Result of FASTA (omim) for
pFN21AB9441
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9441, 582 aa
1>>>pF1KB9441 582 - 582 aa - 582 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.1463+/-0.000463; mu= -14.8985+/- 0.028
mean_var=313.6586+/-65.879, 0's: 0 Z-trim(118.3): 23 B-trim: 493 in 2/59
Lambda= 0.072418
statistics sampled from 31176 (31199) to 31176 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.366), width: 16
Scan time: 10.090
The best scores are: opt bits E(85289)
NP_060873 (OMIM: 607010) mRNA-decapping enzyme 1A ( 582) 3773 408.3 3.5e-113
NP_001277134 (OMIM: 607010) mRNA-decapping enzyme ( 510) 3101 338.1 4.2e-92
NP_001277135 (OMIM: 607010) mRNA-decapping enzyme ( 461) 2958 323.1 1.2e-87
NP_001277133 (OMIM: 607010) mRNA-decapping enzyme ( 544) 2414 266.3 1.8e-70
NP_001277136 (OMIM: 607010) mRNA-decapping enzyme ( 423) 2409 265.8 2.1e-70
NP_689853 (OMIM: 609843) mRNA-decapping enzyme 1B ( 617) 701 87.4 1.5e-16
NP_001306221 (OMIM: 609843) mRNA-decapping enzyme ( 153) 455 61.4 2.4e-09
>>NP_060873 (OMIM: 607010) mRNA-decapping enzyme 1A isof (582 aa)
initn: 3773 init1: 3773 opt: 3773 Z-score: 2153.0 bits: 408.3 E(85289): 3.5e-113
Smith-Waterman score: 3773; 100.0% identity (100.0% similar) in 582 aa overlap (1-582:1-582)
10 20 30 40 50 60
pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI
490 500 510 520 530 540
550 560 570 580
pF1KB9 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
::::::::::::::::::::::::::::::::::::::::::
NP_060 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
550 560 570 580
>>NP_001277134 (OMIM: 607010) mRNA-decapping enzyme 1A i (510 aa)
initn: 3098 init1: 3098 opt: 3101 Z-score: 1774.4 bits: 338.1 E(85289): 4.2e-92
Smith-Waterman score: 3101; 98.4% identity (99.0% similar) in 491 aa overlap (96-582:20-510)
70 80 90 100 110 120
pF1KB9 GFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNA----SLSIYSIWFYDKNDCHRIAKL
:.:: ..:::::::::::::::::::
NP_001 MNHFFCIEMQAVEKTRGSELFRNLLEIRKVSIYSIWFYDKNDCHRIAKL
10 20 30 40
130 140 150 160 170 180
pF1KB9 MADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISSP
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB9 GLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSEE
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB9 MERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASITQ
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB9 SNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPVP
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB9 ELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVASF
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB9 SPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSSA
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB9 IPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSII
410 420 430 440 450 460
550 560 570 580
pF1KB9 LSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
:::::::::::::::::::::::::::::::::::::::::
NP_001 LSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
470 480 490 500 510
>>NP_001277135 (OMIM: 607010) mRNA-decapping enzyme 1A i (461 aa)
initn: 2958 init1: 2958 opt: 2958 Z-score: 1694.4 bits: 323.1 E(85289): 1.2e-87
Smith-Waterman score: 2958; 100.0% identity (100.0% similar) in 461 aa overlap (122-582:1-461)
100 110 120 130 140 150
pF1KB9 EPFLLYRNASLSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSD
::::::::::::::::::::::::::::::
NP_001 MADVVEEETRRSQQAARDKQSPSQANGCSD
10 20 30
160 170 180 190 200 210
pF1KB9 HRPIDILEMLSRAKDEYERNQMGDSNISSPGLQPSTQLSNLGSTETLEEMPSGSQDKSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRPIDILEMLSRAKDEYERNQMGDSNISSPGLQPSTQLSNLGSTETLEEMPSGSQDKSAP
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB9 SGHKHLTVEELFGTSLPKEQPAVVGLDSEEMERLPGDASQKEPNSFLPFPFEQLGGAPQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGHKHLTVEELFGTSLPKEQPAVVGLDSEEMERLPGDASQKEPNSFLPFPFEQLGGAPQS
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB9 ETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSPVLSPTLPAEAPTAQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSPVLSPTLPAEAPTAQV
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB9 PPSLPRNSTMMQAVKTTPRQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTAGTSLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPSLPRNSTMMQAVKTTPRQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTAGTSLPS
220 230 240 250 260 270
400 410 420 430 440 450
pF1KB9 VDLLQKLRLTPQHDQIQTQPLGKGAMVASFSPAAGQLATPESFIEPPSKTAAARVAASAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDLLQKLRLTPQHDQIQTQPLGKGAMVASFSPAAGQLATPESFIEPPSKTAAARVAASAS
280 290 300 310 320 330
460 470 480 490 500 510
pF1KB9 LSNMVLAPLQSMQQNQDPEVFVQPKVLSSAIPVAGAPLVTATTTAVSSVLLAPSVFQQTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSNMVLAPLQSMQQNQDPEVFVQPKVLSSAIPVAGAPLVTATTTAVSSVLLAPSVFQQTV
340 350 360 370 380 390
520 530 540 550 560 570
pF1KB9 TRSSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRSSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQ
400 410 420 430 440 450
580
pF1KB9 VLTKNKDNHNL
:::::::::::
NP_001 VLTKNKDNHNL
460
>>NP_001277133 (OMIM: 607010) mRNA-decapping enzyme 1A i (544 aa)
initn: 2395 init1: 2395 opt: 2414 Z-score: 1386.1 bits: 266.3 E(85289): 1.8e-70
Smith-Waterman score: 3442; 93.5% identity (93.5% similar) in 582 aa overlap (1-582:1-544)
10 20 30 40 50 60
pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYER----------
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE
::::::::::::::::::::::::::::::::
NP_001 ----------------------------SAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE
180 190 200
250 260 270 280 290 300
pF1KB9 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB9 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB9 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB9 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB9 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI
450 460 470 480 490 500
550 560 570 580
pF1KB9 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
::::::::::::::::::::::::::::::::::::::::::
NP_001 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
510 520 530 540
>>NP_001277136 (OMIM: 607010) mRNA-decapping enzyme 1A i (423 aa)
initn: 2395 init1: 2395 opt: 2409 Z-score: 1385.0 bits: 265.8 E(85289): 2.1e-70
Smith-Waterman score: 2627; 91.8% identity (91.8% similar) in 461 aa overlap (122-582:1-423)
100 110 120 130 140 150
pF1KB9 EPFLLYRNASLSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSD
::::::::::::::::::::::::::::::
NP_001 MADVVEEETRRSQQAARDKQSPSQANGCSD
10 20 30
160 170 180 190 200 210
pF1KB9 HRPIDILEMLSRAKDEYERNQMGDSNISSPGLQPSTQLSNLGSTETLEEMPSGSQDKSAP
::::::::::::::::::: :::
NP_001 HRPIDILEMLSRAKDEYER--------------------------------------SAP
40 50
220 230 240 250 260 270
pF1KB9 SGHKHLTVEELFGTSLPKEQPAVVGLDSEEMERLPGDASQKEPNSFLPFPFEQLGGAPQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGHKHLTVEELFGTSLPKEQPAVVGLDSEEMERLPGDASQKEPNSFLPFPFEQLGGAPQS
60 70 80 90 100 110
280 290 300 310 320 330
pF1KB9 ETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSPVLSPTLPAEAPTAQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSPVLSPTLPAEAPTAQV
120 130 140 150 160 170
340 350 360 370 380 390
pF1KB9 PPSLPRNSTMMQAVKTTPRQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTAGTSLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPSLPRNSTMMQAVKTTPRQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTAGTSLPS
180 190 200 210 220 230
400 410 420 430 440 450
pF1KB9 VDLLQKLRLTPQHDQIQTQPLGKGAMVASFSPAAGQLATPESFIEPPSKTAAARVAASAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDLLQKLRLTPQHDQIQTQPLGKGAMVASFSPAAGQLATPESFIEPPSKTAAARVAASAS
240 250 260 270 280 290
460 470 480 490 500 510
pF1KB9 LSNMVLAPLQSMQQNQDPEVFVQPKVLSSAIPVAGAPLVTATTTAVSSVLLAPSVFQQTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSNMVLAPLQSMQQNQDPEVFVQPKVLSSAIPVAGAPLVTATTTAVSSVLLAPSVFQQTV
300 310 320 330 340 350
520 530 540 550 560 570
pF1KB9 TRSSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRSSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQ
360 370 380 390 400 410
580
pF1KB9 VLTKNKDNHNL
:::::::::::
NP_001 VLTKNKDNHNL
420
>>NP_689853 (OMIM: 609843) mRNA-decapping enzyme 1B isof (617 aa)
initn: 831 init1: 594 opt: 701 Z-score: 418.0 bits: 87.4 E(85289): 1.5e-16
Smith-Waterman score: 817; 33.3% identity (59.0% similar) in 630 aa overlap (8-575:13-610)
10 20 30 40 50
pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLF
:...:::::..:::::. :.:...::::::: .::.:::::.:::::
NP_689 MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDC
:: ::::: :::::.:::.:.: .::..:::.:::..:::::::: ::::.::::::..:
NP_689 VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 HRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGD
.:::.:: .... : ...:.. :: :. .. . .:::.:: .::::: . .
NP_689 QRIAELMKNLTQYEQLKAHQGTGAGISPVILNS-GEGKEVDILRMLIKAKDEYTKCK---
130 140 150 160 170
180 190 200 210 220
pF1KB9 SNISSPGLQPSTQ--LSNLGSTETLEEMPSGSQDKSAPSGHK-------HLTVEELFGTS
. : : :.. .: . . . :: .:.. :. .. ::.. ::: .
NP_689 -TCSEPKKITSSSAIYDNPNLIKPIPVKPSENQQQRIPQPNQTLDPEPQHLSLTALFGKQ
180 190 200 210 220 230
230 240 250 260
pF1KB9 LPK------EQPAVVGLDSEEM----ERLP---G---DASQKEPNSFLPFPFE-QLGGAP
: : .. ..... :.:: : . : .:: : :.: :: :
NP_689 DKATCQETVEPPQTLHQQQQQQQQQQEKLPIRQGVVRSLSYEEPRRHSP-PIEKQL--CP
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB9 QSETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSPVLSPTLPAEAPTA
. : : :: : :. : . : . . . .:: .: : . :.
NP_689 AIQKLMVRSADLH--------PLSELPENRPCENGSTHSAGEFFTGPV-QPGSPHNIGTS
300 310 320 330 340
330 340 350 360 370 380
pF1KB9 QVPPSLPRNSTMMQAVKTTP---RQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTA-
. . :...... ...:: . .: . :.: : :.: :.: ::: .:: .:
NP_689 RGVQNASRTQNLFEKLQSTPGAANKCDP--STPAPA-SSAAL--NRS--RAPTSVTPVAP
350 360 370 380 390
390 400 410 420 430
pF1KB9 --GTSLPSVDLLQKLRLTPQ------HDQIQ-TQPLGKGAMVASFSPAAGQLATPE----
: . : .. : :: : . : : : . .: . ..: .. :
NP_689 GKGLAQPPQAYFNG-SLPPQTVGHQAHGREQSTLPRQTLPISGSQTGSSGVISPQELLKK
400 410 420 430 440 450
440 450 460 470 480
pF1KB9 -SFIEPPSKT-AAARVAASASLSNMVLA-----PLQSMQQNQDPEVFVQPKVLSSAIPVA
.... .. :. : : .:.. .. . ::.: :. :.. : ... :
NP_689 LQIVQQEQQLHASNRPALAAKFPVLAQSSGTGKPLESWI-NKTPNTEQQTPLFQVISP-Q
460 470 480 490 500 510
490 500 510 520 530
pF1KB9 GAPLVTATTTAVSSVLLAPSVFQQTVT-----RSSDLERKASSPSP---LTIGTPESQRK
: .::. :.:..: :: : .. : : : ... : .. : .. .
NP_689 RIP-----ATAAPSLLMSPMVFAQPTSVPPKERESGLLPVGGQEPPAAATSLLLPIQSPE
520 530 540 550 560
540 550 560 570 580
pF1KB9 PSII----LSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
::.: :.: :::..:..::.::..::. ..:.:: .:.
NP_689 PSVITSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAMKKTM
570 580 590 600 610
>>NP_001306221 (OMIM: 609843) mRNA-decapping enzyme 1B i (153 aa)
initn: 455 init1: 455 opt: 455 Z-score: 288.7 bits: 61.4 E(85289): 2.4e-09
Smith-Waterman score: 455; 69.9% identity (93.5% similar) in 93 aa overlap (8-100:13-105)
10 20 30 40 50
pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLF
:...:::::..:::::. :.:...::::::: .::.:::::.:::::
NP_001 MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDC
:: ::::: :::::.:::.:.: .::..:::.:::..::::::::
NP_001 VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARCESFLLQWVVLLLK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 HRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGD
NP_001 FGQVFKIVQCLPLCLHLVSVAMGGVSILTNVNV
130 140 150
582 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:13:52 2016 done: Mon Nov 7 02:13:53 2016
Total Scan time: 10.090 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]