Result of FASTA (omim) for
pFN21AB9761
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9761, 766 aa
1>>>pF1KB9761 766 - 766 aa - 766 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8302+/-0.000392; mu= 13.2620+/- 0.024
mean_var=113.6326+/-23.886, 0's: 0 Z-trim(115.0): 174 B-trim: 721 in 1/52
Lambda= 0.120316
statistics sampled from 24985 (25179) to 24985 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.295), width: 16
Scan time: 12.790
The best scores are: opt bits E(85289)
XP_005267157 (OMIM: 601665,603128) PREDICTED: sing ( 766) 5206 915.2 0
NP_005059 (OMIM: 601665,603128) single-minded homo ( 766) 5206 915.2 0
XP_016866686 (OMIM: 601665,603128) PREDICTED: sing ( 766) 5206 915.2 0
XP_011534374 (OMIM: 601665,603128) PREDICTED: sing ( 481) 3205 567.8 3.8e-161
NP_033664 (OMIM: 600892) single-minded homolog 2 s ( 570) 2245 401.2 6.3e-111
NP_005060 (OMIM: 600892) single-minded homolog 2 l ( 667) 2245 401.2 7.2e-111
XP_016883931 (OMIM: 600892) PREDICTED: single-mind ( 327) 1953 350.4 7.3e-96
XP_011527996 (OMIM: 600892) PREDICTED: single-mind ( 566) 1674 302.1 4.3e-81
NP_851397 (OMIM: 603348) hypoxia-inducible factor ( 735) 916 170.6 2.2e-41
NP_001521 (OMIM: 603348) hypoxia-inducible factor ( 826) 916 170.6 2.4e-41
NP_001230013 (OMIM: 603348) hypoxia-inducible fact ( 850) 916 170.6 2.4e-41
NP_001421 (OMIM: 603349,611783) endothelial PAS do ( 870) 835 156.6 4.2e-37
XP_011531000 (OMIM: 603349,611783) PREDICTED: endo ( 883) 835 156.6 4.3e-37
XP_005259213 (OMIM: 609976) PREDICTED: hypoxia-ind ( 587) 782 147.3 1.8e-34
XP_005259212 (OMIM: 609976) PREDICTED: hypoxia-ind ( 587) 782 147.3 1.8e-34
XP_016882627 (OMIM: 609976) PREDICTED: hypoxia-ind ( 663) 782 147.3 2e-34
NP_690007 (OMIM: 609976) hypoxia-inducible factor ( 667) 782 147.3 2e-34
NP_690008 (OMIM: 609976) hypoxia-inducible factor ( 669) 782 147.3 2e-34
XP_016882626 (OMIM: 609976) PREDICTED: hypoxia-ind ( 703) 782 147.3 2.1e-34
XP_016882625 (OMIM: 609976) PREDICTED: hypoxia-ind ( 707) 782 147.3 2.1e-34
XP_016882624 (OMIM: 609976) PREDICTED: hypoxia-ind ( 709) 782 147.3 2.1e-34
XP_016882623 (OMIM: 609976) PREDICTED: hypoxia-ind ( 711) 782 147.3 2.1e-34
XP_005259209 (OMIM: 609976) PREDICTED: hypoxia-ind ( 713) 782 147.3 2.1e-34
XP_016882622 (OMIM: 609976) PREDICTED: hypoxia-ind ( 749) 782 147.3 2.2e-34
XP_016882621 (OMIM: 609976) PREDICTED: hypoxia-ind ( 755) 782 147.3 2.2e-34
XP_016877075 (OMIM: 609430) PREDICTED: neuronal PA ( 831) 553 107.6 2.2e-22
XP_016877077 (OMIM: 609430) PREDICTED: neuronal PA ( 831) 553 107.6 2.2e-22
XP_016877076 (OMIM: 609430) PREDICTED: neuronal PA ( 831) 553 107.6 2.2e-22
NP_071406 (OMIM: 609430) neuronal PAS domain-conta ( 901) 553 107.6 2.4e-22
NP_001159365 (OMIM: 609430) neuronal PAS domain-co ( 903) 553 107.6 2.4e-22
XP_011535372 (OMIM: 609430) PREDICTED: neuronal PA ( 918) 553 107.6 2.4e-22
NP_775182 (OMIM: 609430) neuronal PAS domain-conta ( 920) 553 107.6 2.4e-22
NP_001158221 (OMIM: 609430) neuronal PAS domain-co ( 933) 553 107.6 2.4e-22
XP_016877074 (OMIM: 609430) PREDICTED: neuronal PA ( 939) 553 107.6 2.5e-22
XP_011535369 (OMIM: 609430) PREDICTED: neuronal PA ( 950) 553 107.6 2.5e-22
XP_016877073 (OMIM: 609430) PREDICTED: neuronal PA ( 956) 553 107.6 2.5e-22
XP_005268049 (OMIM: 609430) PREDICTED: neuronal PA ( 967) 553 107.6 2.5e-22
XP_005268048 (OMIM: 609430) PREDICTED: neuronal PA ( 969) 553 107.6 2.5e-22
XP_016877071 (OMIM: 609430) PREDICTED: neuronal PA ( 986) 553 107.6 2.6e-22
XP_011535374 (OMIM: 609430) PREDICTED: neuronal PA ( 900) 548 106.7 4.3e-22
XP_011535373 (OMIM: 609430) PREDICTED: neuronal PA ( 936) 548 106.8 4.5e-22
XP_011535371 (OMIM: 609430) PREDICTED: neuronal PA ( 966) 548 106.8 4.6e-22
XP_016877072 (OMIM: 609430) PREDICTED: neuronal PA ( 983) 548 106.8 4.7e-22
NP_690009 (OMIM: 609976) hypoxia-inducible factor ( 450) 510 100.0 2.4e-20
XP_016882631 (OMIM: 609976) PREDICTED: hypoxia-ind ( 474) 510 100.0 2.5e-20
XP_005259210 (OMIM: 609976) PREDICTED: hypoxia-ind ( 594) 510 100.0 3e-20
NP_071907 (OMIM: 609976) hypoxia-inducible factor ( 600) 510 100.0 3e-20
XP_016882629 (OMIM: 609976) PREDICTED: hypoxia-ind ( 642) 510 100.1 3.2e-20
XP_016882630 (OMIM: 609976) PREDICTED: hypoxia-ind ( 642) 510 100.1 3.2e-20
XP_016882628 (OMIM: 609976) PREDICTED: hypoxia-ind ( 642) 510 100.1 3.2e-20
>>XP_005267157 (OMIM: 601665,603128) PREDICTED: single-m (766 aa)
initn: 5206 init1: 5206 opt: 5206 Z-score: 4888.3 bits: 915.2 E(85289): 0
Smith-Waterman score: 5206; 100.0% identity (100.0% similar) in 766 aa overlap (1-766:1-766)
10 20 30 40 50 60
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 DPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 TPQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 SASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQLASINGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQLASINGAGK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 KHSLCFANYQQPPPTGEVCHGSALANTSPCDHIQQREGKMLSPHENDYDNSPTALSRISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KHSLCFANYQQPPPTGEVCHGSALANTSPCDHIQQREGKMLSPHENDYDNSPTALSRISS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 PNSDRISKSSLILAKDYLHSDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PNSDRISKSSLILAKDYLHSDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEH
670 680 690 700 710 720
730 740 750 760
pF1KB9 LYDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS
::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LYDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS
730 740 750 760
>>NP_005059 (OMIM: 601665,603128) single-minded homolog (766 aa)
initn: 5206 init1: 5206 opt: 5206 Z-score: 4888.3 bits: 915.2 E(85289): 0
Smith-Waterman score: 5206; 100.0% identity (100.0% similar) in 766 aa overlap (1-766:1-766)
10 20 30 40 50 60
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 DPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 TPQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TPQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 SASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQLASINGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQLASINGAGK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 KHSLCFANYQQPPPTGEVCHGSALANTSPCDHIQQREGKMLSPHENDYDNSPTALSRISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KHSLCFANYQQPPPTGEVCHGSALANTSPCDHIQQREGKMLSPHENDYDNSPTALSRISS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 PNSDRISKSSLILAKDYLHSDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PNSDRISKSSLILAKDYLHSDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEH
670 680 690 700 710 720
730 740 750 760
pF1KB9 LYDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS
::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LYDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS
730 740 750 760
>>XP_016866686 (OMIM: 601665,603128) PREDICTED: single-m (766 aa)
initn: 5206 init1: 5206 opt: 5206 Z-score: 4888.3 bits: 915.2 E(85289): 0
Smith-Waterman score: 5206; 100.0% identity (100.0% similar) in 766 aa overlap (1-766:1-766)
10 20 30 40 50 60
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 DPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 TPQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 SASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQLASINGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQLASINGAGK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 KHSLCFANYQQPPPTGEVCHGSALANTSPCDHIQQREGKMLSPHENDYDNSPTALSRISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KHSLCFANYQQPPPTGEVCHGSALANTSPCDHIQQREGKMLSPHENDYDNSPTALSRISS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 PNSDRISKSSLILAKDYLHSDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNSDRISKSSLILAKDYLHSDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEH
670 680 690 700 710 720
730 740 750 760
pF1KB9 LYDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS
730 740 750 760
>>XP_011534374 (OMIM: 601665,603128) PREDICTED: single-m (481 aa)
initn: 3205 init1: 3205 opt: 3205 Z-score: 3014.1 bits: 567.8 E(85289): 3.8e-161
Smith-Waterman score: 3205; 100.0% identity (100.0% similar) in 476 aa overlap (1-476:1-476)
10 20 30 40 50 60
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 DPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRARSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 TPQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPG
XP_011 G
>>NP_033664 (OMIM: 600892) single-minded homolog 2 short (570 aa)
initn: 2166 init1: 2070 opt: 2245 Z-score: 2112.4 bits: 401.2 E(85289): 6.3e-111
Smith-Waterman score: 2245; 69.5% identity (84.9% similar) in 511 aa overlap (1-503:1-504)
10 20 30 40 50 60
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
:::::::::.:::::::.:::::::::::::::::::::::::::::::::::.::::::
NP_033 MKEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
:.:::. ::..:::.:..:::::::::::::.:::: :::::::::::::::::::::::
NP_033 GDAWGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
::::::::::.:::::::::::::: : :..::::::::::::::::::::::::::.::
NP_033 GNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAKRNAGLTCSGY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
:::::::::::::: :::: .:.::: :::::::.::::::.:::::.:::::::::::.
NP_033 KVIHCSGYLKIRQYMLDMSLYDSCYQIVGLVAVGQSLPPSAITEIKLYSNMFMFRASLDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
:::::::::.:.:::::::::::::::::::::.:::: :::::::::::::::::.:.:
NP_033 KLIFLDSRVTEVTGYEPQDLIEKTLYHHVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
.:::::::::::.::::::::::::::::::::. ::: :::::.:.:..: :. ..
NP_033 RGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTEIEYKELQLSLEQVSTAKSQDSWRTAL
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 TPTMTDNRKGAKSRLSSSKSKSRTSPYP--QYSGFHTERSESDHDSQWGGSPLTDTASPQ
. : ..:: .: . .. :.: ::.::: :::.:. .. : . ..: .:: ...:.:
NP_033 S-TSQETRKLVKPKNTKMKTKLRTNPYPPQQYSSFQMDKLECGQLGNWRASPPASAAAP-
370 380 390 400 410
420 430 440 450 460 470
pF1KB9 LLDPADRPGSQHDASCAYRQFSDRSSLCYG-FALDHSRLVEERHFHTQAC----EGGRCE
: .: :. . ..: : :: : :: :.. .. : .:. ::
NP_033 ---PELQPHSESSDLLYTPSYSLPFSYHYGHFPLD-SHVFSSKKPMLPAKFGQPQGSPCE
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB9 AGRYFLGT-PQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDS
..:.::.: : .:. : . .: ...::
NP_033 VARFFLSTLPASGECQWHYANPLVP-SSSSPAKNPPEPPANTARHSLVPSYEGGSGLLVG
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB9 VVSSPDPGSASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQL
NP_033 KVGGLRTAGSRSSHGGGWQMETEPSRFGQTCPLSASK
540 550 560 570
>>NP_005060 (OMIM: 600892) single-minded homolog 2 long (667 aa)
initn: 2200 init1: 2070 opt: 2245 Z-score: 2111.4 bits: 401.2 E(85289): 7.2e-111
Smith-Waterman score: 2245; 69.5% identity (84.9% similar) in 511 aa overlap (1-503:1-504)
10 20 30 40 50 60
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
:::::::::.:::::::.:::::::::::::::::::::::::::::::::::.::::::
NP_005 MKEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
:.:::. ::..:::.:..:::::::::::::.:::: :::::::::::::::::::::::
NP_005 GDAWGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
::::::::::.:::::::::::::: : :..::::::::::::::::::::::::::.::
NP_005 GNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAKRNAGLTCSGY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
:::::::::::::: :::: .:.::: :::::::.::::::.:::::.:::::::::::.
NP_005 KVIHCSGYLKIRQYMLDMSLYDSCYQIVGLVAVGQSLPPSAITEIKLYSNMFMFRASLDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
:::::::::.:.:::::::::::::::::::::.:::: :::::::::::::::::.:.:
NP_005 KLIFLDSRVTEVTGYEPQDLIEKTLYHHVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
.:::::::::::.::::::::::::::::::::. ::: :::::.:.:..: :. ..
NP_005 RGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTEIEYKELQLSLEQVSTAKSQDSWRTAL
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 TPTMTDNRKGAKSRLSSSKSKSRTSPYP--QYSGFHTERSESDHDSQWGGSPLTDTASPQ
. : ..:: .: . .. :.: ::.::: :::.:. .. : . ..: .:: ...:.:
NP_005 S-TSQETRKLVKPKNTKMKTKLRTNPYPPQQYSSFQMDKLECGQLGNWRASPPASAAAP-
370 380 390 400 410
420 430 440 450 460 470
pF1KB9 LLDPADRPGSQHDASCAYRQFSDRSSLCYG-FALDHSRLVEERHFHTQAC----EGGRCE
: .: :. . ..: : :: : :: :.. .. : .:. ::
NP_005 ---PELQPHSESSDLLYTPSYSLPFSYHYGHFPLD-SHVFSSKKPMLPAKFGQPQGSPCE
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB9 AGRYFLGT-PQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDS
..:.::.: : .:. : . .: ...::
NP_005 VARFFLSTLPASGECQWHYANPLVP-SSSSPAKNPPEPPANTARHSLVPSYEAPAAAVRR
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB9 VVSSPDPGSASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQL
NP_005 FGEDTAPPSFPSCGHYREEPALGPAKAARQAARDGARLALARAAPECCAPPTPEAPGAPA
540 550 560 570 580 590
>>XP_016883931 (OMIM: 600892) PREDICTED: single-minded h (327 aa)
initn: 1953 init1: 1953 opt: 1953 Z-score: 1842.1 bits: 350.4 E(85289): 7.3e-96
Smith-Waterman score: 1953; 88.9% identity (97.5% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
:::::::::.:::::::.:::::::::::::::::::::::::::::::::::.::::::
XP_016 MKEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
:.:::. ::..:::.:..:::::::::::::.:::: :::::::::::::::::::::::
XP_016 GDAWGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
::::::::::.:::::::::::::: : :..::::::::::::::::::::::::::.::
XP_016 GNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAKRNAGLTCSGY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
:::::::::::::: :::: .:.::: :::::::.::::::.:::::.:::::::::::.
XP_016 KVIHCSGYLKIRQYMLDMSLYDSCYQIVGLVAVGQSLPPSAITEIKLYSNMFMFRASLDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
:::::::::.:.:::::::::::::::::::::.:::: :::::::::::::::::.:.:
XP_016 KLIFLDSRVTEVTGYEPQDLIEKTLYHHVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS
.:::::::::::.::::::::::::
XP_016 RGGWVWVQSYATVVHNSRSSRPHCIGD
310 320
>>XP_011527996 (OMIM: 600892) PREDICTED: single-minded h (566 aa)
initn: 1629 init1: 1499 opt: 1674 Z-score: 1576.8 bits: 302.1 E(85289): 4.3e-81
Smith-Waterman score: 1674; 65.1% identity (81.7% similar) in 410 aa overlap (102-503:1-403)
80 90 100 110 120 130
pF1KB9 PLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIYEYIHPA
:::::::::::::::::::::::::::::.
XP_011 MYISETASVHLGLSQVELTGNSIYEYIHPS
10 20 30
140 150 160 170 180 190
pF1KB9 DHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGYKVIHCSGYLKI
:::::::::::::: : :..::::::::::::::::::::::::::.:::::::::::::
XP_011 DHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAKRNAGLTCSGYKVIHCSGYLKI
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB9 RQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAE
::: :::: .:.::: :::::::.::::::.:::::.:::::::::::.:::::::::.:
XP_011 RQYMLDMSLYDSCYQIVGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTE
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB9 LTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYA
.:::::::::::::::::::::.:::: :::::::::::::::::.:.:.::::::::::
XP_011 VTGYEPQDLIEKTLYHHVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYA
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB9 TIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSSTPTMTDNRKGA
:.::::::::::::::::::::. ::: :::::.:.:..: :. .. . : ..:: .
XP_011 TVVHNSRSSRPHCIVSVNYVLTEIEYKELQLSLEQVSTAKSQDSWRTALS-TSQETRKLV
220 230 240 250 260
380 390 400 410 420
pF1KB9 KSRLSSSKSKSRTSPYP--QYSGFHTERSESDHDSQWGGSPLTDTASPQLLDPADRPGSQ
: . .. :.: ::.::: :::.:. .. : . ..: .:: ...:.: : .: :.
XP_011 KPKNTKMKTKLRTNPYPPQQYSSFQMDKLECGQLGNWRASPPASAAAP----PELQPHSE
270 280 290 300 310 320
430 440 450 460 470 480
pF1KB9 HDASCAYRQFSDRSSLCYG-FALDHSRLVEERHFHTQAC----EGGRCEAGRYFLGT-PQ
. ..: : :: : :: :.. .. : .:. ::..:.::.: :
XP_011 SSDLLYTPSYSLPFSYHYGHFPLD-SHVFSSKKPMLPAKFGQPQGSPCEVARFFLSTLPA
330 340 350 360 370 380
490 500 510 520 530 540
pF1KB9 AGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPGSAS
.:. : . .: ...::
XP_011 SGECQWHYANPLVP-SSSSPAKNPPEPPANTARHSLVPSYEAPAAAVRRFGEDTAPPSFP
390 400 410 420 430 440
>>NP_851397 (OMIM: 603348) hypoxia-inducible factor 1-al (735 aa)
initn: 947 init1: 426 opt: 916 Z-score: 864.1 bits: 170.6 E(85289): 2.2e-41
Smith-Waterman score: 916; 40.7% identity (71.2% similar) in 371 aa overlap (2-365:19-376)
10 20 30 40
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASII
::::..:::.:: ::. :::::. :::: ..:.:::::..
NP_851 MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 RLTTSYLKMRVVFPEGLGEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMY
::: :::..: .. : . :.. ... :..::::..:.. :: ..:
NP_851 RLTISYLRVRKLLDAG---------DLDIEDDMKAQMNCFYLKALDGFVMVLTDDGDMIY
70 80 90 100 110
110 120 130 140 150 160
pF1KB9 ISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLR
::.... ..::.: ::::.:.... :: ::.:: .:: :. . .: . .::::::
NP_851 ISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLT-HRNGLVKKGKEQNTQRSFFLR
120 130 140 150 160 170
170 180 190 200 210
pF1KB9 MKCVLAKRN--AGLTCGGYKVIHCSGYLKIRQYSLDMSPFDGCYQN---VGLVAVGHSLP
:::.:..:. .. . .::.::.:.... :. . . . :.. . :: . . .:
NP_851 MKCTLTSRGRTMNIKSATWKVLHCTGHIHV--YDTNSNQPQCGYKKPPMTCLVLICEPIP
180 190 200 210 220
220 230 240 250 260 270
pF1KB9 -PSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHL
:: . :: : :. :. : :::::. . : :..:: ::::..:. ...:.. :. :. ::
NP_851 HPSNI-EIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB9 RCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEY
.:: ...:::::: ::.:::.::.:::.. ::...:...:.:.::: ::::..
NP_851 TKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQ
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB9 KGLQLSLDQISAS-KPAFSYTSSSTPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTE
. : .::.: ::. : . : .:
NP_851 HDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDT
350 360 370 380 390 400
>>NP_001521 (OMIM: 603348) hypoxia-inducible factor 1-al (826 aa)
initn: 947 init1: 426 opt: 916 Z-score: 863.3 bits: 170.6 E(85289): 2.4e-41
Smith-Waterman score: 916; 40.7% identity (71.2% similar) in 371 aa overlap (2-365:19-376)
10 20 30 40
pF1KB9 MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASII
::::..:::.:: ::. :::::. :::: ..:.:::::..
NP_001 MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 RLTTSYLKMRVVFPEGLGEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMY
::: :::..: .. : . :.. ... :..::::..:.. :: ..:
NP_001 RLTISYLRVRKLLDAG---------DLDIEDDMKAQMNCFYLKALDGFVMVLTDDGDMIY
70 80 90 100 110
110 120 130 140 150 160
pF1KB9 ISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLR
::.... ..::.: ::::.:.... :: ::.:: .:: :. . .: . .::::::
NP_001 ISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLT-HRNGLVKKGKEQNTQRSFFLR
120 130 140 150 160 170
170 180 190 200 210
pF1KB9 MKCVLAKRN--AGLTCGGYKVIHCSGYLKIRQYSLDMSPFDGCYQN---VGLVAVGHSLP
:::.:..:. .. . .::.::.:.... :. . . . :.. . :: . . .:
NP_001 MKCTLTSRGRTMNIKSATWKVLHCTGHIHV--YDTNSNQPQCGYKKPPMTCLVLICEPIP
180 190 200 210 220
220 230 240 250 260 270
pF1KB9 -PSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHL
:: . :: : :. :. : :::::. . : :..:: ::::..:. ...:.. :. :. ::
NP_001 HPSNI-EIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB9 RCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEY
.:: ...:::::: ::.:::.::.:::.. ::...:...:.:.::: ::::..
NP_001 TKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQ
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB9 KGLQLSLDQISAS-KPAFSYTSSSTPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTE
. : .::.: ::. : . : .:
NP_001 HDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDT
350 360 370 380 390 400
766 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:38:31 2016 done: Mon Nov 7 03:38:33 2016
Total Scan time: 12.790 Total Display time: 0.160
Function used was FASTA [36.3.4 Apr, 2011]