Result of FASTA (omim) for
pFN21AB8957
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8957, 333 aa
1>>>pF1KB8957 333 - 333 aa - 333 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.9395+/-0.000398; mu= 2.9495+/- 0.025
mean_var=385.9223+/-77.463, 0's: 0 Z-trim(123.5): 152 B-trim: 0 in 0/54
Lambda= 0.065287
statistics sampled from 43277 (43508) to 43277 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.51), width: 16
Scan time: 6.120
The best scores are: opt bits E(85289)
NP_001418 (OMIM: 131310) homeobox protein engraile ( 333) 2291 229.2 9.7e-60
NP_001417 (OMIM: 131290) homeobox protein engraile ( 392) 774 86.4 1.1e-16
NP_005512 (OMIM: 186770) T-cell leukemia homeobox ( 330) 310 42.6 0.0014
NP_001182446 (OMIM: 186770) T-cell leukemia homeob ( 257) 302 41.7 0.0021
XP_011538046 (OMIM: 186770) PREDICTED: T-cell leuk ( 342) 297 41.4 0.0034
XP_011538047 (OMIM: 186770) PREDICTED: T-cell leuk ( 269) 289 40.5 0.005
NP_004088 (OMIM: 600034) homeobox protein EMX1 [Ho ( 290) 285 40.2 0.0067
NP_036608 (OMIM: 604295) ventral anterior homeobox ( 290) 284 40.1 0.0072
NP_005506 (OMIM: 142994,176450) motor neuron and p ( 401) 286 40.4 0.0076
NP_061975 (OMIM: 142952) homeobox protein Hox-A5 [ ( 270) 279 39.5 0.0095
>>NP_001418 (OMIM: 131310) homeobox protein engrailed-2 (333 aa)
initn: 2291 init1: 2291 opt: 2291 Z-score: 1193.5 bits: 229.2 E(85289): 9.7e-60
Smith-Waterman score: 2291; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB8 MEENDPKPGEAAAAVEGQRQPESSPGGGSGGGGGSSPGEADTGRRRALMLPAVLQAPGNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEENDPKPGEAAAAVEGQRQPESSPGGGSGGGGGSSPGEADTGRRRALMLPAVLQAPGNH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 QHPHRITNFFIDNILRPEFGRRKDAGTCCAGAGGGRGGGAGGEGGASGAEGGGGAGGSEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHPHRITNFFIDNILRPEFGRRKDAGTCCAGAGGGRGGGAGGEGGASGAEGGGGAGGSEQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LLGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPGGPLDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPGGPLDGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LKARGLGGGDLSVSSDSDSSQAGANLGAQPMLWPAWVYCTRYSDRPSSGPRSRKPKKKNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKARGLGGGDLSVSSDSDSSQAGANLGAQPMLWPAWVYCTRYSDRPSSGPRSRKPKKKNP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 NKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIK
250 260 270 280 290 300
310 320 330
pF1KB8 KATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
:::::::::::::::::::::::::::::::::
NP_001 KATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
310 320 330
>>NP_001417 (OMIM: 131290) homeobox protein engrailed-1 (392 aa)
initn: 897 init1: 740 opt: 774 Z-score: 420.6 bits: 86.4 E(85289): 1.1e-16
Smith-Waterman score: 891; 51.3% identity (67.3% similar) in 312 aa overlap (51-333:83-392)
30 40 50 60 70
pF1KB8 PESSPGGGSGGGGGSSPGEADTGRRRALMLPAVLQAPGNHQHP----HRITNFFIDNILR
: : ::... .: :: ::::::::::
NP_001 QPAPPSPPAAPCLPPLAHHPHLPPHPPPPPPQHLAAPAHQPQPAAQLHRTTNFFIDNILR
60 70 80 90 100 110
80 90 100 110 120 130
pF1KB8 PEFGRRKDAGTCCAGAGGGRGGGAGGEGGASGAEGGGGAGGSEQLLGSGSREPRQNPP-C
:.:: .:. .... ::::: :: . : :.: . . :.: : :
NP_001 PDFGCKKEQPPPQLLVAAAARGGAGG-GGRVERDRGQTAAGRDPVHPLGTRAPGAASLLC
120 130 140 150 160 170
140 150 160 170
pF1KB8 APGAGGPLPAAGSDSPGDGEGGSKTL------------------------SLHGGAKKGG
:: :. : ::. . : :.::. : ::. .::
NP_001 APDANCG-PPDGSQPAAAGAGASKAGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGSGG
180 190 200 210 220 230
180 190 200 210 220 230
pF1KB8 DPGGPLDGSLKARGLGGGDLSVSSDSDSSQAGANLGAQPMLWPAWVYCTRYSDRPSSGPR
:.: . : :. . . ...... . . . ::..:::::::::::::::::::
NP_001 GAGSPGAQGTKYPEHGNPAILLMGSANGGPVVKTDSQQPLVWPAWVYCTRYSDRPSSGPR
240 250 260 270 280 290
240 250 260 270 280 290
pF1KB8 SRKPKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIW
.:: :::. .:::::::::::::::::::::::.:::.::::::.:::::::::::::::
NP_001 TRKLKKKKNEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIW
300 310 320 330 340 350
300 310 320 330
pF1KB8 FQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
::::::::::::: :: ::.:::::::::::::. . :..::
NP_001 FQNKRAKIKKATGIKNGLALHLMAQGLYNHSTTTVQDKDESE
360 370 380 390
>>NP_005512 (OMIM: 186770) T-cell leukemia homeobox prot (330 aa)
initn: 348 init1: 170 opt: 310 Z-score: 185.2 bits: 42.6 E(85289): 0.0014
Smith-Waterman score: 320; 34.8% identity (60.4% similar) in 227 aa overlap (86-306:61-263)
60 70 80 90 100 110
pF1KB8 APGNHQHPHRITNFFIDNILRPEFGRRKDAGTCCA-GAGGGRGGGAGGEGGASGAEGGGG
:. : ::::. . :.:: :: .: ::::
NP_005 GGCMGPASRLQDGEYGLGCLVGGAYTYGGGGSAAATGAGGAGAYGTGGPGGPGGPAGGGG
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB8 AGGSEQLLGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPG
: . : :: : : :::: :..: : . ::. .:: : . :.
NP_005 ACSMGPLTGS------YNVNMAL-AGGPGPGGG----GGSSGGAGALSAAGVIRV---PA
100 110 120 130
180 190 200 210 220 230
pF1KB8 G-PLDGSL-KARGLGGGDLSVSSDSDSSQAGANLGAQPMLWPAWVYCTR-YS-DRPSSGP
:: :.. . . :. : .: : .. :.: . . .: :. .: :. :: .. :
NP_005 HRPLAGAVAHPQPLATGLPTVPSV--PAMPGVN-NLTGLTFP-WMESNRRYTKDRFTGHP
140 150 160 170 180 190
240 250 260 270 280
pF1KB8 -RSRKPKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIK
..: : :: :.:::.:: :. .:. .:. ..::. .: .::. :.....:.:
NP_005 YQNRTPPKK------KKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVK
200 210 220 230 240
290 300 310 320 330
pF1KB8 IWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
::::.:.: .. :...
NP_005 TWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVHNSSLFAL
250 260 270 280 290 300
>>NP_001182446 (OMIM: 186770) T-cell leukemia homeobox p (257 aa)
initn: 340 init1: 162 opt: 302 Z-score: 182.2 bits: 41.7 E(85289): 0.0021
Smith-Waterman score: 312; 35.3% identity (59.6% similar) in 218 aa overlap (86-298:61-255)
60 70 80 90 100 110
pF1KB8 APGNHQHPHRITNFFIDNILRPEFGRRKDAGTCCA-GAGGGRGGGAGGEGGASGAEGGGG
:. : ::::. . :.:: :: .: ::::
NP_001 GGCMGPASRLQDGEYGLGCLVGGAYTYGGGGSAAATGAGGAGAYGTGGPGGPGGPAGGGG
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB8 AGGSEQLLGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPG
: . : :: : : :::: :..: : . ::. .:: : . .
NP_001 ACSMGPLTGS------YNVNMAL-AGGPGPGGG----GGSSGGAGALSAAGVIRVPAHR-
100 110 120 130
180 190 200 210 220 230
pF1KB8 GPLDGSL-KARGLGGGDLSVSSDSDSSQAGANLGAQPMLWPAWVYCTR-YS-DRPSSGP-
:: :.. . . :. : .: : .. :.: . . .: :. .: :. :: .. :
NP_001 -PLAGAVAHPQPLATGLPTVPSVP--AMPGVN-NLTGLTFP-WMESNRRYTKDRFTGHPY
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB8 RSRKPKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKI
..: : :: :.:::.:: :. .:. .:. ..::. .: .::. :.....:.:
NP_001 QNRTPPKK------KKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKT
200 210 220 230 240
300 310 320 330
pF1KB8 WFQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
::::.:.:
NP_001 WFQNRRTKWR
250
>>XP_011538046 (OMIM: 186770) PREDICTED: T-cell leukemia (342 aa)
initn: 348 init1: 170 opt: 297 Z-score: 178.4 bits: 41.4 E(85289): 0.0034
Smith-Waterman score: 298; 33.8% identity (60.3% similar) in 234 aa overlap (86-306:61-275)
60 70 80 90 100 110
pF1KB8 APGNHQHPHRITNFFIDNILRPEFGRRKDAGTCCA-GAGGGRGGGAGGEGGASGAEGGGG
:. : ::::. . :.:: :: .: ::::
XP_011 GGCMGPASRLQDGEYGLGCLVGGAYTYGGGGSAAATGAGGAGAYGTGGPGGPGGPAGGGG
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB8 AGGSEQLLGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPG
: . : :: : : :::: :..: : . ::. .:: : . :.
XP_011 ACSMGPLTGS------YNVNMAL-AGGPGPGGG----GGSSGGAGALSAAGVIRV---PA
100 110 120 130
180 190 200 210 220
pF1KB8 G-PLDGSL-KARGLGGGDLSVSSDSDSSQAGANLGAQPMLWPAWVYCTR-YS-DRPSSG-
:: :.. . . :. : .: : .. :.: . . .: :. .: :. :: . .
XP_011 HRPLAGAVAHPQPLATGLPTVPSV--PAMPGVN-NLTGLTFP-WMESNRRYTKDRFTVAL
140 150 160 170 180 190
230 240 250 260 270 280
pF1KB8 -P-----RSRKP-KKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELS
: : .: ....: :. :.:::.:: :. .:. .:. ..::. .: .::. :.
XP_011 SPFTVTRRIGHPYQNRTPPKK-KKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALK
200 210 220 230 240 250
290 300 310 320 330
pF1KB8 LNESQIKIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
....:.: ::::.:.: .. :...
XP_011 MTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVH
260 270 280 290 300 310
>>XP_011538047 (OMIM: 186770) PREDICTED: T-cell leukemia (269 aa)
initn: 340 init1: 162 opt: 289 Z-score: 175.4 bits: 40.5 E(85289): 0.005
Smith-Waterman score: 290; 34.2% identity (59.6% similar) in 225 aa overlap (86-298:61-267)
60 70 80 90 100 110
pF1KB8 APGNHQHPHRITNFFIDNILRPEFGRRKDAGTCCA-GAGGGRGGGAGGEGGASGAEGGGG
:. : ::::. . :.:: :: .: ::::
XP_011 GGCMGPASRLQDGEYGLGCLVGGAYTYGGGGSAAATGAGGAGAYGTGGPGGPGGPAGGGG
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB8 AGGSEQLLGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPG
: . : :: : : :::: :..: : . ::. .:: : . .
XP_011 ACSMGPLTGS------YNVNMAL-AGGPGPGGG----GGSSGGAGALSAAGVIRVPAHR-
100 110 120 130
180 190 200 210 220
pF1KB8 GPLDGSL-KARGLGGGDLSVSSDSDSSQAGANLGAQPMLWPAWVYCTR-YS-DRPSSG--
:: :.. . . :. : .: : .. :.: . . .: :. .: :. :: . .
XP_011 -PLAGAVAHPQPLATGLPTVPSVP--AMPGVN-NLTGLTFP-WMESNRRYTKDRFTVALS
140 150 160 170 180 190
230 240 250 260 270 280
pF1KB8 P-----RSRKP-KKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSL
: : .: ....: :. :.:::.:: :. .:. .:. ..::. .: .::. :..
XP_011 PFTVTRRIGHPYQNRTPPKK-KKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKM
200 210 220 230 240 250
290 300 310 320 330
pF1KB8 NESQIKIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
...:.: ::::.:.:
XP_011 TDAQVKTWFQNRRTKWR
260
>>NP_004088 (OMIM: 600034) homeobox protein EMX1 [Homo s (290 aa)
initn: 287 init1: 201 opt: 285 Z-score: 173.0 bits: 40.2 E(85289): 0.0067
Smith-Waterman score: 285; 34.0% identity (57.9% similar) in 209 aa overlap (103-301:52-249)
80 90 100 110 120 130
pF1KB8 NILRPEFGRRKDAGTCCAGAGGGRGGGAGGEGGASGAEGGGGAGGSEQLLGSGSREP-RQ
.::..:. :::::: :. : ...:.:: :
NP_004 ARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGGAG-SHLLAAAASEEPLRP
30 40 50 60 70 80
140 150 160 170 180
pF1KB8 NPPCAPGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPG--GPLDGSLKARGLGGG
. : .. : : :. . .:. ::.:: . . : :. ::..
NP_004 TALNYPHPSAAEAAFVSGFPAAAAAGAGR-SLYGGPELVFPEAMNHPALTVHPAHQLGAS
90 100 110 120 130
190 200 210 220 230 240
pF1KB8 DLSVSSDSDSSQAGANLGAQPMLWPAWVYCTRY-------SDRPSSGPRSRKPKKKNPNK
:. : ::. .:. . :: .:. :: :..: . : ..:
NP_004 PLQ----PPHSFFGAQ-HRDPLHFYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKP--
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB8 EDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIKKA
:: ::::. :: ::. :. :.:.. .:..:: :::.:.:.:.::::.:.: :.
NP_004 --KRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQ
200 210 220 230 240 250
310 320 330
pF1KB8 TGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
NP_004 KLEEEGPESEQKKKGSHHINRWRIATKQANGEDIDVTSND
260 270 280 290
>>NP_036608 (OMIM: 604295) ventral anterior homeobox 2 [ (290 aa)
initn: 361 init1: 219 opt: 284 Z-score: 172.5 bits: 40.1 E(85289): 0.0072
Smith-Waterman score: 284; 37.8% identity (62.2% similar) in 164 aa overlap (152-301:2-159)
130 140 150 160 170
pF1KB8 LGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDG-----EGGSKTLSLHGGAKKGGDPGGP
::: .: .. ::. . :: .:
NP_036 MGDGGAERDRGPARRAESGGGGGRCGDRSGA
10 20 30
180 190 200 210 220
pF1KB8 LDGSLKARGLGG------GDLSVSSDSDSSQAGANLGAQPMLWPAWV-YCTRYSDRPSSG
:.:.: : :: . :.:: . : ..::. .:: :. . .: : : ..:
NP_036 --GDLRADG-GGHSPTEVAGTSASSPAGSRESGADSDGQPG--PGEADHCRRILVRDAKG
40 50 60 70 80
230 240 250 260 270 280
pF1KB8 PRSRK--PKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQ
. :: . .. :: ::.:::::: ::. ::: .:.. ..: ::..:.:.:.:
NP_036 TIREIVLPKGLDLDRP-KRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ
90 100 110 120 130 140
290 300 310 320 330
pF1KB8 IKIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
.:.::::.:.: ::
NP_036 VKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNILRLLEQGRLLSVPRAPSLLALTP
150 160 170 180 190 200
>>NP_005506 (OMIM: 142994,176450) motor neuron and pancr (401 aa)
initn: 376 init1: 209 opt: 286 Z-score: 172.1 bits: 40.4 E(85289): 0.0076
Smith-Waterman score: 313; 29.3% identity (50.8% similar) in 297 aa overlap (23-310:38-307)
10 20 30 40 50
pF1KB8 MEENDPKPGEAAAAVEGQRQPESSPGGGSGGGGGSSPGEADTGRRRALMLPA
.: ::.:::::.: : . . . ::
NP_005 RIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VLQAPGNHQHPHRITNFFIDNILRPEFGRRKDAGTCCAGAGGGRGGGAGGEGGASGAEGG
::... . . . : : :. : : :..:: ::. :
NP_005 ---APADRLRAESPS---------PP---RLLAAHCALLPKPGFLGAGGGGGGT-----G
70 80 90 100
120 130 140 150 160 170
pF1KB8 GGAGGSEQLLGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGD
:: :: .. :. : .::: : . :: ..::. .: . : :
NP_005 GGHGGPHHHAHPGAAAAAAAAAAAAAAGG---LALGLHPGGAQGGA---GLPAQAALYGH
110 120 130 140 150 160
180 190 200 210 220
pF1KB8 PGGPLDGSLKARGLGGGDLSVSSDSDSSQAGAN---------LGAQPMLWPAWVYCTRYS
: ... : .:.: ..: . . : ::. ::: . :. . .
NP_005 PVYGYSAAAAAAALAGQHPALSYSYPQVQ-GAHPAHPADPIKLGAGTFQLDQWLRASTAG
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB8 DRPSSGPRSRKPKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSL
. : . ..: . .:::::::..:: .:. .:. :.::.. .: .: : :
NP_005 MILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLML
230 240 250 260 270 280
290 300 310 320 330
pF1KB8 NESQIKIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
.:.:.::::::.: : :.. :. :
NP_005 TETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPG
290 300 310 320 330 340
>>NP_061975 (OMIM: 142952) homeobox protein Hox-A5 [Homo (270 aa)
initn: 298 init1: 210 opt: 279 Z-score: 170.3 bits: 39.5 E(85289): 0.0095
Smith-Waterman score: 313; 35.7% identity (58.3% similar) in 230 aa overlap (90-301:38-252)
60 70 80 90 100 110
pF1KB8 HQHPHRITNFFIDNILRPEFGRRKDAGTCCAGAGGGRGG-GAGGEGGASGAEGGGGAGGS
:. .:: : : .: . : :.: :..
NP_061 SFCGRYPNGPDYQLHNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGSG
10 20 30 40 50 60
120 130 140 150 160
pF1KB8 EQ---LLGSGSR---EPRQNPPCAPGAG---GPLP-AAGSDSPGDG--EGGSKTLSLHGG
:. .:.: ::: . : . . ::: .: . :::. .::...:: .:
NP_061 ERARSYAASASAAPAEPRYSQPATSTHSPQPDPLPCSAVAPSPGSDSHHGGKNSLSNSSG
70 80 90 100 110 120
170 180 190 200 210 220
pF1KB8 AKKGGDPGGPLDGSLKARGLGGG---DLSVSSDSDSSQAGANLG--AQPMLWPAWVYCTR
:. .: :. .: .. : ..: : .::.. :.:. . . :::...: :. .
NP_061 AS--ADAGSTHISSREGVGTASGAEEDAPASSEQASAQSEPSPAPPAQPQIYP-WMRKLH
130 140 150 160 170 180
230 240 250 260 270 280
pF1KB8 YSDRPSSGPRSRKPKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQEL
: .:: : :: :::.: : .:. ::. :::::..:: .:. :
NP_061 ISHDNIGGP------------EGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL
190 200 210 220 230
290 300 310 320 330
pF1KB8 SLNESQIKIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
:.: ::::::::.: : ::
NP_061 CLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP
240 250 260 270
333 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 10:46:58 2016 done: Tue Nov 8 10:46:59 2016
Total Scan time: 6.120 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]