Result of FASTA (omim) for
pFN21AB8930
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8930, 281 aa
1>>>pF1KB8930 281 - 281 aa - 281 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8095+/-0.000277; mu= 11.7444+/- 0.018
mean_var=164.5446+/-33.198, 0's: 0 Z-trim(123.9): 270 B-trim: 38 in 1/57
Lambda= 0.099984
statistics sampled from 44216 (44516) to 44216 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.522), width: 16
Scan time: 6.830
The best scores are: opt bits E(85289)
NP_006553 (OMIM: 604255) transcription factor LBX1 ( 281) 1859 279.0 7.1e-75
NP_001269359 (OMIM: 607164) transcription factor L ( 198) 515 84.9 1.3e-16
NP_001009812 (OMIM: 607164) transcription factor L ( 194) 381 65.6 8.3e-11
NP_005512 (OMIM: 186770) T-cell leukemia homeobox ( 330) 275 50.5 4.8e-06
NP_006158 (OMIM: 602041) homeobox protein Nkx-3.1 ( 234) 272 50.0 5.1e-06
NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 273 50.3 5.8e-06
NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 273 50.3 6.1e-06
NP_004378 (OMIM: 108900,187500,217095,225250,60058 ( 324) 268 49.5 9.5e-06
NP_057254 (OMIM: 604240) T-cell leukemia homeobox ( 284) 267 49.3 9.6e-06
NP_066305 (OMIM: 604640) T-cell leukemia homeobox ( 291) 266 49.2 1.1e-05
NP_055175 (OMIM: 603245) homeobox protein Nkx-2.8 ( 239) 262 48.5 1.4e-05
XP_011538046 (OMIM: 186770) PREDICTED: T-cell leuk ( 342) 259 48.3 2.4e-05
NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 257 47.9 2.7e-05
NP_001182446 (OMIM: 186770) T-cell leukemia homeob ( 257) 254 47.4 3.3e-05
XP_011541345 (OMIM: 604823) PREDICTED: homeobox pr ( 233) 246 46.2 6.9e-05
NP_003649 (OMIM: 604823) homeobox protein BarH-lik ( 279) 246 46.3 7.8e-05
NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 ( 354) 246 46.4 9.1e-05
NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 ( 364) 246 46.4 9.3e-05
NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346) 244 46.1 0.00011
NP_001091639 (OMIM: 611074) brain-specific homeobo ( 233) 240 45.3 0.00013
NP_068777 (OMIM: 142995) H2.0-like homeobox protei ( 488) 245 46.4 0.00013
NP_064447 (OMIM: 605212) barH-like 2 homeobox prot ( 387) 243 46.0 0.00013
NP_003308 (OMIM: 118700,188550,600635,610978) home ( 371) 241 45.7 0.00016
NP_001073136 (OMIM: 118700,188550,600635,610978) h ( 401) 241 45.7 0.00016
XP_011538047 (OMIM: 186770) PREDICTED: T-cell leuk ( 269) 238 45.1 0.00017
NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 235 44.7 0.00023
NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 235 44.7 0.00023
NP_001243268 (OMIM: 602041) homeobox protein Nkx-3 ( 159) 231 43.9 0.00024
NP_002440 (OMIM: 123101,168500,168550,604757) home ( 267) 231 44.1 0.00034
NP_796374 (OMIM: 605955) homeobox protein Nkx-6.2 ( 277) 228 43.7 0.00047
NP_001476 (OMIM: 601135) homeobox protein GBX-2 is ( 348) 229 43.9 0.00049
NP_001099044 (OMIM: 613380) homeobox protein HMX3 ( 357) 229 44.0 0.0005
NP_005510 (OMIM: 600647) homeobox protein HMX2 [Ho ( 273) 227 43.5 0.00051
XP_005269800 (OMIM: 600647) PREDICTED: homeobox pr ( 273) 227 43.5 0.00051
NP_067545 (OMIM: 603260) homeobox protein BarH-lik ( 254) 226 43.4 0.00054
XP_016872278 (OMIM: 605955) PREDICTED: homeobox pr ( 277) 226 43.4 0.00057
NP_004396 (OMIM: 126255) homeobox protein DLX-2 [H ( 328) 227 43.6 0.00058
NP_001180 (OMIM: 602183,613330) homeobox protein N ( 333) 227 43.6 0.00059
NP_002132 (OMIM: 142953) homeobox protein Hox-A4 [ ( 320) 224 43.2 0.00077
XP_016867454 (OMIM: 603354) PREDICTED: homeobox pr ( 203) 218 42.1 0.001
XP_016867453 (OMIM: 603354) PREDICTED: homeobox pr ( 204) 218 42.1 0.001
NP_002720 (OMIM: 604420) hematopoietically-express ( 270) 219 42.4 0.0011
NP_059105 (OMIM: 605560) homeobox protein Hox-C10 ( 342) 220 42.6 0.0012
XP_016868632 (OMIM: 610772) PREDICTED: homeobox pr ( 265) 218 42.2 0.0012
NP_001092304 (OMIM: 603354) homeobox protein GBX-1 ( 363) 218 42.4 0.0015
NP_703149 (OMIM: 300154) homeobox protein ESX1 [Ho ( 406) 217 42.3 0.0018
XP_005257332 (OMIM: 142967) PREDICTED: homeobox pr ( 247) 213 41.5 0.0019
NP_001158727 (OMIM: 142994,176450) motor neuron an ( 189) 211 41.1 0.002
NP_055283 (OMIM: 607158) homeobox protein VENTX [H ( 258) 212 41.3 0.0022
NP_002439 (OMIM: 106600,142983,189500,608874) home ( 303) 213 41.6 0.0022
>>NP_006553 (OMIM: 604255) transcription factor LBX1 [Ho (281 aa)
initn: 1859 init1: 1859 opt: 1859 Z-score: 1465.2 bits: 279.0 E(85289): 7.1e-75
Smith-Waterman score: 1859; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KB8 MTSKEDGKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MTSKEDGKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AAADKHAQGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AAADKHAQGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKSRPGSPVLPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKSRPGSPVLPPG
190 200 210 220 230 240
250 260 270 280
pF1KB8 APKAPGAGALQLSPASPLTDQPASSQDCSEDEEDEEIDVDD
:::::::::::::::::::::::::::::::::::::::::
NP_006 APKAPGAGALQLSPASPLTDQPASSQDCSEDEEDEEIDVDD
250 260 270 280
>>NP_001269359 (OMIM: 607164) transcription factor LBX2 (198 aa)
initn: 591 init1: 513 opt: 515 Z-score: 419.3 bits: 84.9 E(85289): 1.3e-16
Smith-Waterman score: 523; 46.7% identity (61.6% similar) in 229 aa overlap (59-281:13-198)
30 40 50 60 70 80
pF1KB8 SNKPLTPFSIEDILNKPSVRRSYSLCGAAHLLAAADKHAQGGLPLAGRA-LLSQ-----T
::. :: : .: : : : . :
NP_001 MNSGREPRTPRTLLSIADILAPRMVPRAPSAPQLPESGPGPT
10 20 30 40
90 100 110 120 130 140
pF1KB8 SPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEK
:::::::::.::::.::.. .:: .::: : .: .:::::::::: .:. :::.
NP_001 SPLCALEELTSKTFRGLDARALQPSEGRAGPDALGPGPFGRKRRKSRTAFTAQQVLELER
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB8 RFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQ
::..::::.:..:: .: .:::.::::.:::::::::::::.:::.::: : . :.:
NP_001 RFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSP---
110 120 130 140 150
210 220 230 240 250 260
pF1KB8 MDIVALAELEQNSEATAGGGGGCGRAKSRPGSPVLPPGAPKAPGAGALQLSPASPLTDQP
... :. : :: ::: :: : :.::.:
NP_001 -EVL------------------CSLA--------LPEGAPD-PG---LCLGPAGP-----
160 170 180
270 280
pF1KB8 ASSQDCSEDEEDEEIDVDD
: ::::.:::
NP_001 ----DSRPHLSDEEIQVDD
190
>>NP_001009812 (OMIM: 607164) transcription factor LBX2 (194 aa)
initn: 426 init1: 370 opt: 381 Z-score: 315.0 bits: 65.6 E(85289): 8.3e-11
Smith-Waterman score: 389; 45.9% identity (61.6% similar) in 172 aa overlap (110-281:66-194)
80 90 100 110 120 130
pF1KB8 SQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYE
: : .: .:::::::::: .:. :
NP_001 RPGGWRWARRDLCKTASRAENNSQACRPQRRAGPDALGPGPFGRKRRKSRTAFTAQQVLE
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB8 LEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGP
::.::..::::.:..:: .: .:::.::::.:::::::::::::.:::.::: : . :.:
NP_001 LERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSP
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB8 SGQMDIVALAELEQNSEATAGGGGGCGRAKSRPGSPVLPPGAPKAPGAGALQLSPASPLT
... :. : :: ::: :: : :.::.:
NP_001 ----EVL------------------CSLA--------LPEGAPD-PG---LCLGPAGP-D
160 170 180
260 270 280
pF1KB8 DQPASSQDCSEDEEDEEIDVDD
..: : ::::.:::
NP_001 SRPHLS--------DEEIQVDD
190
>>NP_005512 (OMIM: 186770) T-cell leukemia homeobox prot (330 aa)
initn: 267 init1: 243 opt: 275 Z-score: 229.5 bits: 50.5 E(85289): 4.8e-06
Smith-Waterman score: 275; 40.0% identity (65.0% similar) in 140 aa overlap (60-197:140-274)
30 40 50 60 70 80
pF1KB8 NKPLTPFSIEDILNKPSVRRSYSLCGAAHLLAAADKHAQGGLPLA-GRALLSQTSPLCAL
::.: : : ::: : . .. . ..
NP_005 GPGPGGGGGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQ---PLATGLPTVPSVPAMPGV
110 120 130 140 150 160
90 100 110 120 130 140
pF1KB8 EELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQK
..:.. :: .: . . . : : .:: :..: ::.:: :: :::::: ::
NP_005 NNLTGLTFPWMESNRRYTKDRFTGHPY--QNRTPPKKKKPRTSFTRLQICELEKRFHRQK
170 180 190 200 210 220
150 160 170 180 190 200
pF1KB8 YLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDL-EEMKADVESAKKLGPSGQMDIVA
::. :.: .:. : .:.::: :::::::.: .:. :: .:. ..:...
NP_005 YLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQ
230 240 250 260 270 280
210 220 230 240 250 260
pF1KB8 LAELEQNSEATAGGGGGCGRAKSRPGSPVLPPGAPKAPGAGALQLSPASPLTDQPASSQD
NP_005 KSLAQPLPADPLCVHNSSLFALQNLQPWSDDSTKITSVTSVASACE
290 300 310 320 330
>>NP_006158 (OMIM: 602041) homeobox protein Nkx-3.1 isof (234 aa)
initn: 258 init1: 208 opt: 272 Z-score: 229.0 bits: 50.0 E(85289): 5.1e-06
Smith-Waterman score: 272; 35.2% identity (58.6% similar) in 210 aa overlap (11-211:9-210)
10 20 30 40 50
pF1KB8 MTSKEDGKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHL-
::: . .. ::. : :::: : :.::: . :.. . .
NP_006 MLRVPEPRPGEAKAEGA----APPTPS-KPLTSFLIQDILRDGAQRQGGRTSSQRQRD
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 -LAAADKHAQGGLPLAGRALLSQ--TSPLCALEE---LASKTFKGLEVSVLQAAEGRDGM
. . .:: :: : .: :.: : :: :: . : : .:. .:
NP_006 PEPEPEPEPEGGRSRAG-AQNDQLSTGPRAAPEEAETLAETEPERHLGSYLLDSENTSG-
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 TIFGQRQTPKK-RRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITW
.. ::::. ...::.::.. :. :::..: .::::: .: ..:..: ::..:: :
NP_006 ALPRLPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIW
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 FQNRRAKLKR-DLEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKSR
::::: : :: .: .:.:. ..: :. . . . : :
NP_006 FQNRRYKTKRKQLSSELGDLEKHSSL-PALKEEAFSRASLVSVYNSYPYYPYLYCVGSWS
180 190 200 210 220 230
240 250 260 270 280
pF1KB8 PGSPVLPPGAPKAPGAGALQLSPASPLTDQPASSQDCSEDEEDEEIDVDD
NP_006 PAFW
>>NP_064448 (OMIM: 605211) barH-like 1 homeobox protein (327 aa)
initn: 232 init1: 232 opt: 273 Z-score: 228.0 bits: 50.3 E(85289): 5.8e-06
Smith-Waterman score: 273; 31.5% identity (53.3% similar) in 270 aa overlap (2-258:63-313)
10 20 30
pF1KB8 MTSKEDGKAAPGEERRRSPLDHLPPPANSNK
: . : ..:: . . .: .: ::.:
NP_064 RSPLELSPRSESSSDCSSPASPGRDCLETGTPRPGGASGPGLDSHLQP-GQLSAPAQSRT
40 50 60 70 80 90
40 50 60 70 80
pF1KB8 PLTPFSIEDILNKPSVRRSYSLCGAAHLLAAADKHAQGGLPLAGRALLSQTSPLC--ALE
. : :.::: : : .. .: . : : : .... :.
NP_064 VTSSFLIRDILAD---------CKPLAACAPYSSSGQPAAPEPGGRLAAKAAEDFRDKLD
100 110 120 130 140
90 100 110 120 130 140
pF1KB8 ELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTP----KKRRKSRTAFTNHQIYELEKRFL
. .:.. . : .: . :: : ..:..: :: ::.:::::.::. .::. :
NP_064 KSGSNASSDSEYKVKE--EG--DREISSSRDSPPVRLKKPRKARTAFTDHQLAQLERSFE
150 160 170 180 190
150 160 170 180 190
pF1KB8 YQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRD----LEEM-KADVESA-KKLGP
::::: :: ..: .:.::..:: ::.::::.: ::. :: . .: :: ... :
NP_064 RQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFP
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB8 SGQMDIVALAELEQNSEATAGGGGGCGRAKSRPGSPVLPPGAPKAPGAGALQLS-PASPL
: . .:. :. :.. :. : : . : .:. : : : ::
NP_064 SPYFYPQSLV-----SNLDPGAALYLYRGPSAPPPALQRPLVPRILIHGLQGASEPPPPL
260 270 280 290 300 310
260 270 280
pF1KB8 TDQPASSQDCSEDEEDEEIDVDD
NP_064 PPLAGVLPRAAQPR
320
>>NP_061815 (OMIM: 142992,612109) homeobox protein HMX1 (348 aa)
initn: 198 init1: 198 opt: 273 Z-score: 227.7 bits: 50.3 E(85289): 6.1e-06
Smith-Waterman score: 273; 33.5% identity (60.6% similar) in 203 aa overlap (67-265:147-335)
40 50 60 70 80 90
pF1KB8 SIEDILNKPSVRRSYSLCGAAHLLAAADKHAQGGLPLA-GRALLSQTSPLCALEELASKT
:.:. : . : . ... . : . :. :
NP_061 YPRAHGGYGGGLSPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGT
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB8 FKGLEVSVLQAAEG--RDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPA
.. :.. . :: : : :. . : : ..:.::.:. :...::. : ..::: :
NP_061 EEASELAEVPAAAGETRGGVGVGGGR-----KKKTRTVFSRSQVFQLESTFDLKRYLSSA
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB8 DRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQMDIVALAELEQ
.: .: .: ::..:: :::::: : ::.: :..:.:. :.: : . .: . : .
NP_061 ERAGLAASLQLTETQVKIWFQNRRNKWKRQLA---AELEAAS-LSPPGAQRLVRVPVLYH
240 250 260 270 280
220 230 240 250 260 270
pF1KB8 NSEATAGGGGGCGRAKSRPGSPVLPPGAPKAPG-AGALQLSPASPLTDQPASSQDCSEDE
.: .:...: . : .:. : : : .::: : ::. ::..
NP_061 ESPPAAAAAGP-PATLPFPLAPAAPAPPPPLLGFSGAL----AYPLAAFPAAASVPFLRA
290 300 310 320 330 340
280
pF1KB8 EDEEIDVDD
NP_061 QMPGLV
>>NP_004378 (OMIM: 108900,187500,217095,225250,600584,61 (324 aa)
initn: 341 init1: 237 opt: 268 Z-score: 224.2 bits: 49.5 E(85289): 9.5e-06
Smith-Waterman score: 289; 30.4% identity (50.2% similar) in 289 aa overlap (23-265:2-286)
10 20 30 40 50
pF1KB8 MTSKEDGKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCG--AAH
.: :: . : ::::..:::: . .:: . : .:.
NP_004 MFPSPALT--P-TPFSVKDILNLEQQQRSLAAAGELSAR
10 20 30
60 70 80 90
pF1KB8 LLA-----------------AADKHAQGGLPLAGRALLSQTSPL-CALEELASKTF----
: : :. . : ::: : :: :: :. .:
NP_004 LEATLAPSSCMLAAFKPEAYAGPEAAAPGLPELRAELGRAPSPAKCASAFPAAPAFYPRA
40 50 60 70 80 90
100 110 120 130 140
pF1KB8 ------------KGLEVSVLQ-AAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKR
. :. .:: :.: . . ..: ..::: :. :.. :.::::.:
NP_004 YSDPDPAKDPRAEKKELCALQKAVELEKTEADNAERPRARRRRKPRVLFSQAQVYELERR
100 110 120 130 140 150
150 160 170 180 190 200
pF1KB8 FLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQM
: :.::: .:::.:. : ::..:: :::::: : ::. ... .. . :
NP_004 FKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPP-PPPPPA
160 170 180 190 200 210
210 220 230 240 250
pF1KB8 DIVALAELEQNSEATAGGGG------GCG-RAKSRPGSPVLPP--GAPKAPGAGALQLSP
.:. : .... : .. : : . . :. : :: .:: . :
NP_004 RRIAVPVLVRDGKPCLGDSAPYAPAYGVGLNPYGYNAYPAYPGYGGAACSPGYSCTAAYP
220 230 240 250 260 270
260 270 280
pF1KB8 ASPLTDQPASSQDCSEDEEDEEIDVDD
:.: :::..
NP_004 AGPSPAQPATAAANNNFVNFGVGDLNAVQSPGIPQSNSGVSTLHGIRAW
280 290 300 310 320
>>NP_057254 (OMIM: 604240) T-cell leukemia homeobox prot (284 aa)
initn: 282 init1: 251 opt: 267 Z-score: 224.1 bits: 49.3 E(85289): 9.6e-06
Smith-Waterman score: 267; 50.0% identity (72.7% similar) in 88 aa overlap (118-204:150-237)
90 100 110 120 130 140
pF1KB8 LEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQ
: .:: ::.: ::.:. :. :::.::: :
NP_057 WMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQ
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB8 KYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDL-EEMKADVESAKKLGPSGQMDIV
:::. :.: .:. : .:.::: :::::::.: .:. :: .:. . : .: :.:
NP_057 KYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDAL
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 ALAELEQNSEATAGGGGGCGRAKSRPGSPVLPPGAPKAPGAGALQLSPASPLTDQPASSQ
NP_057 PRPLRPPLPPDPLCLHNSSLFALQNLQPWAEDNKVASVSGLASVV
240 250 260 270 280
>>NP_066305 (OMIM: 604640) T-cell leukemia homeobox prot (291 aa)
initn: 274 init1: 244 opt: 266 Z-score: 223.2 bits: 49.2 E(85289): 1.1e-05
Smith-Waterman score: 266; 51.1% identity (75.0% similar) in 88 aa overlap (118-204:159-246)
90 100 110 120 130 140
pF1KB8 LEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQ
: .:: ::.: ::.:. :: :::::: :
NP_066 ESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQ
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 KYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDL-EEMKADVESAKKLGPSGQMDIV
:::. :.: .:..: .:.::: :::::::.: .:. :: .:. ..:..: . : :
NP_066 KYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAF
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB8 ALAELEQNSEATAGGGGGCGRAKSRPGSPVLPPGAPKAPGAGALQLSPASPLTDQPASSQ
NP_066 QKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV
250 260 270 280 290
281 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:21:01 2016 done: Tue Nov 8 04:21:02 2016
Total Scan time: 6.830 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]