Result of FASTA (ccds) for
pFN21AB9597
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9597, 497 aa
1>>>pF1KB9597 497 - 497 aa - 497 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3841+/- 0.001; mu= 0.4092+/- 0.061
mean_var=475.5430+/-98.698, 0's: 0 Z-trim(117.8): 93 B-trim: 180 in 1/54
Lambda= 0.058814
statistics sampled from 18575 (18669) to 18575 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.573), width: 16
Scan time: 2.920
The best scores are: opt bits E(32554)
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 3466 308.1 1.4e-83
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 1054 103.4 5.5e-22
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 840 85.3 1.6e-16
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 806 82.3 1.1e-15
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 780 80.1 5.1e-15
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 778 80.0 5.7e-15
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 774 79.6 7.3e-15
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 773 79.5 7.7e-15
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 766 79.0 1.2e-14
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 737 76.4 6e-14
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 701 73.3 4.5e-13
CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 666 70.5 4.3e-12
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 641 68.5 2.2e-11
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 618 66.3 6.6e-11
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 2279 init1: 2234 opt: 3466 Z-score: 1614.0 bits: 308.1 E(32554): 1.4e-83
Smith-Waterman score: 3466; 99.4% identity (99.4% similar) in 497 aa overlap (1-497:1-495)
10 20 30 40 50 60
pF1KB9 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHPHAFAFA
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS30 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHP--HAFAFA
250 260 270 280 290
310 320 330 340 350 360
pF1KB9 AAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGA
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB9 ELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIM
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 ELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIM
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB9 GHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLS
420 430 440 450 460 470
490
pF1KB9 SGSRFASKVAGLSGCHF
:::::::::::::::::
CCDS30 SGSRFASKVAGLSGCHF
480 490
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 953 init1: 822 opt: 1054 Z-score: 508.2 bits: 103.4 E(32554): 5.5e-22
Smith-Waterman score: 1100; 45.8% identity (62.3% similar) in 509 aa overlap (11-495:3-465)
10 20 30 40 50
pF1KB9 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGG----ELPARSGPRAPRDVLPHGH
.:.: : :. ..:::::: : : ..: .:: ..: .
CCDS75 MTLSTEMSDASGLAEETDIDVVGEGEDEEDEEEEDDDEGGGGGPRLAVPAQR
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 EPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPS
. .. .. .::: :. . . : . :... . :::. ::. ::.: : : .
CCDS75 R---RRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAAGAGAGGGGGGGGA
60 70 80 90 100
120 130 140 150 160 170
pF1KB9 GGAAT-----RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAW
::... ..::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GGGGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAW
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB9 QNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS75 QNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPP
170 180 190 200 210 220
240 250 260 270
pF1KB9 HPHPHPHPELLLRGGAAA--AGDPGA----FLPGFA------AYGAYGYGYGLALPAYGA
. :::::..:: ::::.: : :. .:: :: :::: :: : :
CCDS75 NAAAAES--LLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPY-A
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB9 PPPGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAP
:: . : : ::::::: : :: ::: .:. .: .. . :
CCDS75 PPSAL----------FAAAAAAAAAAAFHPHSPPP-----PPPPHGAAAELARTAFGYRP
290 300 310 320 330
340 350 360 370 380 390
pF1KB9 APASGSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAGG
: ... ::: ::. : :. . : : : :. .:. . :.: :..
CCDS75 HPLGAALPGPLPAS-AAKAGGPGASALARSPFSIESIIGGSLG--PAA---------AAA
340 350 360 370
400 410 420 430 440 450
pF1KB9 GAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQ-AQVLAMLT
.:. ..:.: :: : ::::. : .. : ::.::.. .. :. .
CCDS75 AAAQAAAAAQASPSPS---------PVAAPPAPGSSGGGCAAQAAVGPAAALTRSLVAAA
380 390 400 410 420 430
460 470 480 490
pF1KB9 APALAPVAGHIRLS--HPGDALLSSGSRFASKVAGLSGCHF
: : . :.. :. : : :: :: :.... :.:
CCDS75 AAAASSVSSSAALGTLHQGTAL-SSVENFTARI---SNC
440 450 460
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 903 init1: 740 opt: 840 Z-score: 410.0 bits: 85.3 E(32554): 1.6e-16
Smith-Waterman score: 966; 42.9% identity (57.5% similar) in 487 aa overlap (12-474:10-434)
10 20 30 40
pF1KB9 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGE-------LPARSGPRAPR----
:. :. ..:. :.:::::: :. : : . .:: :
CCDS62 MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEA
10 20 30 40 50
50 60 70 80 90 100
pF1KB9 DVLP-----HGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAA
: .: ::. : .. : .. .:. :. :: : : : ..
CCDS62 DEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDV------GAPEADGCKGGVGGEE
60 70 80 90 100 110
110 120 130 140 150
pF1KB9 RGAAGPGPGPPSGGAATRSP------LVKPPYSYIALITMAILQSPKKRLTLSEICEFIS
::.: ::: ::.:. .: ::::::::::::::::::::.:.:::: ::::::
CCDS62 GGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFIS
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 GRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLR
.::::::::::::::::::::::::::::::::::::::::::::::.: ::::::::::
CCDS62 NRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLR
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB9 RRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYG
:::::::. . : . . :.... .: . .: .: : :: :::
CCDS62 RRKRFKRHQ----QEHLREQTALMMQSFGAYSLAAAA-----GAAGPYGRPYGLH-----
240 250 260 270
280 290 300 310 320 330
pF1KB9 APPPGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPA
:: . :: : : :::::: ..:: . :: : : :
CCDS62 -----PAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPS-----GELGR
280 290 300 310 320
340 350 360 370 380 390
pF1KB9 PAPASGSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAG
: : :: ::: : :.. :: : : :. . ::::.:.: .:.. .
CCDS62 KAAAFGSQLGPG---LQLQLNS-LGAAAA---AAGTAGAAGTTASL--------IKSEPS
330 340 350 360 370
400 410 420 430 440 450
pF1KB9 GGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGA--GEGSPGPPFAAAAGPGGQAQVLAM
. ::::::..:.: :: ::: :. : : : ...: :: . . ..
CCDS62 A-----------RPSFSIENIIG--GGPAAPGGSAVGAGVAG----GTGGSGGGSTAQSF
380 390 400 410
460 470 480 490
pF1KB9 LTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF
: :. . :. . .:
CCDS62 LRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWP
420 430 440 450 460 470
>>CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 (408 aa)
initn: 788 init1: 692 opt: 806 Z-score: 395.1 bits: 82.3 E(32554): 1.1e-15
Smith-Waterman score: 832; 45.0% identity (57.7% similar) in 409 aa overlap (38-407:7-394)
10 20 30 40 50 60
pF1KB9 CEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGP-RAPRDVLPHGHEPP----AEE
: : :: : :. :: :.. .::
CCDS21 MNLPRAERP-RSTPQRSLRD--SDGEDGKIDVLGEE
10 20 30
70 80 90 100 110
pF1KB9 AEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG--------
. : .::::: .. . : . .: .: : : ::. :.
CCDS21 EDEDEVEDEEEEASQKFLEQSLQPGLQVARWGGVALPREHIEGG--GPSDPSEFGTEFRA
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB9 PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPA
:: ..::. :.: .::::::::::::::::::.:::::: :: ::::::::::.::::
CCDS21 PPRSAAASEDARQP-AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPA
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 WQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP
:::::::::::::::::::::::.::::.::.::: : :::::::::::::::::. : :
CCDS21 WQNSIRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP
160 170 180 190 200 210
240 250 260 270 280
pF1KB9 PHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPH
::: : : .. :: .: :: :: . : :. :: : :: :.
CCDS21 GAHLPHPFP---LPAAHAALHNPR---PG-PLLGAPA----LPQPVPGAYPNTAPGRRPY
220 230 240 250
290 300 310 320 330
pF1KB9 PHPHPHPHAFAF--AAAAAAAPCQLS----VPPGRAAAPPP--GPPTASVFAGAGSAPAP
:::: . . : : :.:: . . :: . : :: : .: :.
CCDS21 ALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQPSLGPQPWEEGKGLASPPGG
260 270 280 290 300 310
340 350 360 370 380
pF1KB9 APAS-----------GSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTAL
. : :.: : . . :. : : :.::: :.:::. .
CCDS21 GCISFSIESIMQGVRGAGTGAAQSLSPT---AWSYCPLLQRPSSLSDNFAATAAA-SGGG
320 330 340 350 360 370
390 400 410 420 430 440
pF1KB9 LRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPG
::: :.. : ::: . .:
CCDS21 LRQRLRSHQGRGAGRAPVGRVGAAAVSGGGRGL
380 390 400
>>CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 (416 aa)
initn: 783 init1: 701 opt: 780 Z-score: 383.1 bits: 80.1 E(32554): 5.1e-15
Smith-Waterman score: 787; 49.5% identity (62.9% similar) in 307 aa overlap (38-324:7-297)
10 20 30 40 50 60
pF1KB9 CEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGP-RAPRDVLPHGHEPP----AEE
: : :: : :. :: :.. .::
CCDS47 MNLPRAERP-RSTPQRSLRD--SDGEDGKIDVLGEE
10 20 30
70 80 90 100 110
pF1KB9 AEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG--------
. : .::::: . . : . .: .: : .:..::. :.
CCDS47 EDEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALP-REHIEGGGGPSDPSEFGTKFRA
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB9 PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPA
:: ..::. :.: .::::::::::::::::.:.:::::: :: ::::::::::.::::
CCDS47 PPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPA
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 WQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP
:::::::::::::::::::::::.:::::::.::: : :::::::::::::::::. : :
CCDS47 WQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP
160 170 180 190 200 210
240 250 260 270 280
pF1KB9 PHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPH
::: : : .. :: .: :: :: . :. :: : :: :.
CCDS47 GAHLPHPFP---LPAAHAALHNPH---PG-PLLGAPAPPQ----PVPGAYPNTAPGRCPY
220 230 240 250 260
290 300 310 320 330 340
pF1KB9 PHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGP
:::: . . .: . : .. . :.: : :
CCDS47 ALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREA
270 280 290 300 310 320
350 360 370 380 390 400
pF1KB9 GPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAG
CCDS47 DASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLL
330 340 350 360 370 380
>>CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 (416 aa)
initn: 782 init1: 701 opt: 778 Z-score: 382.2 bits: 80.0 E(32554): 5.7e-15
Smith-Waterman score: 785; 49.5% identity (62.9% similar) in 307 aa overlap (38-324:7-297)
10 20 30 40 50 60
pF1KB9 CEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGP-RAPRDVLPHGHEPP----AEE
: : :: : :. :: :.. .::
CCDS75 MNLPRAERP-RSTPQRSLRD--SDGEDGKIDVLGEE
10 20 30
70 80 90 100 110
pF1KB9 AEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG--------
. : .::::: . . : . .: .: : .:..::. :.
CCDS75 EDEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALP-REHIEGGGGPSDPSEFGTKFRA
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB9 PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPA
:: ..::. :.: .::::::::::::::::.:.:::::: :: ::::::::::.::::
CCDS75 PPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPA
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 WQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP
:::::::::::::::::::::::.:::::::.::: : :::::::::::::::::. : :
CCDS75 WQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP
160 170 180 190 200 210
240 250 260 270 280
pF1KB9 PHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPH
::: : : .. :: .: :: :: . :. :: : :: :.
CCDS75 GAHLPHPFP---LPAAHAALHNPH---PG-PLLGAPAPPQ----PVPGAYPNTAPGRRPY
220 230 240 250 260
290 300 310 320 330 340
pF1KB9 PHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGP
:::: . . .: . : .. . :.: : :
CCDS75 ALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREA
270 280 290 300 310 320
350 360 370 380 390 400
pF1KB9 GPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAG
CCDS75 DASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLL
330 340 350 360 370 380
>>CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 (417 aa)
initn: 777 init1: 695 opt: 774 Z-score: 380.4 bits: 79.6 E(32554): 7.3e-15
Smith-Waterman score: 790; 51.3% identity (65.2% similar) in 279 aa overlap (61-324:32-297)
40 50 60 70 80 90
pF1KB9 GGGSGGGELPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGA
:: . : .:::::... . : . .
CCDS43 NLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQV
10 20 30 40 50 60
100 110 120 130
pF1KB9 AAAAGSPGPGAAAARGAAGPG-PG--------PPSGGAAT---RSPLVKPPYSYIALITM
: .: : .:..::. :. :: ..::. :.: .::::::::::::
CCDS43 ARWGGVALP-REHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQP-AKPPYSYIALITM
70 80 90 100 110
140 150 160 170 180 190
pF1KB9 AILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKG
::::.:.:::::: :: ::::::::::.:::::::::::::::::::::::::::.::::
CCDS43 AILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKG
120 130 140 150 160 170
200 210 220 230 240 250
pF1KB9 NYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLP
:::.::: : :::::::::::::::::. : : ::: : : .. :: .: :
CCDS43 NYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFP---LPAAHAALHNPH---P
180 190 200 210 220 230
260 270 280 290 300 310
pF1KB9 GFAAYGAYGYGYGLALPAYGAPP---PGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPG
: :: . :. :: : :: :. :::: . . .: . : .. .
CCDS43 G-PLLGAPAPPQ----PVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGA
240 250 260 270 280
320 330 340 350 360 370
pF1KB9 RAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYPASLSP
:.: : :
CCDS43 ALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRP
290 300 310 320 330 340
>>CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 (417 aa)
initn: 746 init1: 695 opt: 773 Z-score: 379.9 bits: 79.5 E(32554): 7.7e-15
Smith-Waterman score: 789; 51.3% identity (65.2% similar) in 279 aa overlap (61-324:32-297)
40 50 60 70 80 90
pF1KB9 GGGSGGGELPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGA
:: . : .:::::... . : . .
CCDS43 NLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQV
10 20 30 40 50 60
100 110 120 130
pF1KB9 AAAAGSPGPGAAAARGAAGPG-PG--------PPSGGAAT---RSPLVKPPYSYIALITM
: .: : .:..::. :. :: ..::. :.: .::::::::::::
CCDS43 ARWGGVALP-REHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQP-AKPPYSYIALITM
70 80 90 100 110
140 150 160 170 180 190
pF1KB9 AILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKG
::::.:.:::::: :: ::::::::::.:::::::::::::::::::::::::::.::::
CCDS43 AILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKG
120 130 140 150 160 170
200 210 220 230 240 250
pF1KB9 NYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLP
:::.::: : :::::::::::::::::. : : ::: : : .. :: .: :
CCDS43 NYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFP---LPAAHAALHNPR---P
180 190 200 210 220 230
260 270 280 290 300 310
pF1KB9 GFAAYGAYGYGYGLALPAYGAPP---PGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPG
: :: . :. :: : :: :. :::: . . .: . : .. .
CCDS43 G-PLLGAPAPPQ----PVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGA
240 250 260 270 280
320 330 340 350 360 370
pF1KB9 RAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYPASLSP
:.: : :
CCDS43 ALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRP
290 300 310 320 330 340
>>CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 (439 aa)
initn: 731 init1: 671 opt: 766 Z-score: 376.4 bits: 79.0 E(32554): 1.2e-14
Smith-Waterman score: 772; 40.5% identity (55.3% similar) in 452 aa overlap (42-452:10-434)
20 30 40 50 60 70
pF1KB9 SSESSPAALSEADADIDVVGGGSGGGELPARSGP-RAPRDVLPHGHEPPAEEAEADLAED
:: : :. :: :.. . . ::
CCDS34 MNLPRAERLRSTPQRSLRD--SDGEDGKIDVLGEEEDED
10 20 30
80 90 100 110 120
pF1KB9 EEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG--------PPSGGAAT
:::... . : . .: .: : .:..::. :. :: ..::.
CCDS34 EEEAASQQFLEQSLQPGLQVARWGGVALP-REHIEGGGGPSDPSEFGTEFRAPPRSAAAS
40 50 60 70 80 90
130 140 150 160 170
pF1KB9 ---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHN
:.: .::: ::::::::::::::.:::::: :: ::: ::::::.::::::::::::
CCDS34 EDARQP-AKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHN
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 LSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR-QPLPPPH-PHPH
::::::::::::::: :::::::.::: : :::::::::::::::.: :: : : :::
CCDS34 LSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPF
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB9 PHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPHPHPHPH
: : .. :: .: :: :: . :. :: : :: :. :::
CCDS34 PLP-----AAHAALHNPR---PG-PLLGAPAPPQ----PVPGAYPNTGPGRRPYALLHPH
220 230 240 250 260
300 310 320 330 340
pF1KB9 PHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP---P--------TASVFAGAGSAPAPAPA
: . . .: : : .. . :.: : : : : :. : : :
CCDS34 PPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSA
270 280 290 300 310 320
350 360 370 380 390
pF1KB9 ---SGSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTD---
: .: : :: : . : . . : .. . : : .: . .
CCDS34 LRVSCKGSGERVQGLRRV------CPR---PRGATAPCSSDRQACRTILQQQQRHQEEDC
330 340 350 360 370
400 410 420 430 440 450
pF1KB9 AGGGAGGGGAGAGQRPSFSID----HIMGHGGG--GAAPPGAGEGSPGPPFAAAAGPGGQ
:.: : :: : . : . . ...:.: . : : .:::. .: : .. :..
CCDS34 ANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGGEGT-SPVFLVSPTPSSL
380 390 400 410 420 430
460 470 480 490
pF1KB9 AQVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF
:.
CCDS34 AESAGPS
>>CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 (373 aa)
initn: 583 init1: 535 opt: 737 Z-score: 363.9 bits: 76.4 E(32554): 6e-14
Smith-Waterman score: 753; 41.3% identity (59.7% similar) in 390 aa overlap (73-425:4-365)
50 60 70 80 90
pF1KB9 SGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALAS----RGAAAAAGSPG
::: .:..::. :: .:: :.
CCDS35 MTAESGP-PPPQPEVLATVKEERGETAA-GAGV
10 20 30
100 110 120 130 140 150
pF1KB9 PGAAAARGAAGPGPGPPSGGAATRSPLV--KPPYSYIALITMAILQSPKKRLTLSEICEF
:: :..::: :: . :: ::::::::::.::: ..:..::::. : .:
CCDS35 PGEATGRGA---------GGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKF
40 50 60 70 80
160 170 180 190 200 210
pF1KB9 ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSF
:. :::.::.. :::::::::.:::::.::::: : :::::::.:::.. :::..:::
CCDS35 ITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSF
90 100 110 120 130 140
220 230 240 250 260 270
pF1KB9 LRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA
:::::::::. : .: . : ..::::. .:..:: : : : :. :
CCDS35 LRRRKRFKRSDLST-YP-AYMHDAAAAAAAAAAAAAAAAIFPG--AVPAARPPYPGAVYA
150 160 170 180 190
280 290 300 310 320 330
pF1KB9 YGAPPPGPAPHPHPHPHPHAFAFAAAAAAAPCQL-SVPPGRAAAP-----PPGPPTASVF
::: :: : .: ::. .::.. .. : : .: : :: . .:
CCDS35 GYAPPSLAAPPPVYYP---------AASPGPCRVFGLVPERPLSPELGPAPSGPGGSCAF
200 210 220 230 240
340 350 360 370
pF1KB9 AGAGSAPA------PAPASGSGPGPGPAGLPAFLGAE----LGCAKAFYPAS------LS
:.:: ::: :: .:. :. : :. : . : ..:.. :. :
CCDS35 ASAG-APATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSAIFAAAGRLAGPAS
250 260 270 280 290 300
380 390 400 410 420
pF1KB9 PPAAGTAAGLPTALLRQGLKTDAGGGA-------GG--GGAGAGQRPSFSIDHIMGHGGG
:::.:...:. :.. : . . :: :: :::.:: .. : .. ::
CCDS35 PPAGGSSGGVETTVDFYGRTSPGQFGALGACYNPGGQLGGASAG---AYHARHAAAYPGG
310 320 330 340 350 360
430 440 450 460 470 480
pF1KB9 GAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRF
CCDS35 IDRFVSAM
370
497 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:55:24 2016 done: Tue Nov 8 04:55:25 2016
Total Scan time: 2.920 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]