Result of FASTA (ccds) for
pFN21AB9441
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9441, 582 aa
1>>>pF1KB9441 582 - 582 aa - 582 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.0822+/-0.00114; mu= -8.6574+/- 0.068
mean_var=255.2220+/-51.668, 0's: 0 Z-trim(110.4): 30 B-trim: 4 in 1/51
Lambda= 0.080281
statistics sampled from 11547 (11569) to 11547 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.355), width: 16
Scan time: 3.480
The best scores are: opt bits E(32554)
CCDS46847.2 DCP1A gene_id:55802|Hs108|chr3 ( 582) 3773 450.5 2.6e-126
CCDS74946.1 DCP1A gene_id:55802|Hs108|chr3 ( 544) 2414 293.1 6e-79
CCDS31727.1 DCP1B gene_id:196513|Hs108|chr12 ( 617) 701 94.7 3.6e-19
CCDS81651.1 DCP1B gene_id:196513|Hs108|chr12 ( 153) 455 66.0 3.9e-11
>>CCDS46847.2 DCP1A gene_id:55802|Hs108|chr3 (582 aa)
initn: 3773 init1: 3773 opt: 3773 Z-score: 2381.0 bits: 450.5 E(32554): 2.6e-126
Smith-Waterman score: 3773; 100.0% identity (100.0% similar) in 582 aa overlap (1-582:1-582)
10 20 30 40 50 60
pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI
490 500 510 520 530 540
550 560 570 580
pF1KB9 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
::::::::::::::::::::::::::::::::::::::::::
CCDS46 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
550 560 570 580
>>CCDS74946.1 DCP1A gene_id:55802|Hs108|chr3 (544 aa)
initn: 2395 init1: 2395 opt: 2414 Z-score: 1530.8 bits: 293.1 E(32554): 6e-79
Smith-Waterman score: 3442; 93.5% identity (93.5% similar) in 582 aa overlap (1-582:1-544)
10 20 30 40 50 60
pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYER----------
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE
::::::::::::::::::::::::::::::::
CCDS74 ----------------------------SAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE
180 190 200
250 260 270 280 290 300
pF1KB9 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB9 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB9 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB9 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB9 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI
450 460 470 480 490 500
550 560 570 580
pF1KB9 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
::::::::::::::::::::::::::::::::::::::::::
CCDS74 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
510 520 530 540
>>CCDS31727.1 DCP1B gene_id:196513|Hs108|chr12 (617 aa)
initn: 831 init1: 594 opt: 701 Z-score: 457.7 bits: 94.7 E(32554): 3.6e-19
Smith-Waterman score: 817; 33.3% identity (59.0% similar) in 630 aa overlap (8-575:13-610)
10 20 30 40 50
pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLF
:...:::::..:::::. :.:...::::::: .::.:::::.:::::
CCDS31 MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDC
:: ::::: :::::.:::.:.: .::..:::.:::..:::::::: ::::.::::::..:
CCDS31 VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 HRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGD
.:::.:: .... : ...:.. :: :. .. . .:::.:: .::::: . .
CCDS31 QRIAELMKNLTQYEQLKAHQGTGAGISPVILNS-GEGKEVDILRMLIKAKDEYTKCK---
130 140 150 160 170
180 190 200 210 220
pF1KB9 SNISSPGLQPSTQ--LSNLGSTETLEEMPSGSQDKSAPSGHK-------HLTVEELFGTS
. : : :.. .: . . . :: .:.. :. .. ::.. ::: .
CCDS31 -TCSEPKKITSSSAIYDNPNLIKPIPVKPSENQQQRIPQPNQTLDPEPQHLSLTALFGKQ
180 190 200 210 220 230
230 240 250 260
pF1KB9 LPK------EQPAVVGLDSEEM----ERLP---G---DASQKEPNSFLPFPFE-QLGGAP
: : .. ..... :.:: : . : .:: : :.: :: :
CCDS31 DKATCQETVEPPQTLHQQQQQQQQQQEKLPIRQGVVRSLSYEEPRRHSP-PIEKQL--CP
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB9 QSETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSPVLSPTLPAEAPTA
. : : :: : :. : . : . . . .:: .: : . :.
CCDS31 AIQKLMVRSADLH--------PLSELPENRPCENGSTHSAGEFFTGPV-QPGSPHNIGTS
300 310 320 330 340
330 340 350 360 370 380
pF1KB9 QVPPSLPRNSTMMQAVKTTP---RQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTA-
. . :...... ...:: . .: . :.: : :.: :.: ::: .:: .:
CCDS31 RGVQNASRTQNLFEKLQSTPGAANKCDP--STPAPA-SSAAL--NRS--RAPTSVTPVAP
350 360 370 380 390
390 400 410 420 430
pF1KB9 --GTSLPSVDLLQKLRLTPQ------HDQIQ-TQPLGKGAMVASFSPAAGQLATPE----
: . : .. : :: : . : : : . .: . ..: .. :
CCDS31 GKGLAQPPQAYFNG-SLPPQTVGHQAHGREQSTLPRQTLPISGSQTGSSGVISPQELLKK
400 410 420 430 440 450
440 450 460 470 480
pF1KB9 -SFIEPPSKT-AAARVAASASLSNMVLA-----PLQSMQQNQDPEVFVQPKVLSSAIPVA
.... .. :. : : .:.. .. . ::.: :. :.. : ... :
CCDS31 LQIVQQEQQLHASNRPALAAKFPVLAQSSGTGKPLESWI-NKTPNTEQQTPLFQVISP-Q
460 470 480 490 500 510
490 500 510 520 530
pF1KB9 GAPLVTATTTAVSSVLLAPSVFQQTVT-----RSSDLERKASSPSP---LTIGTPESQRK
: .::. :.:..: :: : .. : : : ... : .. : .. .
CCDS31 RIP-----ATAAPSLLMSPMVFAQPTSVPPKERESGLLPVGGQEPPAAATSLLLPIQSPE
520 530 540 550 560
540 550 560 570 580
pF1KB9 PSII----LSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL
::.: :.: :::..:..::.::..::. ..:.:: .:.
CCDS31 PSVITSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAMKKTM
570 580 590 600 610
>>CCDS81651.1 DCP1B gene_id:196513|Hs108|chr12 (153 aa)
initn: 455 init1: 455 opt: 455 Z-score: 313.4 bits: 66.0 E(32554): 3.9e-11
Smith-Waterman score: 455; 69.9% identity (93.5% similar) in 93 aa overlap (8-100:13-105)
10 20 30 40 50
pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLF
:...:::::..:::::. :.:...::::::: .::.:::::.:::::
CCDS81 MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDC
:: ::::: :::::.:::.:.: .::..:::.:::..::::::::
CCDS81 VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARCESFLLQWVVLLLK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 HRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGD
CCDS81 FGQVFKIVQCLPLCLHLVSVAMGGVSILTNVNV
130 140 150
582 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:13:51 2016 done: Mon Nov 7 02:13:52 2016
Total Scan time: 3.480 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]