Result of FASTA (omim) for
pFN21AB9944
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9944, 652 aa
1>>>pF1KB9944 652 - 652 aa - 652 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4926+/-0.000357; mu= 13.0508+/- 0.023
mean_var=240.5676+/-50.202, 0's: 0 Z-trim(121.9): 21 B-trim: 0 in 0/55
Lambda= 0.082691
statistics sampled from 39169 (39200) to 39169 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.46), width: 16
Scan time: 10.580
The best scores are: opt bits E(85289)
NP_001154818 (OMIM: 605209) E3 ubiquitin-protein l ( 652) 4557 556.9 8e-158
NP_001154816 (OMIM: 605209) E3 ubiquitin-protein l ( 664) 3658 449.7 1.6e-125
NP_001154817 (OMIM: 605209) E3 ubiquitin-protein l ( 663) 3641 447.7 6.4e-125
NP_001154819 (OMIM: 605209) E3 ubiquitin-protein l ( 572) 3246 400.5 8.9e-111
NP_060693 (OMIM: 605209) E3 ubiquitin-protein liga ( 623) 3246 400.5 9.4e-111
>>NP_001154818 (OMIM: 605209) E3 ubiquitin-protein ligas (652 aa)
initn: 4557 init1: 4557 opt: 4557 Z-score: 2954.4 bits: 556.9 E(85289): 8e-158
Smith-Waterman score: 4557; 99.8% identity (100.0% similar) in 652 aa overlap (1-652:1-652)
10 20 30 40 50 60
pF1KB9 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ESLSEKQGMTQESFDTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTSTSDLFPTASASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESLSEKQGMTQESFDTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTSTSDLFPTASASS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 PDRRVEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL
550 560 570 580 590 600
610 620 630 640 650
pF1KB9 TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
610 620 630 640 650
>>NP_001154816 (OMIM: 605209) E3 ubiquitin-protein ligas (664 aa)
initn: 3647 init1: 3647 opt: 3658 Z-score: 2374.7 bits: 449.7 E(85289): 1.6e-125
Smith-Waterman score: 4523; 98.0% identity (98.2% similar) in 664 aa overlap (1-652:1-664)
10 20 30 40 50 60
pF1KB9 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
70 80 90 100 110 120
130 140 150 160
pF1KB9 ESLSEKQGMTQESF------------DTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTS
:::::::::::::: ::::::::::::::::::::::::::::::::::
NP_001 ESLSEKQGMTQESFEANKENVFHGTKDTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 TSDLFPTASASSTEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSDLFPTASASSTEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTA
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 SFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEE
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 TLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVE
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 AYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSD
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 ISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQG
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB9 SHALCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELN
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 SHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELN
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB9 LGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVL
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB9 CYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQT
610 620 630 640 650 660
650
pF1KB9 RFKN
::::
NP_001 RFKN
>>NP_001154817 (OMIM: 605209) E3 ubiquitin-protein ligas (663 aa)
initn: 2324 init1: 2223 opt: 3641 Z-score: 2363.7 bits: 447.7 E(85289): 6.4e-125
Smith-Waterman score: 4506; 97.9% identity (98.0% similar) in 664 aa overlap (1-652:1-663)
10 20 30 40 50 60
pF1KB9 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
70 80 90 100 110 120
130 140 150 160
pF1KB9 ESLSEKQGMTQESF------------DTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTS
:::::::::::::: ::::::::::::::::::::::::::::::::::
NP_001 ESLSEKQGMTQESFEANKENVFHGTKDTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 TSDLFPTASASSTEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSDLFPTASASSTEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTA
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 SFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEE
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 TLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVE
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 AYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSD
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 ISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQG
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
NP_001 ISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTT-VQDYVCPLQG
430 440 450 460 470
470 480 490 500 510 520
pF1KB9 SHALCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELN
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 SHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELN
480 490 500 510 520 530
530 540 550 560 570 580
pF1KB9 LGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVL
540 550 560 570 580 590
590 600 610 620 630 640
pF1KB9 CYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQT
600 610 620 630 640 650
650
pF1KB9 RFKN
::::
NP_001 RFKN
660
>>NP_001154819 (OMIM: 605209) E3 ubiquitin-protein ligas (572 aa)
initn: 4004 init1: 3232 opt: 3246 Z-score: 2109.8 bits: 400.5 E(85289): 8.9e-111
Smith-Waterman score: 3847; 87.4% identity (87.6% similar) in 652 aa overlap (1-652:1-572)
10 20 30 40 50 60
pF1KB9 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHR-----
70 80 90 100 110
130 140 150 160 170 180
pF1KB9 ESLSEKQGMTQESFDTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTSTSDLFPTASASS
NP_001 ------------------------------------------------------------
190 200 210 220 230 240
pF1KB9 TEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQED
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 ---------------SGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQED
120 130 140 150 160
250 260 270 280 290 300
pF1KB9 LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB9 DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB9 EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB9 EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB9 PDRRVEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN
410 420 430 440 450 460
550 560 570 580 590 600
pF1KB9 NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL
470 480 490 500 510 520
610 620 630 640 650
pF1KB9 TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
530 540 550 560 570
>>NP_060693 (OMIM: 605209) E3 ubiquitin-protein ligase C (623 aa)
initn: 4139 init1: 3240 opt: 3246 Z-score: 2109.4 bits: 400.5 E(85289): 9.4e-111
Smith-Waterman score: 4089; 91.7% identity (93.1% similar) in 652 aa overlap (1-652:1-623)
10 20 30 40 50 60
pF1KB9 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ESLSEKQGMTQESFDTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTSTSDLFPTASASS
::::::::::::::. :: : . . :. :: ...:
NP_060 ESLSEKQGMTQESFEM------------VP-------CCVAQAGLKLLGSSDPPTLASQS
130 140 150 160
190 200 210 220 230 240
pF1KB9 TEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQED
. ::::::::::::::::::::::::::::::::::::::::::::::
NP_060 IVIT----------GSGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQED
170 180 190 200 210
250 260 270 280 290 300
pF1KB9 LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB9 DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB9 EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB9 EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB9 PDRRVEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB9 NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL
520 530 540 550 560 570
610 620 630 640 650
pF1KB9 TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
580 590 600 610 620
652 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:15:07 2016 done: Sun Nov 6 06:15:09 2016
Total Scan time: 10.580 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]