Result of FASTA (omim) for
pFN21AB9945
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9945, 530 aa
1>>>pF1KB9945 530 - 530 aa - 530 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.6758+/-0.000523; mu= -10.7228+/- 0.033
mean_var=392.6352+/-80.849, 0's: 0 Z-trim(119.4): 34 B-trim: 785 in 2/55
Lambda= 0.064726
statistics sampled from 33411 (33448) to 33411 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.392), width: 16
Scan time: 8.160
The best scores are: opt bits E(85289)
NP_150091 (OMIM: 603620) PC4 and SFRS1-interacting ( 530) 3453 336.9 9.3e-92
NP_001121689 (OMIM: 603620) PC4 and SFRS1-interact ( 530) 3453 336.9 9.3e-92
NP_066967 (OMIM: 603620) PC4 and SFRS1-interacting ( 333) 2160 216.0 1.4e-55
NP_001304827 (OMIM: 603620) PC4 and SFRS1-interact ( 329) 2153 215.3 2.3e-55
NP_001304829 (OMIM: 603620) PC4 and SFRS1-interact ( 324) 1110 117.9 4.6e-26
NP_057157 (OMIM: 616643) hepatoma-derived growth f ( 203) 613 71.3 3.1e-12
XP_006720617 (OMIM: 616643) PREDICTED: hepatoma-de ( 212) 613 71.4 3.2e-12
NP_004485 (OMIM: 600339) hepatoma-derived growth f ( 240) 576 68.0 3.8e-11
NP_001306115 (OMIM: 600339) hepatoma-derived growt ( 263) 445 55.8 2e-07
NP_001119522 (OMIM: 600339) hepatoma-derived growt ( 256) 442 55.5 2.3e-07
NP_001119523 (OMIM: 600339) hepatoma-derived growt ( 233) 437 55.0 3e-07
NP_001306116 (OMIM: 600339) hepatoma-derived growt ( 208) 417 53.1 1e-06
XP_011507756 (OMIM: 600339) PREDICTED: hepatoma-de ( 208) 417 53.1 1e-06
NP_001306117 (OMIM: 600339) hepatoma-derived growt ( 208) 417 53.1 1e-06
XP_011507757 (OMIM: 600339) PREDICTED: hepatoma-de ( 208) 417 53.1 1e-06
XP_011507755 (OMIM: 600339) PREDICTED: hepatoma-de ( 208) 417 53.1 1e-06
>>NP_150091 (OMIM: 603620) PC4 and SFRS1-interacting pro (530 aa)
initn: 3453 init1: 3453 opt: 3453 Z-score: 1768.4 bits: 336.9 E(85289): 9.3e-92
Smith-Waterman score: 3453; 100.0% identity (100.0% similar) in 530 aa overlap (1-530:1-530)
10 20 30 40 50 60
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 NMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 NSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 NKFKNMFLVGEGDSVITQVLNKSLAEQRQHEEANKTKDQGKKGPNKKLEKEQTGSKTLNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 NKFKNMFLVGEGDSVITQVLNKSLAEQRQHEEANKTKDQGKKGPNKKLEKEQTGSKTLNG
430 440 450 460 470 480
490 500 510 520 530
pF1KB9 GSDAQDGNQPQHNGESNEDSKDNHEASTKKKPSSEERETEISLKDSTLDN
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 GSDAQDGNQPQHNGESNEDSKDNHEASTKKKPSSEERETEISLKDSTLDN
490 500 510 520 530
>>NP_001121689 (OMIM: 603620) PC4 and SFRS1-interacting (530 aa)
initn: 3453 init1: 3453 opt: 3453 Z-score: 1768.4 bits: 336.9 E(85289): 9.3e-92
Smith-Waterman score: 3453; 100.0% identity (100.0% similar) in 530 aa overlap (1-530:1-530)
10 20 30 40 50 60
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 NKFKNMFLVGEGDSVITQVLNKSLAEQRQHEEANKTKDQGKKGPNKKLEKEQTGSKTLNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKFKNMFLVGEGDSVITQVLNKSLAEQRQHEEANKTKDQGKKGPNKKLEKEQTGSKTLNG
430 440 450 460 470 480
490 500 510 520 530
pF1KB9 GSDAQDGNQPQHNGESNEDSKDNHEASTKKKPSSEERETEISLKDSTLDN
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSDAQDGNQPQHNGESNEDSKDNHEASTKKKPSSEERETEISLKDSTLDN
490 500 510 520 530
>>NP_066967 (OMIM: 603620) PC4 and SFRS1-interacting pro (333 aa)
initn: 2234 init1: 2160 opt: 2160 Z-score: 1118.6 bits: 216.0 E(85289): 1.4e-55
Smith-Waterman score: 2160; 99.7% identity (100.0% similar) in 327 aa overlap (1-327:1-327)
10 20 30 40 50 60
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIK
:::::::::::::::::::::::::.:
NP_066 NMLKGQHEKEAADRKRKQEEQMETEHQTTCNLQ
310 320 330
>>NP_001304827 (OMIM: 603620) PC4 and SFRS1-interacting (329 aa)
initn: 2227 init1: 2153 opt: 2153 Z-score: 1115.1 bits: 215.3 E(85289): 2.3e-55
Smith-Waterman score: 2153; 99.7% identity (100.0% similar) in 326 aa overlap (1-326:1-326)
10 20 30 40 50 60
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIK
:::::::::::::::::::::::::.
NP_001 NMLKGQHEKEAADRKRKQEEQMETEHFAL
310 320
>>NP_001304829 (OMIM: 603620) PC4 and SFRS1-interacting (324 aa)
initn: 2183 init1: 1092 opt: 1110 Z-score: 588.8 bits: 117.9 E(85289): 4.6e-26
Smith-Waterman score: 2080; 96.9% identity (97.2% similar) in 327 aa overlap (1-327:1-318)
10 20 30 40 50 60
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKR
::::::::::::::::::::::::::::::::: ::::::::::::::::::
NP_001 DTDHEEKASNEDVTKAVDITTPKAARRGRKRKA---------GVVTTATASVNLKVSPKR
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRR
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 NMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIK
:::::::::::::::::::::::::.:
NP_001 NMLKGQHEKEAADRKRKQEEQMETEHQTTCNLQ
300 310 320
>>NP_057157 (OMIM: 616643) hepatoma-derived growth facto (203 aa)
initn: 626 init1: 572 opt: 613 Z-score: 340.8 bits: 71.3 E(85289): 3.1e-12
Smith-Waterman score: 613; 55.6% identity (78.8% similar) in 160 aa overlap (3-155:7-166)
10 20 30 40 50
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPK
:..: :::.:::::::::::::.::.:.::::::.:: ::::::::::::::::
NP_057 MARPRPREYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 DIFPYSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETS
:.:::.: :.:.:: :::::::::::::.::: :::.. :: .::.. .. : . .
NP_057 DLFPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETEGEGGNTADA
70 80 90 100 110 120
120 130 140 150 160
pF1KB9 VSKEDTDHEE-----KASNEDV--TKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTAT
:.:. :. : : .:: . . . :. :.....:: ...
NP_057 SSEEEGDRVEEDGKGKRKNEKAGSKRKKSYTSKKSSKQSRKSPGDEDDKDCKEEENKSSS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 ASVNLKVSPKRGRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKK
NP_057 EGGDAGNDTRNTTSDLQKTSEGT
190 200
>>XP_006720617 (OMIM: 616643) PREDICTED: hepatoma-derive (212 aa)
initn: 626 init1: 572 opt: 613 Z-score: 340.5 bits: 71.4 E(85289): 3.2e-12
Smith-Waterman score: 613; 55.6% identity (78.8% similar) in 160 aa overlap (3-155:7-166)
10 20 30 40 50
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPK
:..: :::.:::::::::::::.::.:.::::::.:: ::::::::::::::::
XP_006 MARPRPREYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 DIFPYSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETS
:.:::.: :.:.:: :::::::::::::.::: :::.. :: .::.. .. : . .
XP_006 DLFPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETEGEGGNTADA
70 80 90 100 110 120
120 130 140 150 160
pF1KB9 VSKEDTDHEE-----KASNEDV--TKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTAT
:.:. :. : : .:: . . . :. :.....:: ...
XP_006 SSEEEGDRVEEDGKGKRKNEKAGSKRKKSYTSKKSSKQSRKSPGDEDDKDCKEEENKSSS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 ASVNLKVSPKRGRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKK
XP_006 EGGDAGNDTRNTTSDLQKTSEGKMLWTIIEID
190 200 210
>>NP_004485 (OMIM: 600339) hepatoma-derived growth facto (240 aa)
initn: 605 init1: 535 opt: 576 Z-score: 321.1 bits: 68.0 E(85289): 3.8e-11
Smith-Waterman score: 611; 43.2% identity (64.8% similar) in 264 aa overlap (3-259:8-239)
10 20 30 40 50
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGP
...: :::.:::::::::::::.::.:..::: .:: .:::::::::::::
NP_004 MSRSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 KDIFPYSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKET
::.::: :.:::.:::::::::.::::::.::: :: :. :.. :.: :: : :
NP_004 KDLFPYEESKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSC----VEEPEPEP
70 80 90 100 110
120 130 140 150 160 170
pF1KB9 SVSKEDTDHEEKA--SNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVN
... : :.. .: :... : : : : :.: :: . ..:: .
NP_004 EAAEGDGDKKGNAEGSSDEEGKLV-IDEPA------KEKNEKGALKRRAGDL--------
120 130 140 150 160
180 190 200 210 220
pF1KB9 LKVSPKRGRPAATEVKIPKPRGRPKM-----VKQPCPSESDIITEEDKSKKKGQEEKQPK
:. :::: . : . :.:. : :..: : : .:.... .. . :
NP_004 LEDSPKRPKEAEN------PEGEEKEAATLEVERPLPME----VEKNSTPSEPGSGRGP-
170 180 190 200 210
230 240 250 260 270 280
pF1KB9 KQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKR
:...:: . ::.. :: . : .. ::
NP_004 --PQEEEEEEDEEEEATKEDAEAPGIRDHESL
220 230 240
290 300 310 320 330 340
pF1KB9 KGGRNFQTAHRRNMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETSM
>>NP_001306115 (OMIM: 600339) hepatoma-derived growth fa (263 aa)
initn: 499 init1: 387 opt: 445 Z-score: 254.5 bits: 55.8 E(85289): 2e-07
Smith-Waterman score: 472; 39.5% identity (61.7% similar) in 248 aa overlap (22-259:43-262)
10 20 30 40 50
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETA
: .::.:..::: .:: .:::::::::
NP_001 LGHLLATKLKRFLLSKGGRRAQIPDVSRATPHTIDEMPEAAVKSTANKYQVFFFGTHETA
20 30 40 50 60 70
60 70 80 90 100
pF1KB9 FLGPKDIFPYSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAAT---KQSNASSDV
::::::.::: :.:::.:::::::::.::::::.::: :: :. : . ..:. .: :
NP_001 FLGPKDLFPYEESKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQPVLSLLQSSQKKSCV
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB9 EVEEKETSVSKEDTDHEEKA--SNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVT
: : : ... : :.. .: :... : : : : :.: :: . ..:: .
NP_001 EEPEPEPEAAEGDGDKKGNAEGSSDEEGKLV-IDEPA------KEKNEKGALKRRAGDL-
140 150 160 170 180
170 180 190 200 210 220
pF1KB9 TATASVNLKVSPKRGRPAATEVKIPKPRGRPKM-----VKQPCPSESDIITEEDKSKKKG
:. :::: . : .:.:. : :..: : : .:.... ..
NP_001 -------LEDSPKRPKEAE------NPEGEEKEAATLEVERPLPME----VEKNSTPSEP
190 200 210 220
230 240 250 260 270 280
pF1KB9 QEEKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDD
. : :...:: . ::.. :: . : .. ::
NP_001 GSGRGP---PQEEEEEEDEEEEATKEDAEAPGIRDHESL
230 240 250 260
290 300 310 320 330 340
pF1KB9 QEGEKKRKGGRNFQTAHRRNMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVE
>>NP_001119522 (OMIM: 600339) hepatoma-derived growth fa (256 aa)
initn: 471 init1: 401 opt: 442 Z-score: 253.1 bits: 55.5 E(85289): 2.3e-07
Smith-Waterman score: 477; 40.0% identity (61.6% similar) in 245 aa overlap (22-259:43-255)
10 20 30 40 50
pF1KB9 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETA
: .::.:..::: .:: .:::::::::
NP_001 LGHLLATKLKRFLLSKGGRRAQIPDVSRATPHTIDEMPEAAVKSTANKYQVFFFGTHETA
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB9 FLGPKDIFPYSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVE
::::::.::: :.:::.:::::::::.::::::.::: :: :. :.. :.: ::
NP_001 FLGPKDLFPYEESKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSC----VEEP
80 90 100 110 120
120 130 140 150 160
pF1KB9 EKETSVSKEDTDHEEKA--SNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTAT
: : ... : :.. .: :... : : : : :.: :: . ..:: .
NP_001 EPEPEAAEGDGDKKGNAEGSSDEEGKLV-IDEPA------KEKNEKGALKRRAGDL----
130 140 150 160 170
170 180 190 200 210 220
pF1KB9 ASVNLKVSPKRGRPAATEVKIPKPRGRPKM-----VKQPCPSESDIITEEDKSKKKGQEE
:. :::: . : .:.:. : :..: : : .:.... ..
NP_001 ----LEDSPKRPKEAE------NPEGEEKEAATLEVERPLPME----VEKNSTPSEPGSG
180 190 200 210 220
230 240 250 260 270 280
pF1KB9 KQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEG
. : :...:: . ::.. :: . : .. ::
NP_001 RGP---PQEEEEEEDEEEEATKEDAEAPGIRDHESL
230 240 250
290 300 310 320 330 340
pF1KB9 EKKRKGGRNFQTAHRRNMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKR
530 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 15:51:18 2016 done: Sun Nov 6 15:51:19 2016
Total Scan time: 8.160 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]