Result of FASTA (omim) for
pFN21AB9693
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9693, 252 aa
1>>>pF1KB9693 252 - 252 aa - 252 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.7384+/-0.000379; mu= -3.8139+/- 0.024
mean_var=599.7717+/-135.397, 0's: 0 Z-trim(127.3): 595 B-trim: 6262 in 2/58
Lambda= 0.052370
statistics sampled from 54195 (55511) to 54195 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.863), E-opt: 0.2 (0.651), width: 16
Scan time: 9.170
The best scores are: opt bits E(85289)
NP_114124 (OMIM: 606139) Krueppel-like factor 16 [ ( 252) 1774 147.2 2.6e-35
NP_619638 (OMIM: 609393) Krueppel-like factor 14 [ ( 323) 719 67.7 2.9e-11
NP_057079 (OMIM: 605328,612001) Krueppel-like fact ( 288) 671 64.0 3.4e-10
NP_001197 (OMIM: 602902) Krueppel-like factor 9 [H ( 244) 547 54.5 2e-07
NP_001027453 (OMIM: 601878) Krueppel-like factor 1 ( 469) 542 54.6 3.8e-07
NP_005646 (OMIM: 601878) Krueppel-like factor 10 i ( 480) 542 54.6 3.9e-07
NP_001171189 (OMIM: 603301,610508) Krueppel-like f ( 495) 526 53.4 9.1e-07
NP_001171187 (OMIM: 603301,610508) Krueppel-like f ( 495) 526 53.4 9.1e-07
NP_003588 (OMIM: 603301,610508) Krueppel-like fact ( 512) 526 53.4 9.3e-07
NP_945194 (OMIM: 608306) transcription factor Sp8 ( 490) 521 53.0 1.2e-06
NP_874359 (OMIM: 608306) transcription factor Sp8 ( 508) 521 53.0 1.2e-06
NP_057354 (OMIM: 602016) Krueppel-like factor 2 [H ( 355) 504 51.5 2.4e-06
XP_011525944 (OMIM: 111150,600599,613566,613673) P ( 324) 502 51.3 2.5e-06
NP_006554 (OMIM: 111150,600599,613566,613673) Krue ( 362) 502 51.4 2.7e-06
NP_001003845 (OMIM: 609391) transcription factor S ( 398) 501 51.3 3e-06
XP_005246599 (OMIM: 609391) PREDICTED: transcripti ( 442) 501 51.4 3.2e-06
XP_011536202 (OMIM: 606633,613849) PREDICTED: tran ( 413) 500 51.3 3.2e-06
NP_001287766 (OMIM: 606633,613849) transcription f ( 413) 500 51.3 3.2e-06
XP_011509461 (OMIM: 609391) PREDICTED: transcripti ( 454) 501 51.4 3.2e-06
NP_690599 (OMIM: 606633,613849) transcription fact ( 431) 500 51.3 3.3e-06
NP_001166938 (OMIM: 606633,613849) transcription f ( 431) 500 51.3 3.3e-06
NP_054798 (OMIM: 606465) Krueppel-like factor 15 [ ( 416) 457 48.1 3.1e-05
XP_005247457 (OMIM: 606465) PREDICTED: Krueppel-li ( 416) 457 48.1 3.1e-05
XP_011511045 (OMIM: 606465) PREDICTED: Krueppel-li ( 435) 457 48.1 3.1e-05
NP_004226 (OMIM: 602253) Krueppel-like factor 4 is ( 479) 458 48.2 3.1e-05
NP_001273747 (OMIM: 602903) Krueppel-like factor 5 ( 366) 450 47.4 4.1e-05
NP_001313472 (OMIM: 600540) transcription factor S ( 471) 451 47.7 4.5e-05
NP_001291 (OMIM: 176807,602053,613659) Krueppel-li ( 283) 445 46.9 4.6e-05
NP_001721 (OMIM: 602903) Krueppel-like factor 5 is ( 457) 450 47.6 4.7e-05
NP_001300981 (OMIM: 602253) Krueppel-like factor 4 ( 513) 450 47.7 5e-05
NP_001257872 (OMIM: 604865) Krueppel-like factor 7 ( 269) 443 46.7 5e-05
NP_001257873 (OMIM: 604865) Krueppel-like factor 7 ( 274) 443 46.7 5e-05
XP_016860650 (OMIM: 604865) PREDICTED: Krueppel-li ( 302) 443 46.8 5.3e-05
NP_003700 (OMIM: 604865) Krueppel-like factor 7 is ( 302) 443 46.8 5.3e-05
NP_001313471 (OMIM: 600540) transcription factor S ( 767) 451 48.0 5.9e-05
XP_005249885 (OMIM: 600540) PREDICTED: transcripti ( 767) 451 48.0 5.9e-05
NP_003103 (OMIM: 600540) transcription factor Sp4 ( 784) 451 48.0 6e-05
NP_001017371 (OMIM: 601804) transcription factor S ( 713) 446 47.6 7.4e-05
NP_001166183 (OMIM: 601804) transcription factor S ( 778) 446 47.6 7.7e-05
NP_003102 (OMIM: 601804) transcription factor Sp3 ( 781) 446 47.6 7.8e-05
NP_001238754 (OMIM: 189906) transcription factor S ( 737) 442 47.3 9.3e-05
XP_011510376 (OMIM: 604865) PREDICTED: Krueppel-li ( 270) 431 45.8 9.4e-05
XP_011510375 (OMIM: 604865) PREDICTED: Krueppel-li ( 272) 431 45.8 9.4e-05
XP_016860651 (OMIM: 604865) PREDICTED: Krueppel-li ( 275) 431 45.8 9.5e-05
NP_003100 (OMIM: 189906) transcription factor Sp1 ( 778) 442 47.3 9.5e-05
XP_011536998 (OMIM: 189906) PREDICTED: transcripti ( 778) 442 47.3 9.5e-05
NP_612482 (OMIM: 189906) transcription factor Sp1 ( 785) 442 47.3 9.6e-05
XP_011510374 (OMIM: 604865) PREDICTED: Krueppel-li ( 303) 431 45.9 0.0001
XP_005246983 (OMIM: 604865) PREDICTED: Krueppel-li ( 303) 431 45.9 0.0001
XP_006712878 (OMIM: 604865) PREDICTED: Krueppel-li ( 303) 431 45.9 0.0001
>>NP_114124 (OMIM: 606139) Krueppel-like factor 16 [Homo (252 aa)
initn: 1774 init1: 1774 opt: 1774 Z-score: 755.0 bits: 147.2 E(85289): 2.6e-35
Smith-Waterman score: 1774; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KB9 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PPPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSGRAPGAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 PPPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSGRAPGAAP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SAAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SAAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HTGEKRFSCPLCSKRFTRSDHLAKHARRHPGFHPDLLRRPGARSTSPSDSLPCSLAGSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 HTGEKRFSCPLCSKRFTRSDHLAKHARRHPGFHPDLLRRPGARSTSPSDSLPCSLAGSPA
190 200 210 220 230 240
250
pF1KB9 PSPAPSPAPAGL
::::::::::::
NP_114 PSPAPSPAPAGL
250
>>NP_619638 (OMIM: 609393) Krueppel-like factor 14 [Homo (323 aa)
initn: 1049 init1: 661 opt: 719 Z-score: 323.2 bits: 67.7 E(85289): 2.9e-11
Smith-Waterman score: 777; 50.4% identity (61.3% similar) in 282 aa overlap (38-250:38-318)
10 20 30 40 50 60
pF1KB9 VDYFAADVLMAISSGAVVHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPP---P--
::: .: :: :.: :: :::: : :
NP_619 LDYFAAECLVSMSAGAVVHRRPPDPEGAGGAAGSEVGAAPPESALPG-PGPPGPASVPQL
10 20 30 40 50 60
70 80 90
pF1KB9 PAASGPGPGAA-AAPHLLAASILADLRGGPGA----------------------------
: . .:.:::. :::::::::. :::::. :
NP_619 PQVPAPSPGAGGAAPHLLAASVWADLRGSSGEGSWENSGEAPRASSGFSDPIPCSVQTPC
70 80 90 100 110 120
100 110 120
pF1KB9 ---APG-GAS----PASSSSAASSPSSGRAPGA----------------APSA-------
::. ::. : :::.: . ::. :::: ::.:
NP_619 SELAPASGAAAVCAPESSSDAPAVPSAPAAPGAPAASGGFSGGALGAGPAPAADQAPRRR
130 140 150 160 170 180
130 140 150 160 170
pF1KB9 ----AAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHH
::: :.:::: :.:::::::::::: :::::::::.::: :::::.::::::::.
NP_619 SVTPAAKRHQCPFPGCTKAYYKSSHLKSHQRTHTGERPFSCDWLDCDKKFTRSDELARHY
190 200 210 220 230 240
180 190 200 210 220 230
pF1KB9 RTHTGEKRFSCPLCSKRFTRSDHLAKHARRHPGFHPDLLRRPGARSTSPSDSLPCSLAGS
:::::::::::::: :.:.:::::.::::::: .:::... : : : : : . :
NP_619 RTHTGEKRFSCPLCPKQFSRSDHLTKHARRHPTYHPDMIEYRGRRRTPRIDPPLTSEVES
250 260 270 280 290 300
240 250
pF1KB9 PAPSPAPSPAPAGL
: . .:.:::.
NP_619 SASGSGPGPAPSFTTCL
310 320
>>NP_057079 (OMIM: 605328,612001) Krueppel-like factor 1 (288 aa)
initn: 846 init1: 576 opt: 671 Z-score: 304.1 bits: 64.0 E(85289): 3.4e-10
Smith-Waterman score: 678; 47.5% identity (60.2% similar) in 284 aa overlap (10-247:9-288)
10 20 30 40
pF1KB9 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPE----GAGPAA------------GLD--
.:::. :...:: :::: : ::: ::. :: : :
NP_057 MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDGKDSA
10 20 30 40 50
50 60 70
pF1KB9 -----VR--------------AARREAASPG---TPGP-PPPPPAASGPGP-GAAAAPHL
.: : :::.:. :: ::: : ..:: ::::::
NP_057 SLFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPS
60 70 80 90 100 110
80 90 100 110 120 130
pF1KB9 LAASILADLRG-GPGAAPGGASPASSSSAASSPSSGRAPGAAP-SAAAKSHRCPFPDCAK
: : : : :: ::.:. . :. . : . ..:.: . : :
NP_057 PAWSEPEPEAGLEPEREPG---PAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCEK
120 130 140 150 160 170
140 150 160 170 180 190
pF1KB9 AYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRF
.: ::::::.:::::::::::::.:: :.::::::::::::.:::::::.::::.: :::
NP_057 VYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRF
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB9 TRSDHLAKHARRHPGFHPDLLRR--PGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL
:::::.:::::: .::: .:.: :.:. : :: : :.::. ::: ::
NP_057 MRSDHLTKHARRHANFHPGMLQRRGGGSRTGSLSD-YSRSDASSPTISPASSP
240 250 260 270 280
>>NP_001197 (OMIM: 602902) Krueppel-like factor 9 [Homo (244 aa)
initn: 734 init1: 495 opt: 547 Z-score: 254.2 bits: 54.5 E(85289): 2e-07
Smith-Waterman score: 571; 43.4% identity (61.9% similar) in 244 aa overlap (1-219:1-235)
10 20 30 40 50
pF1KB9 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPE-GAGPAAGLDVRAARREAASP-GTPGP
:::: : .:. ::. :..::. :.: :: :..: : .: .::... : ::
NP_001 MSAA-AYMDFVAAQCLVSISNRAAV------PEHGVAPDAE-RLRLPEREVTKEHGDPGD
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 PPPP-----PAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAAS---SP
:.. : . . :. .: .: :. : ... :..: ::
NP_001 TWKDYCTLVTIAKSLLDLNKYRP-IQTPSVCSDSLESPDEDMGSDSDVTTESGSSPSHSP
60 70 80 90 100 110
120 130 140 150
pF1KB9 SSGRAPGAAPS---------------AAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGER
. ::.::: :. : :.::. :.:.: ::::::.: :.:::::
NP_001 EERQDPGSAPSPLSLLHPGVAAKGKHASEKRHKCPYSGCGKVYGKSSHLKAHYRVHTGER
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 PFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRFTRSDHLAKHARRHPGFHPD
:: : : : :::.:::::.::.:::::::.: :::: ::: :::::.:::::: :::.
NP_001 PFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFMRSDHLTKHARRHTEFHPS
180 190 200 210 220 230
220 230 240 250
pF1KB9 LLRRPGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL
...:
NP_001 MIKRSKKALANAL
240
>>NP_001027453 (OMIM: 601878) Krueppel-like factor 10 is (469 aa)
initn: 512 init1: 512 opt: 542 Z-score: 249.2 bits: 54.6 E(85289): 3.8e-07
Smith-Waterman score: 542; 46.9% identity (73.5% similar) in 162 aa overlap (53-209:280-440)
30 40 50 60 70
pF1KB9 AVVHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPP---PPAASGPGPGAAAAPHLL
:.:: :: ::.. .: ..
NP_001 AVSAGGVPPMPVICQMVPLPANNPVVTTVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFV
250 260 270 280 290 300
80 90 100 110 120 130
pF1KB9 AASILADLRGGPGAAPGGA--SPASSSSAASSPSSGRAPGAAPSAAAKSHRCPFPDCAKA
. . ... : ..:.:. :: . . . : ::.... :. .:: : : :.:.
NP_001 VPQPVVQSSKPPVVSPNGTRLSPIAPAPGFS-PSAAKVTPQIDSSRIRSHICSHPGCGKT
310 320 330 340 350 360
140 150 160 170 180 190
pF1KB9 YYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRFT
:.::::::.: ::::::.::.:.:.::...:::::::.::.:::::::.:.::.:..::
NP_001 YFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFM
370 380 390 400 410 420
200 210 220 230 240 250
pF1KB9 RSDHLAKHARRHPGFHPDLLRRPGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL
:::::.::::::
NP_001 RSDHLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
430 440 450 460
>>NP_005646 (OMIM: 601878) Krueppel-like factor 10 isofo (480 aa)
initn: 512 init1: 512 opt: 542 Z-score: 249.1 bits: 54.6 E(85289): 3.9e-07
Smith-Waterman score: 542; 46.9% identity (73.5% similar) in 162 aa overlap (53-209:291-451)
30 40 50 60 70
pF1KB9 AVVHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPP---PPAASGPGPGAAAAPHLL
:.:: :: ::.. .: ..
NP_005 AVSAGGVPPMPVICQMVPLPANNPVVTTVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFV
270 280 290 300 310 320
80 90 100 110 120 130
pF1KB9 AASILADLRGGPGAAPGGA--SPASSSSAASSPSSGRAPGAAPSAAAKSHRCPFPDCAKA
. . ... : ..:.:. :: . . . : ::.... :. .:: : : :.:.
NP_005 VPQPVVQSSKPPVVSPNGTRLSPIAPAPGFS-PSAAKVTPQIDSSRIRSHICSHPGCGKT
330 340 350 360 370
140 150 160 170 180 190
pF1KB9 YYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRFT
:.::::::.: ::::::.::.:.:.::...:::::::.::.:::::::.:.::.:..::
NP_005 YFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFM
380 390 400 410 420 430
200 210 220 230 240 250
pF1KB9 RSDHLAKHARRHPGFHPDLLRRPGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL
:::::.::::::
NP_005 RSDHLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
440 450 460 470 480
>>NP_001171189 (OMIM: 603301,610508) Krueppel-like facto (495 aa)
initn: 496 init1: 496 opt: 526 Z-score: 242.5 bits: 53.4 E(85289): 9.1e-07
Smith-Waterman score: 541; 45.0% identity (65.1% similar) in 218 aa overlap (29-234:287-494)
10 20 30 40 50
pF1KB9 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPE-GAGPAAGLDVRAARREAASPGTPG
.: :. ..: . . ..:: : .: :
NP_001 PLISVSVPAPPVLCQMIPVTGQSSMLPAFLKPPPQLSVGTVRPILAQAA--PAPQPVFVG
260 270 280 290 300 310
60 70 80 90 100 110
pF1KB9 PPPPPPAASGPGP-GAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSGRAP
: : :. : :: : ::...: :. : . .:. .: :.. .:
NP_001 PAVPQGAVMLVLPQGALPPPAPCAANVMAA--GNTKLLPLAPAPVFITS-----SQNCVP
320 330 340 350 360
120 130 140 150 160 170
pF1KB9 GAAPSAAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELAR
. : ... : :: : :.:.::::::.::::::::.:: :.:.::::::::::::.:
NP_001 QVDFSRR-RNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSR
370 380 390 400 410 420
180 190 200 210 220
pF1KB9 HHRTHTGEKRFSCPLCSKRFTRSDHLAKHARRH------PGFHPD---LLRRPGARST-S
:.:::::::.: ::.:..:: :::::.:::::: ::.. . : : .:.: :
NP_001 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIASAESPGS
430 440 450 460 470 480
230 240 250
pF1KB9 PSDSLPCSLAGSPAPSPAPSPAPAGL
: :.: :
NP_001 PLVSMPASA
490
>>NP_001171187 (OMIM: 603301,610508) Krueppel-like facto (495 aa)
initn: 496 init1: 496 opt: 526 Z-score: 242.5 bits: 53.4 E(85289): 9.1e-07
Smith-Waterman score: 541; 45.0% identity (65.1% similar) in 218 aa overlap (29-234:287-494)
10 20 30 40 50
pF1KB9 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPE-GAGPAAGLDVRAARREAASPGTPG
.: :. ..: . . ..:: : .: :
NP_001 PLISVSVPAPPVLCQMIPVTGQSSMLPAFLKPPPQLSVGTVRPILAQAA--PAPQPVFVG
260 270 280 290 300 310
60 70 80 90 100 110
pF1KB9 PPPPPPAASGPGP-GAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSGRAP
: : :. : :: : ::...: :. : . .:. .: :.. .:
NP_001 PAVPQGAVMLVLPQGALPPPAPCAANVMAA--GNTKLLPLAPAPVFITS-----SQNCVP
320 330 340 350 360
120 130 140 150 160 170
pF1KB9 GAAPSAAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELAR
. : ... : :: : :.:.::::::.::::::::.:: :.:.::::::::::::.:
NP_001 QVDFSRR-RNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSR
370 380 390 400 410 420
180 190 200 210 220
pF1KB9 HHRTHTGEKRFSCPLCSKRFTRSDHLAKHARRH------PGFHPD---LLRRPGARST-S
:.:::::::.: ::.:..:: :::::.:::::: ::.. . : : .:.: :
NP_001 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIASAESPGS
430 440 450 460 470 480
230 240 250
pF1KB9 PSDSLPCSLAGSPAPSPAPSPAPAGL
: :.: :
NP_001 PLVSMPASA
490
>>NP_003588 (OMIM: 603301,610508) Krueppel-like factor 1 (512 aa)
initn: 496 init1: 496 opt: 526 Z-score: 242.3 bits: 53.4 E(85289): 9.3e-07
Smith-Waterman score: 541; 45.0% identity (65.1% similar) in 218 aa overlap (29-234:304-511)
10 20 30 40 50
pF1KB9 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPE-GAGPAAGLDVRAARREAASPGTPG
.: :. ..: . . ..:: : .: :
NP_003 PLISVSVPAPPVLCQMIPVTGQSSMLPAFLKPPPQLSVGTVRPILAQAA--PAPQPVFVG
280 290 300 310 320 330
60 70 80 90 100 110
pF1KB9 PPPPPPAASGPGP-GAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSGRAP
: : :. : :: : ::...: :. : . .:. .: :.. .:
NP_003 PAVPQGAVMLVLPQGALPPPAPCAANVMAA--GNTKLLPLAPAPVFITS-----SQNCVP
340 350 360 370 380
120 130 140 150 160 170
pF1KB9 GAAPSAAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELAR
. : ... : :: : :.:.::::::.::::::::.:: :.:.::::::::::::.:
NP_003 QVDFSRR-RNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSR
390 400 410 420 430 440
180 190 200 210 220
pF1KB9 HHRTHTGEKRFSCPLCSKRFTRSDHLAKHARRH------PGFHPD---LLRRPGARST-S
:.:::::::.: ::.:..:: :::::.:::::: ::.. . : : .:.: :
NP_003 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIASAESPGS
450 460 470 480 490 500
230 240 250
pF1KB9 PSDSLPCSLAGSPAPSPAPSPAPAGL
: :.: :
NP_003 PLVSMPASA
510
>>NP_945194 (OMIM: 608306) transcription factor Sp8 isof (490 aa)
initn: 625 init1: 389 opt: 521 Z-score: 240.5 bits: 53.0 E(85289): 1.2e-06
Smith-Waterman score: 521; 44.5% identity (65.0% similar) in 200 aa overlap (53-245:285-475)
30 40 50 60 70 80
pF1KB9 AVVHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPPPPAASGPGPGAAAAPHLLAAS
: :: : :.:.: :.:. .:.:.
NP_945 YSGLSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPD----SAPSPLAGAGGSMLSAG
260 270 280 290 300 310
90 100 110 120 130
pF1KB9 ILADLRGGPGAAPGGASPASSSSAASSPSSGRAPGAAPSAAAKS----HRCPFPDCAKAY
: : :.: .. : :. .. . :. .: .:..:. : : .: :.:.:
NP_945 PSAPLGGSPRSS---ARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVY
320 330 340 350 360
140 150 160 170 180 190
pF1KB9 YKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRFTR
:.::::.::: :::::::.:.: : :.:.::::: :: :::::::::.::.:.::: :
NP_945 GKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMR
370 380 390 400 410 420
200 210 220 230 240 250
pF1KB9 SDHLAKHARRHPGFHP---DLLRRPGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL
::::.::.. : : . :... : .:: : :::: : .:
NP_945 SDHLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDS-EHSAAGSP-PCHSPELLQPPEPGH
430 440 450 460 470 480
NP_945 RNGLE
490
252 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:35:46 2016 done: Sun Nov 6 13:35:48 2016
Total Scan time: 9.170 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]