 78.5 1.2e-13
NP_001018046 (OMIM: 275200,603372,603373,609152) t ( 253) 436 64.6 5.4e-10
XP_005268096 (OMIM: 275200,603372,603373,609152) P ( 253) 436 64.6 5.4e-10
XP_006720308 (OMIM: 275200,603372,603373,609152) P ( 274) 436 64.6 5.6e-10
NP_001136098 (OMIM: 275200,603372,603373,609152) t ( 274) 436 64.6 5.6e-10
NP_001159530 (OMIM: 219050,606655) relaxin recepto ( 730) 365 57.2 2.5e-07
NP_570718 (OMIM: 219050,606655) relaxin receptor 2 ( 754) 365 57.3 2.6e-07
NP_001240659 (OMIM: 606654) relaxin receptor 1 iso ( 626) 363 56.9 2.7e-07
XP_016864011 (OMIM: 606654) PREDICTED: relaxin rec ( 675) 363 57.0 2.9e-07
XP_016864007 (OMIM: 606654) PREDICTED: relaxin rec ( 756) 363 57.0 3e-07
XP_016864006 (OMIM: 606654) PREDICTED: relaxin rec ( 759) 363 57.0 3e-07
XP_011530476 (OMIM: 606654) PREDICTED: relaxin rec ( 783) 363 57.1 3.1e-07
NP_001240662 (OMIM: 606654) relaxin receptor 1 iso ( 601) 357 56.2 4.3e-07
>>NP_000136 (OMIM: 136435,233300,276400,608115) follicle (695 aa)
initn: 4582 init1: 4582 opt: 4582 Z-score: 2851.5 bits: 538.1 E(85289): 4.3e-152
Smith-Waterman score: 4582; 99.7% identity (100.0% similar) in 695 aa overlap (1-695:1-695)
10 20 30 40 50 60
pF1KB9 MALLLVSLLAFLSLGSGCHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MALLLVSLLAFLSLGSGCHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILRQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILRQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VDYMTQTRGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIM
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VDYMTQARGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 GYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 VDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQLDCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQLDCK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 VQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 AFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISASLKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISASLKVP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 LITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSS
610 620 630 640 650 660
670 680 690
pF1KB9 TVHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
:::::::::::::::::::.:::::::::::::::
NP_000 TVHNTHPRNGHCSSAPRVTSGSTYILVPLSHLAQN
670 680 690
>>NP_852111 (OMIM: 136435,233300,276400,608115) follicle (669 aa)
initn: 3473 init1: 3473 opt: 3540 Z-score: 2209.5 bits: 419.2 E(85289): 2.5e-116
Smith-Waterman score: 4358; 96.0% identity (96.3% similar) in 695 aa overlap (1-695:1-669)
10 20 30 40 50 60
pF1KB9 MALLLVSLLAFLSLGSGCHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MALLLVSLLAFLSLGSGCHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN
::::::::::::::::::::::::::::: :::::
NP_852 NLQYLLISNTGIKHLPDVHKIHSLQKVLL--------------------------WLNKN
130 140 150
190 200 210 220 230 240
pF1KB9 GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB9 LKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILRQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 LKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILRQE
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB9 VDYMTQTRGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIM
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 VDYMTQARGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIM
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB9 GYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 GYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIAS
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB9 VDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQLDCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 VDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQLDCK
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB9 VQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 VQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVL
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB9 AFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISASLKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 AFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISASLKVP
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB9 LITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 LITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSS
580 590 600 610 620 630
670 680 690
pF1KB9 TVHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
:::::::::::::::::::.:::::::::::::::
NP_852 TVHNTHPRNGHCSSAPRVTSGSTYILVPLSHLAQN
640 650 660
>>XP_011531036 (OMIM: 136435,233300,276400,608115) PREDI (618 aa)
initn: 3161 init1: 3123 opt: 3123 Z-score: 1952.8 bits: 371.6 E(85289): 4.9e-102
Smith-Waterman score: 3690; 94.0% identity (94.4% similar) in 604 aa overlap (126-695:15-618)
100 110 120 130 140 150
pF1KB9 KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI
::::::::::::::::::::::::::::::
XP_011 MIIIAYLKMRIGNRLISNTGIKHLPDVHKIHSLQKVLLDIQDNI
10 20 30 40
160 170 180 190 200 210
pF1KB9 NIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFH
50 60 70 80 90 100
220 230 240
pF1KB9 GASGPVIL----------------------------------DISRTRIHSLPSYGLENL
:::::::: ::::::::::::::::::
XP_011 GASGPVILNRRTRTPTEPNVLLAKYPSGQGVLEEPESLSSSIDISRTRIHSLPSYGLENL
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB9 KKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILRQEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILRQEV
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB9 DYMTQTRGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIMG
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DYMTQARGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIMG
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB9 YNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIASV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIASV
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB9 DIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQLDCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQLDCKV
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB9 QLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVLA
410 420 430 440 450 460
550 560 570 580 590 600
pF1KB9 FVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISASLKVPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISASLKVPL
470 480 490 500 510 520
610 620 630 640 650 660
pF1KB9 ITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSST
530 540 550 560 570 580
670 680 690
pF1KB9 VHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
::::::::::::::::::.:::::::::::::::
XP_011 VHNTHPRNGHCSSAPRVTSGSTYILVPLSHLAQN
590 600 610
>>XP_011531035 (OMIM: 136435,233300,276400,608115) PREDI (729 aa)
initn: 3190 init1: 3123 opt: 3123 Z-score: 1952.2 bits: 371.7 E(85289): 5.4e-102
Smith-Waterman score: 4492; 95.0% identity (95.3% similar) in 727 aa overlap (3-695:3-729)
10 20 30 40 50 60
pF1KB9 MALLLVSLLAFLSLGSGCHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALLLVSLLAFLSLGSGCHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN
130 140 150 160 170 180
190 200 210 220
pF1KB9 GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVIL-----------------
:::::::::::::::::::::::::::::::::::::::::::
XP_011 GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILNRRTRTPTEPNVLLAKY
190 200 210 220 230 240
230 240 250 260
pF1KB9 -----------------DISRTRIHSLPSYGLENLKKLRARSTYNLKKLPTLEKLVALME
:::::::::::::::::::::::::::::::::::::::::::
XP_011 PSGQGVLEEPESLSSSIDISRTRIHSLPSYGLENLKKLRARSTYNLKKLPTLEKLVALME
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB9 ASLTYPSHCCAFANWRRQISELHPICNKSILRQEVDYMTQTRGQRSSLAEDNESSYSRGF
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
XP_011 ASLTYPSHCCAFANWRRQISELHPICNKSILRQEVDYMTQARGQRSSLAEDNESSYSRGF
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB9 DMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIMGYNILRVLIWFISILAITGNIIVLVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIMGYNILRVLIWFISILAITGNIIVLVI
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB9 LTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIASVDIHTKSQYHNYAIDWQTGAGCDAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIASVDIHTKSQYHNYAIDWQTGAGCDAAG
430 440 450 460 470 480
450 460 470 480 490 500
pF1KB9 FFTVFASELSVYTLTAITLERWHTITHAMQLDCKVQLRHAASVMVMGWIFAFAAALFPIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFTVFASELSVYTLTAITLERWHTITHAMQLDCKVQLRHAASVMVMGWIFAFAAALFPIF
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB9 GISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVLAFVVICGCYIHIYLTVRNPNIVSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVLAFVVICGCYIHIYLTVRNPNIVSSSS
550 560 570 580 590 600
570 580 590 600 610 620
pF1KB9 DTRIAKRMAMLIFTDFLCMAPISFFAISASLKVPLITVSKAKILLVLFHPINSCANPFLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DTRIAKRMAMLIFTDFLCMAPISFFAISASLKVPLITVSKAKILLVLFHPINSCANPFLY
610 620 630 640 650 660
630 640 650 660 670 680
pF1KB9 AIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSSTVHNTHPRNGHCSSAPRVTNGSTYIL
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
XP_011 AIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSSTVHNTHPRNGHCSSAPRVTSGSTYIL
670 680 690 700 710 720
690
pF1KB9 VPLSHLAQN
:::::::::
XP_011 VPLSHLAQN
>>XP_011531038 (OMIM: 136435,233300,276400,608115) PREDI (431 aa)
initn: 2870 init1: 2870 opt: 2870 Z-score: 1798.3 bits: 342.5 E(85289): 2e-93
Smith-Waterman score: 2870; 99.5% identity (100.0% similar) in 431 aa overlap (265-695:1-431)
240 250 260 270 280 290
pF1KB9 SYGLENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNK
::::::::::::::::::::::::::::::
XP_011 MEASLTYPSHCCAFANWRRQISELHPICNK
10 20 30
300 310 320 330 340 350
pF1KB9 SILRQEVDYMTQTRGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFN
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SILRQEVDYMTQARGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFN
40 50 60 70 80 90
360 370 380 390 400 410
pF1KB9 PCEDIMGYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PCEDIMGYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIY
100 110 120 130 140 150
420 430 440 450 460 470
pF1KB9 LLLIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLLIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHA
160 170 180 190 200 210
480 490 500 510 520 530
pF1KB9 MQLDCKVQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQLDCKVQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSL
220 230 240 250 260 270
540 550 560 570 580 590
pF1KB9 LVLNVLAFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVLNVLAFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAIS
280 290 300 310 320 330
600 610 620 630 640 650
pF1KB9 ASLKVPLITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASLKVPLITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIY
340 350 360 370 380 390
660 670 680 690
pF1KB9 RTETSSTVHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
:::::::::::::::::::::::::.:::::::::::::::
XP_011 RTETSSTVHNTHPRNGHCSSAPRVTSGSTYILVPLSHLAQN
400 410 420 430
>>XP_011531037 (OMIM: 136435,233300,276400,608115) PREDI (431 aa)
initn: 2870 init1: 2870 opt: 2870 Z-score: 1798.3 bits: 342.5 E(85289): 2e-93
Smith-Waterman score: 2870; 99.5% identity (100.0% similar) in 431 aa overlap (265-695:1-431)
240 250 260 270 280 290
pF1KB9 SYGLENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNK
::::::::::::::::::::::::::::::
XP_011 MEASLTYPSHCCAFANWRRQISELHPICNK
10 20 30
300 310 320 330 340 350
pF1KB9 SILRQEVDYMTQTRGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFN
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SILRQEVDYMTQARGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFN
40 50 60 70 80 90
360 370 380 390 400 410
pF1KB9 PCEDIMGYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PCEDIMGYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIY
100 110 120 130 140 150
420 430 440 450 460 470
pF1KB9 LLLIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLLIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHA
160 170 180 190 200 210
480 490 500 510 520 530
pF1KB9 MQLDCKVQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQLDCKVQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSL
220 230 240 250 260 270
540 550 560 570 580 590
pF1KB9 LVLNVLAFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVLNVLAFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAIS
280 290 300 310 320 330
600 610 620 630 640 650
pF1KB9 ASLKVPLITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASLKVPLITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIY
340 350 360 370 380 390
660 670 680 690
pF1KB9 RTETSSTVHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
:::::::::::::::::::::::::.:::::::::::::::
XP_011 RTETSSTVHNTHPRNGHCSSAPRVTSGSTYILVPLSHLAQN
400 410 420 430
>>NP_000224 (OMIM: 152790,176410,238320) lutropin-chorio (699 aa)
initn: 2331 init1: 1538 opt: 2284 Z-score: 1435.3 bits: 276.0 E(85289): 3.3e-73
Smith-Waterman score: 2290; 53.0% identity (79.7% similar) in 681 aa overlap (2-674:7-670)
10 20 30 40 50
pF1KB9 MALLLVSLLAFLS--LGSGCHHRICH--CSNRVFLCQESKVTEIPSDLPRNAI-E
:: :..:: .:. : . .. .: :. : . . . :. : .. .
NP_000 MKQRFSALQLLKLLLLLQPPLPRALREALCPEPCN-----CVPDGALRCPG--PTAGLTR
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 LRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLY
: .. ..:: . :: :.... :::::: : :: :::..:.:: .: :: :....:: :
NP_000 LSLAYLPVKVIPSQAFRGLNEVIKIEISQIDSLERIEANAFDNLLNLSEILIQNTKNLRY
60 70 80 90 100 110
120 130 140 150 160
pF1KB9 INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQK-VLLDIQDNINIHTIERNSFVGLS
:.: :: ::: :.:: : ::::...::: :. : .. .:.: ::..: :: :.: :..
NP_000 IEPGAFINLPRLKYLSICNTGIRKFPDVTKVFSSESNFILEICDNLHITTIPGNAFQGMN
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 FESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR
::: : : ::..:... ::::: : :.:..: .::.. : .:.::.:: :::: :.
NP_000 NESVTLKLYGNGFEEVQSHAFNGTTLTSLELKENVHLEKMHNGAFRGATGPKTLDISSTK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 IHSLPSYGLENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELH
...:::::::....: : :.:.:::::. : .: :.::.:::::::::: : . ...
NP_000 LQALPSYGLESIQRLIATSSYSLKKLPSRETFVNLLEATLTYPSHCCAFRNLPTKEQNFS
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB9 PICNKSILRQEVDYMTQTRGQR--SSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCS
.... .: . . .. .. ::. ..: : :.: ..: .: . :.
NP_000 HSISENFSKQCESTVRKVNNKTLYSSMLAESELS---GWD-----YEYGFCLPKTP-RCA
300 310 320 330 340
350 360 370 380 390 400
pF1KB9 PKPDAFNPCEDIMGYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFA
:.:::::::::::::..::::::.:.:::: ::. :: .: ::.:::::::::::::.::
NP_000 PEPDAFNPCEDIMGYDFLRVLIWLINILAIMGNMTVLFVLLTSRYKLTVPRFLMCNLSFA
350 360 370 380 390 400
410 420 430 440 450 460
pF1KB9 DLCIGIYLLLIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLER
:.:.:.::::::::: .::.::.:.:::::::.::..:::::::::::::::::.:::::
NP_000 DFCMGLYLLLIASVDSQTKGQYYNHAIDWQTGSGCSTAGFFTVFASELSVYTLTVITLER
410 420 430 440 450 460
470 480 490 500 510 520
pF1KB9 WHTITHAMQLDCKVQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLS
:::::.:..:: :..:::: .:. ::.:. :..:. :.:.:::::::.:::... ::
NP_000 WHTITYAIHLDQKLRLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVETTLS
470 480 490 500 510 520
530 540 550 560 570 580
pF1KB9 QLYVMSLLVLNVLAFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAP
:.:....:.:::.:: .::.:::.::..::::.......::.:::.::.:::::: ::::
NP_000 QVYILTILILNVVAFFIICACYIKIYFAVRNPELMATNKDTKIAKKMAILIFTDFTCMAP
530 540 550 560 570 580
590 600 610 620 630 640
pF1KB9 ISFFAISASLKVPLITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCY
::::::::..:::::::...:.:::::.::::::::::::::::.:.::::.:::: ::
NP_000 ISFFAISAAFKVPLITVTNSKVLLVLFYPINSCANPFLYAIFTKTFQRDFFLLLSKFGCC
590 600 610 620 630 640
650 660 670 680 690
pF1KB9 EMQAQIYRTETSSTVHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
. .:..:: . :. .... .:: .:
NP_000 KRRAELYRRKDFSA-YTSNCKNGFTGSNKPSQSTLKLSTLHCQGTALLDKTRYTEC
650 660 670 680 690
>>XP_011531130 (OMIM: 152790,176410,238320) PREDICTED: l (674 aa)
initn: 2234 init1: 1538 opt: 2183 Z-score: 1373.2 bits: 264.5 E(85289): 9.5e-70
Smith-Waterman score: 2186; 55.5% identity (82.7% similar) in 595 aa overlap (83-674:61-645)
60 70 80 90 100 110
pF1KB9 FVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYIN
..:: ...: .: .. .: :....:: ::.
XP_011 PEPCNCVPDGALRCPGPTAGLTRLSLAYLPVKVIPSQAFRGLNEVIKILIQNTKNLRYIE
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB9 PEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQK-VLLDIQDNINIHTIERNSFVGLSFE
: :: ::: :.:: : ::::...::: :. : .. .:.: ::..: :: :.: :.. :
XP_011 PGAFINLPRLKYLSICNTGIRKFPDVTKVFSSESNFILEICDNLHITTIPGNAFQGMNNE
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 SVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH
:: : : ::..:... ::::: : :.:..: .::.. : .:.::.:: :::: :...
XP_011 SVTLKLYGNGFEEVQSHAFNGTTLTSLELKENVHLEKMHNGAFRGATGPKTLDISSTKLQ
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB9 SLPSYGLENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPI
.:::::::....: : :.:.:::::. : .: :.::.:::::::::: : . ...
XP_011 ALPSYGLESIQRLIATSSYSLKKLPSRETFVNLLEATLTYPSHCCAFRNLPTKEQNFSHS
220 230 240 250 260 270
300 310 320 330 340
pF1KB9 CNKSILRQEVDYMTQTRGQR--SSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPK
.... .: . . .. .. ::. ..: : :.: ..: .: . :.:.
XP_011 ISENFSKQCESTVRKVNNKTLYSSMLAESELS---GWD-----YEYGFCLPKTP-RCAPE
280 290 300 310 320
350 360 370 380 390 400
pF1KB9 PDAFNPCEDIMGYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADL
:::::::::::::..::::::.:.:::: ::. :: .: ::.:::::::::::::.:::.
XP_011 PDAFNPCEDIMGYDFLRVLIWLINILAIMGNMTVLFVLLTSRYKLTVPRFLMCNLSFADF
330 340 350 360 370 380
410 420 430 440 450 460
pF1KB9 CIGIYLLLIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWH
:.:.::::::::: .::.::.:.:::::::.::..:::::::::::::::::.:::::::
XP_011 CMGLYLLLIASVDSQTKGQYYNHAIDWQTGSGCSTAGFFTVFASELSVYTLTVITLERWH
390 400 410 420 430 440
470 480 490 500 510 520
pF1KB9 TITHAMQLDCKVQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQL
:::.:..:: :..:::: .:. ::.:. :..:. :.:.:::::::.:::... :::.
XP_011 TITYAIHLDQKLRLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVETTLSQV
450 460 470 480 490 500
530 540 550 560 570 580
pF1KB9 YVMSLLVLNVLAFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPIS
:....:.:::.:: .::.:::.::..::::.......::.:::.::.:::::: ::::::
XP_011 YILTILILNVVAFFIICACYIKIYFAVRNPELMATNKDTKIAKKMAILIFTDFTCMAPIS
510 520 530 540 550 560
590 600 610 620 630 640
pF1KB9 FFAISASLKVPLITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEM
::::::..:::::::...:.:::::.::::::::::::::::.:.::::.:::: :: .
XP_011 FFAISAAFKVPLITVTNSKVLLVLFYPINSCANPFLYAIFTKTFQRDFFLLLSKFGCCKR
570 580 590 600 610 620
650 660 670 680 690
pF1KB9 QAQIYRTETSSTVHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
.:..:: . :. .... .:: .:
XP_011 RAELYRRKDFSA-YTSNCKNGFTGSNKPSQSTLKLSTLHCQGTALLDKTRYTEC
630 640 650 660 670
>>XP_011531133 (OMIM: 152790,176410,238320) PREDICTED: l (487 aa)
initn: 1827 init1: 1538 opt: 1855 Z-score: 1172.3 bits: 226.9 E(85289): 1.5e-58
Smith-Waterman score: 1858; 58.1% identity (84.6% similar) in 468 aa overlap (209-674:1-458)
180 190 200 210 220 230
pF1KB9 KNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL
. : .:.::.:: :::: :....::::::
XP_011 MHNGAFRGATGPKTLDISSTKLQALPSYGL
10 20 30
240 250 260 270 280 290
pF1KB9 ENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILR
:....: : :.:.:::::. : .: :.::.:::::::::: : . ... .... .
XP_011 ESIQRLIATSSYSLKKLPSRETFVNLLEATLTYPSHCCAFRNLPTKEQNFSHSISENFSK
40 50 60 70 80 90
300 310 320 330 340 350
pF1KB9 QEVDYMTQTRGQR--SSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPC
: . . .. .. ::. ..: : :.: ..: .: . :.:.:::::::
XP_011 QCESTVRKVNNKTLYSSMLAESELS---GWD-----YEYGFCLPKTP-RCAPEPDAFNPC
100 110 120 130 140
360 370 380 390 400 410
pF1KB9 EDIMGYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLL
::::::..::::::.:.:::: ::. :: .: ::.:::::::::::::.:::.:.:.:::
XP_011 EDIMGYDFLRVLIWLINILAIMGNMTVLFVLLTSRYKLTVPRFLMCNLSFADFCMGLYLL
150 160 170 180 190 200
420 430 440 450 460 470
pF1KB9 LIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQ
:::::: .::.::.:.:::::::.::..:::::::::::::::::.::::::::::.:..
XP_011 LIASVDSQTKGQYYNHAIDWQTGSGCSTAGFFTVFASELSVYTLTVITLERWHTITYAIH
210 220 230 240 250 260
480 490 500 510 520 530
pF1KB9 LDCKVQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLV
:: :..:::: .:. ::.:. :..:. :.:.:::::::.:::... :::.:....:.
XP_011 LDQKLRLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVETTLSQVYILTILI
270 280 290 300 310 320
540 550 560 570 580 590
pF1KB9 LNVLAFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISAS
:::.:: .::.:::.::..::::.......::.:::.::.:::::: ::::::::::::.
XP_011 LNVVAFFIICACYIKIYFAVRNPELMATNKDTKIAKKMAILIFTDFTCMAPISFFAISAA
330 340 350 360 370 380
600 610 620 630 640 650
pF1KB9 LKVPLITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRT
.:::::::...:.:::::.::::::::::::::::.:.::::.:::: :: . .:..::
XP_011 FKVPLITVTNSKVLLVLFYPINSCANPFLYAIFTKTFQRDFFLLLSKFGCCKRRAELYRR
390 400 410 420 430 440
660 670 680 690
pF1KB9 ETSSTVHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
. :. .... .:: .:
XP_011 KDFSA-YTSNCKNGFTGSNKPSQSTLKLSTLHCQGTALLDKTRYTEC
450 460 470 480
>>XP_016859579 (OMIM: 152790,176410,238320) PREDICTED: l (487 aa)
initn: 1827 init1: 1538 opt: 1855 Z-score: 1172.3 bits: 226.9 E(85289): 1.5e-58
Smith-Waterman score: 1858; 58.1% identity (84.6% similar) in 468 aa overlap (209-674:1-458)
180 190 200 210 220 230
pF1KB9 KNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL
. : .:.::.:: :::: :....::::::
XP_016 MHNGAFRGATGPKTLDISSTKLQALPSYGL
10 20 30
240 250 260 270 280 290
pF1KB9 ENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILR
:....: : :.:.:::::. : .: :.::.:::::::::: : . ... .... .
XP_016 ESIQRLIATSSYSLKKLPSRETFVNLLEATLTYPSHCCAFRNLPTKEQNFSHSISENFSK
40 50 60 70 80 90
300 310 320 330 340 350
pF1KB9 QEVDYMTQTRGQR--SSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPC
: . . .. .. ::. ..: : :.: ..: .: . :.:.:::::::
XP_016 QCESTVRKVNNKTLYSSMLAESELS---GWD-----YEYGFCLPKTP-RCAPEPDAFNPC
100 110 120 130 140
360 370 380 390 400 410
pF1KB9 EDIMGYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLL
::::::..::::::.:.:::: ::. :: .: ::.:::::::::::::.:::.:.:.:::
XP_016 EDIMGYDFLRVLIWLINILAIMGNMTVLFVLLTSRYKLTVPRFLMCNLSFADFCMGLYLL
150 160 170 180 190 200
420 430 440 450 460 470
pF1KB9 LIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQ
:::::: .::.::.:.:::::::.::..:::::::::::::::::.::::::::::.:..
XP_016 LIASVDSQTKGQYYNHAIDWQTGSGCSTAGFFTVFASELSVYTLTVITLERWHTITYAIH
210 220 230 240 250 260
480 490 500 510 520 530
pF1KB9 LDCKVQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLV
:: :..:::: .:. ::.:. :..:. :.:.:::::::.:::... :::.:....:.
XP_016 LDQKLRLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVETTLSQVYILTILI
270 280 290 300 310 320
540 550 560 570 580 590
pF1KB9 LNVLAFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISAS
:::.:: .::.:::.::..::::.......::.:::.::.:::::: ::::::::::::.
XP_016 LNVVAFFIICACYIKIYFAVRNPELMATNKDTKIAKKMAILIFTDFTCMAPISFFAISAA
330 340 350 360 370 380
600 610 620 630 640 650
pF1KB9 LKVPLITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRT
.:::::::...:.:::::.::::::::::::::::.:.::::.:::: :: . .:..::
XP_016 FKVPLITVTNSKVLLVLFYPINSCANPFLYAIFTKTFQRDFFLLLSKFGCCKRRAELYRR
390 400 410 420 430 440
660 670 680 690
pF1KB9 ETSSTVHNTHPRNGHCSSAPRVTNGSTYILVPLSHLAQN
. :. .... .:: .:
XP_016 KDFSA-YTSNCKNGFTGSNKPSQSTLKLSTLHCQGTALLDKTRYTEC
450 460 470 480
695 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:29:27 2016 done: Sun Nov 6 18:29:29 2016
Total Scan time: 10.940 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]