Result of FASTA (omim) for
pFN21AB8937
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8937, 288 aa
1>>>pF1KB8937 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.6282+/-0.00039; mu= -4.3174+/- 0.025
mean_var=531.5784+/-119.769, 0's: 0 Z-trim(125.4): 858 B-trim: 2777 in 1/59
Lambda= 0.055628
statistics sampled from 47436 (49039) to 47436 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.833), E-opt: 0.2 (0.575), width: 16
Scan time: 7.930
The best scores are: opt bits E(85289)
NP_057079 (OMIM: 605328,612001) Krueppel-like fact ( 288) 2004 174.3 2.4e-43
NP_001289390 (OMIM: 605328,612001) Krueppel-like f ( 280) 1332 120.4 4e-27
NP_114124 (OMIM: 606139) Krueppel-like factor 16 [ ( 252) 671 67.3 3.5e-11
NP_619638 (OMIM: 609393) Krueppel-like factor 14 [ ( 323) 635 64.5 3e-10
NP_001197 (OMIM: 602902) Krueppel-like factor 9 [H ( 244) 608 62.2 1.1e-09
NP_945194 (OMIM: 608306) transcription factor Sp8 ( 490) 581 60.4 7.8e-09
NP_874359 (OMIM: 608306) transcription factor Sp8 ( 508) 581 60.4 7.9e-09
NP_001171187 (OMIM: 603301,610508) Krueppel-like f ( 495) 530 56.3 1.3e-07
NP_001171189 (OMIM: 603301,610508) Krueppel-like f ( 495) 530 56.3 1.3e-07
NP_003588 (OMIM: 603301,610508) Krueppel-like fact ( 512) 530 56.4 1.4e-07
NP_001027453 (OMIM: 601878) Krueppel-like factor 1 ( 469) 520 55.5 2.3e-07
NP_005646 (OMIM: 601878) Krueppel-like factor 10 i ( 480) 520 55.5 2.3e-07
XP_011536202 (OMIM: 606633,613849) PREDICTED: tran ( 413) 515 55.0 2.8e-07
NP_001287766 (OMIM: 606633,613849) transcription f ( 413) 515 55.0 2.8e-07
NP_001166938 (OMIM: 606633,613849) transcription f ( 431) 515 55.1 2.8e-07
NP_690599 (OMIM: 606633,613849) transcription fact ( 431) 515 55.1 2.8e-07
NP_001238754 (OMIM: 189906) transcription factor S ( 737) 502 54.3 8e-07
XP_011536998 (OMIM: 189906) PREDICTED: transcripti ( 778) 502 54.4 8.3e-07
NP_003100 (OMIM: 189906) transcription factor Sp1 ( 778) 502 54.4 8.3e-07
NP_612482 (OMIM: 189906) transcription factor Sp1 ( 785) 502 54.4 8.3e-07
NP_001313472 (OMIM: 600540) transcription factor S ( 471) 496 53.6 8.6e-07
XP_005249885 (OMIM: 600540) PREDICTED: transcripti ( 767) 496 53.9 1.1e-06
NP_001313471 (OMIM: 600540) transcription factor S ( 767) 496 53.9 1.1e-06
NP_001273747 (OMIM: 602903) Krueppel-like factor 5 ( 366) 488 52.8 1.2e-06
NP_003103 (OMIM: 600540) transcription factor Sp4 ( 784) 496 53.9 1.2e-06
NP_001721 (OMIM: 602903) Krueppel-like factor 5 is ( 457) 488 52.9 1.3e-06
NP_001291 (OMIM: 176807,602053,613659) Krueppel-li ( 283) 476 51.7 1.9e-06
NP_057354 (OMIM: 602016) Krueppel-like factor 2 [H ( 355) 478 52.0 2e-06
NP_001003845 (OMIM: 609391) transcription factor S ( 398) 477 52.0 2.2e-06
XP_005246599 (OMIM: 609391) PREDICTED: transcripti ( 442) 477 52.0 2.4e-06
XP_011509461 (OMIM: 609391) PREDICTED: transcripti ( 454) 477 52.0 2.4e-06
NP_001017371 (OMIM: 601804) transcription factor S ( 713) 480 52.5 2.7e-06
NP_001166183 (OMIM: 601804) transcription factor S ( 778) 480 52.6 2.8e-06
NP_003102 (OMIM: 601804) transcription factor Sp3 ( 781) 480 52.6 2.8e-06
XP_016863768 (OMIM: 609392) PREDICTED: Krueppel-li ( 320) 457 50.2 6e-06
NP_057615 (OMIM: 609392) Krueppel-like factor 3 [H ( 345) 457 50.3 6.2e-06
XP_011525944 (OMIM: 111150,600599,613566,613673) P ( 324) 455 50.1 6.7e-06
NP_006554 (OMIM: 111150,600599,613566,613673) Krue ( 362) 455 50.1 7.2e-06
XP_005247457 (OMIM: 606465) PREDICTED: Krueppel-li ( 416) 453 50.1 8.7e-06
NP_054798 (OMIM: 606465) Krueppel-like factor 15 [ ( 416) 453 50.1 8.7e-06
NP_001300981 (OMIM: 602253) Krueppel-like factor 4 ( 513) 455 50.3 8.8e-06
XP_011511045 (OMIM: 606465) PREDICTED: Krueppel-li ( 435) 453 50.1 8.9e-06
NP_004226 (OMIM: 602253) Krueppel-like factor 4 is ( 479) 454 50.2 9e-06
XP_016875874 (OMIM: 607531) PREDICTED: Krueppel-li ( 352) 439 48.8 1.7e-05
XP_011533214 (OMIM: 607531) PREDICTED: Krueppel-li ( 383) 439 48.9 1.8e-05
XP_011533213 (OMIM: 607531) PREDICTED: Krueppel-li ( 383) 439 48.9 1.8e-05
XP_016875873 (OMIM: 607531) PREDICTED: Krueppel-li ( 393) 439 48.9 1.8e-05
XP_011533212 (OMIM: 607531) PREDICTED: Krueppel-li ( 400) 439 48.9 1.9e-05
XP_011533211 (OMIM: 607531) PREDICTED: Krueppel-li ( 402) 439 48.9 1.9e-05
XP_005266308 (OMIM: 607531) PREDICTED: Krueppel-li ( 402) 439 48.9 1.9e-05
>>NP_057079 (OMIM: 605328,612001) Krueppel-like factor 1 (288 aa)
initn: 2004 init1: 2004 opt: 2004 Z-score: 899.3 bits: 174.3 E(85289): 2.4e-43
Smith-Waterman score: 2004; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KB8 MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDGKDSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDGKDSAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 AWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCEKVYGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 AWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCEKVYGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRFMRSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 SSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRFMRSD
190 200 210 220 230 240
250 260 270 280
pF1KB8 HLTKHARRHANFHPGMLQRRGGGSRTGSLSDYSRSDASSPTISPASSP
::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 HLTKHARRHANFHPGMLQRRGGGSRTGSLSDYSRSDASSPTISPASSP
250 260 270 280
>>NP_001289390 (OMIM: 605328,612001) Krueppel-like facto (280 aa)
initn: 1386 init1: 1332 opt: 1332 Z-score: 607.9 bits: 120.4 E(85289): 4e-27
Smith-Waterman score: 1332; 99.0% identity (100.0% similar) in 195 aa overlap (1-195:1-195)
10 20 30 40 50 60
pF1KB8 MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDGKDSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDGKDSAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 AWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCEKVYGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCEKVYGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRFMRSD
:::::::::::::..
NP_001 SSHLKAHLRTHTGDKEDKEDKEGDPGGWRACQGHRPTVFRPLGSKLFPGHLQAMSTRPPV
190 200 210 220 230 240
>>NP_114124 (OMIM: 606139) Krueppel-like factor 16 [Homo (252 aa)
initn: 846 init1: 576 opt: 671 Z-score: 321.7 bits: 67.3 E(85289): 3.5e-11
Smith-Waterman score: 703; 48.1% identity (60.8% similar) in 291 aa overlap (2-288:3-247)
10 20 30 40 50
pF1KB8 MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDGKDSA
::.: ::.:::. :...:: :::: : ::: ::. :: : :
NP_114 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPE----GAGPAA------------GLD--
10 20 30 40
60 70 80 90 100 110
pF1KB8 SLFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPS
.: : :::.:. :: ::: : ..:: ::::::
NP_114 -----VR--------------AARREAASPG---TPGP-PPPPPAASGPGP-GAAAAPHL
50 60 70
120 130 140 150 160 170
pF1KB8 PAWSEPEPEAGLEPEREPG---PAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCEK
: : : : :: ::.:. . :. . : . ..:.: . : :
NP_114 LAASILADLRG-GPGAAPGGASPASSSSAASSPSSGRAPGAAP-SAAAKSHRCPFPDCAK
80 90 100 110 120 130
180 190 200 210 220 230
pF1KB8 VYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRF
.: ::::::.:::::::::::::.:: :.::::::::::::.:::::::.::::.: :::
NP_114 AYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRF
140 150 160 170 180 190
240 250 260 270 280
pF1KB8 MRSDHLTKHARRHANFHPGMLQRRGGGSRTGSLSD-YSRSDASSPTISPASSP
:::::.:::::: .::: .:.: :.:. : :: : :.::. ::: ::
NP_114 TRSDHLAKHARRHPGFHPDLLRR--PGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL
200 210 220 230 240 250
>>NP_619638 (OMIM: 609393) Krueppel-like factor 14 [Homo (323 aa)
initn: 687 init1: 553 opt: 635 Z-score: 305.0 bits: 64.5 E(85289): 3e-10
Smith-Waterman score: 703; 42.9% identity (60.2% similar) in 324 aa overlap (2-287:3-318)
10 20 30 40
pF1KB8 MAAAAYVDHFAAECLVSMSSRAVVH---------GPREGPE---SRPEGA-------AV
::.: .:.::::::::::. :::: : : : . ::.: .
NP_619 MSAAVACLDYFAAECLVSMSAGAVVHRRPPDPEGAGGAAGSEVGAAPPESALPGPGPPGP
10 20 30 40 50 60
50 60 70 80 90
pF1KB8 AATPTLPRVEERRDGKDSAS-LFVVARILADLNQQAPAPAPAERREGAAARKART---PC
:..: ::.: : .:. ...: . ::: .. . . :. : .. . ::
NP_619 ASVPQLPQVPAPSPGAGGAAPHLLAASVWADLRGSSGEGSWENSGEAPRASSGFSDPIPC
70 80 90 100 110 120
100 110 120 130 140
pF1KB8 RLPPPAPEPTSPGAEGAAAAPPSPAWSEPEPEAGLEPEREPGPAGSG-----------EP
. : : .: : ::::. .: : : . : .::.:: :
NP_619 SVQTPCSE-LAP-ASGAAAVC-APESSSDAPAVPSAPAAPGAPAASGGFSGGALGAGPAP
130 140 150 160 170
150 160 170 180 190 200
pF1KB8 GLRQRVRRGRSRADLESPQRKHKCHYAGCEKVYGKSSHLKAHLRTHTGERPFACSWQDCN
. : :: :: . ..:.: . :: :.: ::::::.: :::::::::.:.: ::.
NP_619 AADQAPRR-RS---VTPAAKRHQCPFPGCTKAYYKSSHLKSHQRTHTGERPFSCDWLDCD
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 KKFARSDELARHYRTHTGEKKFSCPICEKRFMRSDHLTKHARRHANFHPGMLQRRGGGSR
:::.::::::::::::::::.::::.: :.: :::::::::::: ..:: :.. :: :
NP_619 KKFTRSDELARHYRTHTGEKRFSCPLCPKQFSRSDHLTKHARRHPTYHPDMIEYRGR-RR
240 250 260 270 280 290
270 280
pF1KB8 TGS----LSDYSRSDASSPTISPASSP
: :.. .:.::. .:: :
NP_619 TPRIDPPLTSEVESSASGSGPGPAPSFTTCL
300 310 320
>>NP_001197 (OMIM: 602902) Krueppel-like factor 9 [Homo (244 aa)
initn: 717 init1: 574 opt: 608 Z-score: 294.6 bits: 62.2 E(85289): 1.1e-09
Smith-Waterman score: 714; 45.8% identity (65.5% similar) in 264 aa overlap (1-259:1-235)
10 20 30 40 50
pF1KB8 MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDG----K
:.::::.: ::.::::.:.::.: :..: :. : : ..:. : :
NP_001 MSAAAYMDFVAAQCLVSISNRAAV--PEHGVA--PD-AERLRLPEREVTKEHGDPGDTWK
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 DSASLFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAP-EPTSPGAEGAAA
: .: ..:. : :::. : .: . : .: : . .. ..
NP_001 DYCTLVTIAKSLLDLNKYRPIQTP-------------SVCSDSLESPDEDMGSDSDVTTE
60 70 80 90 100
120 130 140 150 160 170
pF1KB8 APPSPAWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCE
. ::. : :: .: :.: . .::. . .:. .. ...::: :.::
NP_001 SGSSPSHS---PEERQDPGSAPSPLSLLHPGV---AAKGK-----HASEKRHKCPYSGCG
110 120 130 140 150
180 190 200 210 220 230
pF1KB8 KVYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKR
:::::::::::: :.::::::: :.: :: :::.:::::.::::::::::.: ::.::::
NP_001 KVYGKSSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKR
160 170 180 190 200 210
240 250 260 270 280
pF1KB8 FMRSDHLTKHARRHANFHPGMLQRRGGGSRTGSLSDYSRSDASSPTISPASSP
::::::::::::::..:::.:..:
NP_001 FMRSDHLTKHARRHTEFHPSMIKRSKKALANAL
220 230 240
>>NP_945194 (OMIM: 608306) transcription factor Sp8 isof (490 aa)
initn: 626 init1: 469 opt: 581 Z-score: 279.6 bits: 60.4 E(85289): 7.8e-09
Smith-Waterman score: 581; 47.8% identity (66.0% similar) in 203 aa overlap (91-288:284-475)
70 80 90 100 110
pF1KB8 LFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGA--AAAPP
: : : :: : . :: :. .:.:
NP_945 DYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLA-GAGGSMLSAGPS
260 270 280 290 300 310
120 130 140 150 160 170
pF1KB8 SPAWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRK--HKCHYAGCEK
.: . :. : .: : : :. .. : : . :.: .:: :.:: :: :
NP_945 APLGGSPRSSA----RRYSGRATCDCPNCQEAERLGPAGASL---RRKGLHSCHIPGCGK
320 330 340 350 360
180 190 200 210 220 230
pF1KB8 VYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRF
::::.:::::::: :::::::.:.: :.:.:.::::: :: :::::::.:.::.:.:::
NP_945 VYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRF
370 380 390 400 410 420
240 250 260 270 280
pF1KB8 MRSDHLTKHARRHANFHPGMLQR-RGGGSRTGSLSDYSRSDASSPTISPASSP
::::::.::.. :.. : . :.:.. :: .: .: :.:: : ::
NP_945 MRSDHLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDSEHSAAGSP---PCHSPELLQPPE
430 440 450 460 470 480
NP_945 PGHRNGLE
490
>>NP_874359 (OMIM: 608306) transcription factor Sp8 isof (508 aa)
initn: 626 init1: 469 opt: 581 Z-score: 279.5 bits: 60.4 E(85289): 7.9e-09
Smith-Waterman score: 581; 47.8% identity (66.0% similar) in 203 aa overlap (91-288:302-493)
70 80 90 100 110
pF1KB8 LFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGA--AAAPP
: : : :: : . :: :. .:.:
NP_874 DYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLA-GAGGSMLSAGPS
280 290 300 310 320 330
120 130 140 150 160 170
pF1KB8 SPAWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRK--HKCHYAGCEK
.: . :. : .: : : :. .. : : . :.: .:: :.:: :: :
NP_874 APLGGSPRSSA----RRYSGRATCDCPNCQEAERLGPAGASL---RRKGLHSCHIPGCGK
340 350 360 370 380
180 190 200 210 220 230
pF1KB8 VYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRF
::::.:::::::: :::::::.:.: :.:.:.::::: :: :::::::.:.::.:.:::
NP_874 VYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRF
390 400 410 420 430 440
240 250 260 270 280
pF1KB8 MRSDHLTKHARRHANFHPGMLQR-RGGGSRTGSLSDYSRSDASSPTISPASSP
::::::.::.. :.. : . :.:.. :: .: .: :.:: : ::
NP_874 MRSDHLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDSEHSAAGSP---PCHSPELLQPPE
450 460 470 480 490 500
NP_874 PGHRNGLE
>>NP_001171187 (OMIM: 603301,610508) Krueppel-like facto (495 aa)
initn: 580 init1: 504 opt: 530 Z-score: 257.5 bits: 56.3 E(85289): 1.3e-07
Smith-Waterman score: 539; 45.5% identity (62.3% similar) in 220 aa overlap (71-287:301-495)
50 60 70 80 90 100
pF1KB8 AATPTLPRVEERRDGKDSASLFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPP
: : :::: :. : :. .. . ::
NP_001 QMIPVTGQSSMLPAFLKPPPQLSVGTVRPILAQAAPAPQPVFV--GPAVPQGAVMLVLPQ
280 290 300 310 320
110 120 130 140 150 160
pF1KB8 PAPEPTSPGAEGAAAAPPSPAWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADL
: : .: : .. :: . : : .:: : . . ..:.
NP_001 GALPPPAPCAANVMAAGNTK----------LLPL---APA----PVFITSSQNCVPQVDF
330 340 350 360 370
170 180 190 200 210 220
pF1KB8 ESPQRKHKCHYAGCEKVYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRT
: .:.. : . ::.:.: :::::::::::::::.:: :::. :.:::::::::.:: ::
NP_001 -SRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSRHRRT
380 390 400 410 420 430
230 240 250 260 270
pF1KB8 HTGEKKFSCPICEKRFMRSDHLTKHARRHANFH--PGMLQRRGGGSRTGSLSDYSRSDAS
::::::: ::.:..::::::::::::::: . . :: . : .: .: . .
NP_001 HTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIAS-----AESPG
440 450 460 470 480
280
pF1KB8 SPTIS-PASSP
:: .: :::.
NP_001 SPLVSMPASA
490
>>NP_001171189 (OMIM: 603301,610508) Krueppel-like facto (495 aa)
initn: 580 init1: 504 opt: 530 Z-score: 257.5 bits: 56.3 E(85289): 1.3e-07
Smith-Waterman score: 539; 45.5% identity (62.3% similar) in 220 aa overlap (71-287:301-495)
50 60 70 80 90 100
pF1KB8 AATPTLPRVEERRDGKDSASLFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPP
: : :::: :. : :. .. . ::
NP_001 QMIPVTGQSSMLPAFLKPPPQLSVGTVRPILAQAAPAPQPVFV--GPAVPQGAVMLVLPQ
280 290 300 310 320
110 120 130 140 150 160
pF1KB8 PAPEPTSPGAEGAAAAPPSPAWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADL
: : .: : .. :: . : : .:: : . . ..:.
NP_001 GALPPPAPCAANVMAAGNTK----------LLPL---APA----PVFITSSQNCVPQVDF
330 340 350 360 370
170 180 190 200 210 220
pF1KB8 ESPQRKHKCHYAGCEKVYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRT
: .:.. : . ::.:.: :::::::::::::::.:: :::. :.:::::::::.:: ::
NP_001 -SRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSRHRRT
380 390 400 410 420 430
230 240 250 260 270
pF1KB8 HTGEKKFSCPICEKRFMRSDHLTKHARRHANFH--PGMLQRRGGGSRTGSLSDYSRSDAS
::::::: ::.:..::::::::::::::: . . :: . : .: .: . .
NP_001 HTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIAS-----AESPG
440 450 460 470 480
280
pF1KB8 SPTIS-PASSP
:: .: :::.
NP_001 SPLVSMPASA
490
>>NP_003588 (OMIM: 603301,610508) Krueppel-like factor 1 (512 aa)
initn: 580 init1: 504 opt: 530 Z-score: 257.3 bits: 56.4 E(85289): 1.4e-07
Smith-Waterman score: 539; 45.5% identity (62.3% similar) in 220 aa overlap (71-287:318-512)
50 60 70 80 90 100
pF1KB8 AATPTLPRVEERRDGKDSASLFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPP
: : :::: :. : :. .. . ::
NP_003 QMIPVTGQSSMLPAFLKPPPQLSVGTVRPILAQAAPAPQPVFV--GPAVPQGAVMLVLPQ
290 300 310 320 330 340
110 120 130 140 150 160
pF1KB8 PAPEPTSPGAEGAAAAPPSPAWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADL
: : .: : .. :: . : : .:: : . . ..:.
NP_003 GALPPPAPCAANVMAAGNTK----------LLPL---APA----PVFITSSQNCVPQVDF
350 360 370 380
170 180 190 200 210 220
pF1KB8 ESPQRKHKCHYAGCEKVYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRT
: .:.. : . ::.:.: :::::::::::::::.:: :::. :.:::::::::.:: ::
NP_003 -SRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSRHRRT
390 400 410 420 430 440
230 240 250 260 270
pF1KB8 HTGEKKFSCPICEKRFMRSDHLTKHARRHANFH--PGMLQRRGGGSRTGSLSDYSRSDAS
::::::: ::.:..::::::::::::::: . . :: . : .: .: . .
NP_003 HTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIAS-----AESPG
450 460 470 480 490 500
280
pF1KB8 SPTIS-PASSP
:: .: :::.
NP_003 SPLVSMPASA
510
288 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:21:35 2016 done: Tue Nov 8 04:21:37 2016
Total Scan time: 7.930 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]