Result of FASTA (omim) for
pFN21AB8933
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8933, 284 aa
1>>>pF1KB8933 284 - 284 aa - 284 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6202+/-0.000346; mu= 16.4504+/- 0.022
mean_var=140.7759+/-29.000, 0's: 0 Z-trim(119.3): 132 B-trim: 1283 in 2/51
Lambda= 0.108096
statistics sampled from 32918 (33091) to 32918 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.388), width: 16
Scan time: 6.480
The best scores are: opt bits E(85289)
NP_005973 (OMIM: 113650,601205,605192,608389) home ( 284) 1924 311.0 1.6e-84
NP_058628 (OMIM: 604994) homeobox protein SIX2 [Ho ( 291) 1442 235.9 7e-62
XP_005264157 (OMIM: 604994) PREDICTED: homeobox pr ( 293) 1358 222.8 6.1e-58
XP_016877091 (OMIM: 113650,601205,605192,608389) P ( 173) 1152 190.4 2.1e-48
NP_005404 (OMIM: 157170,269160,603714) homeobox pr ( 332) 934 156.7 5.3e-38
NP_031400 (OMIM: 206900,212550,606326) homeobox pr ( 246) 920 154.4 2e-37
XP_005267816 (OMIM: 606342) PREDICTED: homeobox pr ( 773) 905 152.7 2e-36
NP_059116 (OMIM: 606342) homeobox protein SIX4 [Ho ( 781) 905 152.7 2.1e-36
NP_787071 (OMIM: 600963,610896) homeobox protein S ( 739) 720 123.8 9.6e-28
NP_620410 (OMIM: 300411) homeobox protein TGIF2LX ( 241) 185 39.7 0.0064
NP_002577 (OMIM: 176311) pre-B-cell leukemia trans ( 430) 186 40.2 0.0081
>>NP_005973 (OMIM: 113650,601205,605192,608389) homeobox (284 aa)
initn: 1924 init1: 1924 opt: 1924 Z-score: 1638.3 bits: 311.0 E(85289): 1.6e-84
Smith-Waterman score: 1924; 99.6% identity (99.6% similar) in 284 aa overlap (1-284:1-284)
10 20 30 40 50 60
pF1KB8 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLCGRPLGAVGKYRVRRKFPLPRT
:::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
NP_005 GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
190 200 210 220 230 240
250 260 270 280
pF1KB8 ARSSNYSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS
::::::::::::::::::::::::::::::::::::::::::::
NP_005 ARSSNYSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS
250 260 270 280
>>NP_058628 (OMIM: 604994) homeobox protein SIX2 [Homo s (291 aa)
initn: 1389 init1: 1299 opt: 1442 Z-score: 1232.0 bits: 235.9 E(85289): 7e-62
Smith-Waterman score: 1445; 74.3% identity (86.7% similar) in 300 aa overlap (1-284:1-291)
10 20 30 40 50 60
pF1KB8 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
:::::.::::::::::::::::::::.:::::::::::::.:::::::::::::::::::
NP_058 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLCGRPLGAVGKYRVRRKFPLPRT
:::::::::::::::::::: :::::::::::.::::: ::::::::::::::::::::.
NP_058 GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_058 IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
130 140 150 160 170 180
190 200 210 220 230
pF1KB8 AAEAKERENTENNNSSSNKQNQLSPLEG-GKPLMSSSEEEFSPPQSPDQNS---VLLLQG
:::::::::.::.::.:. .::.: :: ...:::.: .: .::..: .:::.
NP_058 AAEAKERENNENSNSNSH-----NPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSP
190 200 210 220 230
240 250 260 270 280
pF1KB8 ---------NMGHARSSN---YSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS
..:: . . .:: ...: :: :.: ::::.:.:....::::::
NP_058 PPPGLPSLHSLGHPPGPSAVPVPVPGGGGADP---LQ-HHHGLQDSILNPMSANLVDLGS
240 250 260 270 280 290
>>XP_005264157 (OMIM: 604994) PREDICTED: homeobox protei (293 aa)
initn: 1385 init1: 1295 opt: 1358 Z-score: 1161.2 bits: 222.8 E(85289): 6.1e-58
Smith-Waterman score: 1439; 74.0% identity (86.7% similar) in 300 aa overlap (1-284:1-293)
10 20 30 40 50 60
pF1KB8 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
:::::.::::::::::::::::::::.:::::::::::::.:::::::::::::::::::
XP_005 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLCGRPLGAVGKYRVRRKFPLPRT
:::::::::::::::::::: :::::::::::.::::: ::::::::::::::::::::.
XP_005 GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
XP_005 IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
130 140 150 160 170 180
190 200 210 220 230
pF1KB8 AAEAKERENTENNNSSSNKQNQLSPLEG-GKPLMSSSEEEFSPPQSPDQNS---VLLLQG
::::::: . .:.::.::..: ::.: :: ...:::.: .: .::..: .:::.
XP_005 AAEAKERYEENNENSNSNSHN---PLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSP
190 200 210 220 230
240 250 260 270 280
pF1KB8 ---------NMGHARSSN---YSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS
..:: . . .:: ...: :: :.: ::::.:.:....::::::
XP_005 PPPGLPSLHSLGHPPGPSAVPVPVPGGGGADP---LQ-HHHGLQDSILNPMSANLVDLGS
240 250 260 270 280 290
>>XP_016877091 (OMIM: 113650,601205,605192,608389) PREDI (173 aa)
initn: 1152 init1: 1152 opt: 1152 Z-score: 990.0 bits: 190.4 E(85289): 2.1e-48
Smith-Waterman score: 1152; 99.4% identity (99.4% similar) in 167 aa overlap (1-167:1-167)
10 20 30 40 50 60
pF1KB8 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLCGRPLGAVGKYRVRRKFPLPRT
:::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
XP_016 GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQGEHRKQ
130 140 150 160 170
190 200 210 220 230 240
pF1KB8 AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
>>NP_005404 (OMIM: 157170,269160,603714) homeobox protei (332 aa)
initn: 926 init1: 763 opt: 934 Z-score: 803.2 bits: 156.7 E(85289): 5.3e-38
Smith-Waterman score: 934; 57.8% identity (79.1% similar) in 244 aa overlap (1-239:79-317)
10 20 30
pF1KB8 MSMLPSFGFTQEQVACVCEVLQQGGNLERL
: .::...:. :::: :::.:.. :..:::
NP_005 GGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEETGDIERL
50 60 70 80 90 100
40 50 60 70 80
pF1KB8 GRFLWSLP----ACDHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQL
:::::::: ::. ..:.::.:.:.:::::: ::::.::.:::.:.:. ..: ::: .
NP_005 GRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAM
110 120 130 140 150 160
90 100 110 120 130 140
pF1KB8 WLKAHYVEAEKLCGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHN
::.::: ::::: ::::: : :::::.::::::::::::. ..::::..:..::::: ..
NP_005 WLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQD
170 180 190 200 210 220
150 160 170 180 190 200
pF1KB8 PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENTENNNSSSNKQNQLSPL
:::.: .:::::.::::: :::.::::::::::::: ::.: . . . :. . :
NP_005 PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGMR----SLA
230 240 250 260 270 280
210 220 230 240 250 260
pF1KB8 EGGKPLMSSSEEEFSPPQSPDQN-SVLLLQGNMGHARSSNYSLPGLTASQPSHGLQTHQH
: : : .:.: : :: . : : ... :
NP_005 EPGCPTHGSAESP-STAASPTTSVSSLTERADTGTSILSVTSSDSECDV
290 300 310 320 330
270 280
pF1KB8 QLQDSLLGPLTSSLVDLGS
>>NP_031400 (OMIM: 206900,212550,606326) homeobox protei (246 aa)
initn: 924 init1: 771 opt: 920 Z-score: 792.8 bits: 154.4 E(85289): 2e-37
Smith-Waterman score: 920; 68.1% identity (88.0% similar) in 191 aa overlap (1-187:1-191)
10 20 30 40 50
pF1KB8 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLP----ACDHLHKNESVLKAKAVV
: .:: ..:. .::: :::.:...:..::::::::::: ::. :.::::::.:.:.:
NP_031 MFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 AFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLCGRPLGAVGKYRVRRKFP
::: ::.::::.:::.:.:. ..: ::: :::.::: ::::: ::::: : :::::.:::
NP_031 AFHGGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 LPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRR
:::::::::. ..::::..: .::::: ..:::.: .:::::.::::: :::.:::::::
NP_031 LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 QRDRAAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQG
:::::: ::.:
NP_031 QRDRAAAAKNRLQQQVLSQGSGRALRAEGDGTPEVLGVATSPAASLSSKAATSAISITSS
190 200 210 220 230 240
>>XP_005267816 (OMIM: 606342) PREDICTED: homeobox protei (773 aa)
initn: 909 init1: 880 opt: 905 Z-score: 774.8 bits: 152.7 E(85289): 2e-36
Smith-Waterman score: 905; 59.3% identity (79.0% similar) in 243 aa overlap (7-244:98-334)
10 20 30
pF1KB8 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWS
..:. ..::::::.:::::::.::.:::::
XP_005 AAGAAADQVQLHSELLGRHHHAAAAAAQTPLAFSPDHVACVCEALQQGGNLDRLARFLWS
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB8 LPACDHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAE
:: : :. :::.:::.:.::::.: . :::.:::::.: ::: ::::: ::.:.:::
XP_005 LPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAE
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB8 KLCGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRE
. ::::::: :::.:::::::::::::::: ::::::::..:.: : .: :::: :::.
XP_005 RARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRH
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB8 LAEATGLTTTQVSNWFKNRRQRDRA-AEAKERENTENNNS----SSNKQNQLSPLEGGKP
::. :::. ::::::::::::::: .:.. . ....: : ::. ...::: .:
XP_005 LAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSP----HP
250 260 270 280 290 300
220 230 240 250 260 270
pF1KB8 LMSSSEEEFSPPQSPDQNSVLLLQGNMGHARSSNYSLPGLTASQPSHGLQTHQHQLQDSL
: :::. . : .. : . : .:.:. :
XP_005 LSSSSDGITNLSLSSHMEPVYMQQ--IGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSF
310 320 330 340 350 360
280
pF1KB8 LGPLTSSLVDLGS
XP_005 IQGPSGVILNGLNVGNTQAVALNPPKMSSNIVSNGISMTDILGSTSQDVKEFKVLQSSAN
370 380 390 400 410 420
>>NP_059116 (OMIM: 606342) homeobox protein SIX4 [Homo s (781 aa)
initn: 909 init1: 880 opt: 905 Z-score: 774.7 bits: 152.7 E(85289): 2.1e-36
Smith-Waterman score: 905; 59.3% identity (79.0% similar) in 243 aa overlap (7-244:106-342)
10 20 30
pF1KB8 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWS
..:. ..::::::.:::::::.::.:::::
NP_059 AAGAAADQVQLHSELLGRHHHAAAAAAQTPLAFSPDHVACVCEALQQGGNLDRLARFLWS
80 90 100 110 120 130
40 50 60 70 80 90
pF1KB8 LPACDHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAE
:: : :. :::.:::.:.::::.: . :::.:::::.: ::: ::::: ::.:.:::
NP_059 LPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAE
140 150 160 170 180 190
100 110 120 130 140 150
pF1KB8 KLCGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRE
. ::::::: :::.:::::::::::::::: ::::::::..:.: : .: :::: :::.
NP_059 RARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRH
200 210 220 230 240 250
160 170 180 190 200 210
pF1KB8 LAEATGLTTTQVSNWFKNRRQRDRA-AEAKERENTENNNS----SSNKQNQLSPLEGGKP
::. :::. ::::::::::::::: .:.. . ....: : ::. ...::: .:
NP_059 LAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSP----HP
260 270 280 290 300 310
220 230 240 250 260 270
pF1KB8 LMSSSEEEFSPPQSPDQNSVLLLQGNMGHARSSNYSLPGLTASQPSHGLQTHQHQLQDSL
: :::. . : .. : . : .:.:. :
NP_059 LSSSSDGITNLSLSSHMEPVYMQQ--IGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSF
320 330 340 350 360
280
pF1KB8 LGPLTSSLVDLGS
NP_059 IQGPSGVILNGLNVGNTQAVALNPPKMSSNIVSNGISMTDILGSTSQDVKEFKVLQSSAN
370 380 390 400 410 420
>>NP_787071 (OMIM: 600963,610896) homeobox protein SIX5 (739 aa)
initn: 733 init1: 708 opt: 720 Z-score: 619.1 bits: 123.8 E(85289): 9.6e-28
Smith-Waterman score: 732; 48.4% identity (72.0% similar) in 254 aa overlap (5-244:80-333)
10 20 30
pF1KB8 MSMLPSFG--FTQEQVACVCEVLQQGGNLERLGR
: : :. ::::::::.: :.:. ::.:
NP_787 AGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSR
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB8 FLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHY
:: .:: ..:. .. ::.:.:.:::.::.. :::..:::. : .: ::.:.:.:.:
NP_787 FLGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARY
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB8 VEAEKLCGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPR
:::. :: :::: :::.:.:::::.:::::::: :::::.::..:. : : ::.:
NP_787 HEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPD
170 180 190 200 210 220
160 170 180 190 200
pF1KB8 EKRELAEATGLTTTQVSNWFKNRRQRDR--AAEAKERENTENNNSSSNKQNQLSP--LE-
:::.:: :::. ::::::::::::::: :. . .. ..: ... ... :: ::
NP_787 EKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLER
230 240 250 260 270 280
210 220 230 240 250 260
pF1KB8 GGKPLMSSSEEEFS-------PPQSPDQNSVLLLQGNMGHARSSNYSLPGLTASQPSHGL
:. :. . . . : :: .: .:..:.. : .:
NP_787 GAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLA
290 300 310 320 330 340
270 280
pF1KB8 QTHQHQLQDSLLGPLTSSLVDLGS
NP_787 LGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQ
350 360 370 380 390 400
>>NP_620410 (OMIM: 300411) homeobox protein TGIF2LX [Hom (241 aa)
initn: 170 init1: 117 opt: 185 Z-score: 173.5 bits: 39.7 E(85289): 0.0064
Smith-Waterman score: 185; 28.6% identity (58.4% similar) in 154 aa overlap (134-280:60-206)
110 120 130 140 150 160
pF1KB8 GAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREW-YAH--NPYPSPREKRELAEA
.: .::.: : : . ::: .::. :.:
NP_620 TSIMSRNNADTGRVLALPEHKKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEK
30 40 50 60 70 80
170 180 190 200 210 220
pF1KB8 TGLTTTQVSNWFKNRRQRDRAAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEF
:.:. :.:::: : :.: ..:.: . ...:. . . :.. . .:
NP_620 TNLSLLQISNWFINARRRILPDMLQQRRNDPIIGHKTGKDAHATHLQSTE----ASVPAK
90 100 110 120 130 140
230 240 250 260 270
pF1KB8 SPPQSPDQNSVLLL----QGNMGHARSSNYSLPGLTASQPSHGLQTHQHQLQDSLLGPLT
: :..::. . : : .:.:.. .. . : . :: :. ..... :. .: .
NP_620 SGPSGPDNVQSLPLWPLPKGQMSREKQPD---PESAPSQKLTGIAQPKKKVKVSVTSPSS
150 160 170 180 190 200
280
pF1KB8 SSLVDLGS
::
NP_620 PELVSPEEHADFSSFLLLVDAAVQRAAELELEKKQEPNP
210 220 230 240
284 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:45:57 2016 done: Sat Nov 5 22:45:58 2016
Total Scan time: 6.480 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]