Result of FASTA (ccds) for
pFN21AB8859
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8859, 95 aa
1>>>pF1KB8859 95 - 95 aa - 95 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1993+/-0.000703; mu= 9.1865+/- 0.043
mean_var=58.1741+/-11.817, 0's: 0 Z-trim(109.1): 44 B-trim: 342 in 1/49
Lambda= 0.168155
statistics sampled from 10597 (10643) to 10597 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.734), E-opt: 0.2 (0.327), width: 16
Scan time: 1.380
The best scores are: opt bits E(32554)
CCDS3391.1 S100P gene_id:6286|Hs108|chr4 ( 95) 601 153.4 1.9e-38
CCDS1047.1 S100A1 gene_id:6271|Hs108|chr1 ( 94) 325 86.5 2.7e-18
CCDS13736.1 S100B gene_id:6285|Hs108|chr21 ( 92) 315 84.0 1.4e-17
CCDS43333.1 S100Z gene_id:170591|Hs108|chr5 ( 99) 305 81.6 8.3e-17
CCDS1044.1 S100A2 gene_id:6273|Hs108|chr1 ( 97) 259 70.4 1.9e-13
CCDS1042.1 S100A4 gene_id:6275|Hs108|chr1 ( 101) 258 70.2 2.3e-13
CCDS1008.1 S100A10 gene_id:6281|Hs108|chr1 ( 97) 257 70.0 2.6e-13
CCDS1037.1 S100A12 gene_id:6283|Hs108|chr1 ( 92) 253 69.0 4.9e-13
CCDS1009.1 S100A11 gene_id:6282|Hs108|chr1 ( 105) 250 68.3 9.1e-13
CCDS30861.1 FLG2 gene_id:388698|Hs108|chr1 (2391) 243 67.1 4.5e-11
>>CCDS3391.1 S100P gene_id:6286|Hs108|chr4 (95 aa)
initn: 601 init1: 601 opt: 601 Z-score: 803.6 bits: 153.4 E(32554): 1.9e-38
Smith-Waterman score: 601; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKD
10 20 30 40 50 60
70 80 90
pF1KB8 LDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
:::::::::::::::::::::::::::::::::::
CCDS33 LDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
70 80 90
>>CCDS1047.1 S100A1 gene_id:6271|Hs108|chr1 (94 aa)
initn: 367 init1: 323 opt: 325 Z-score: 441.8 bits: 86.5 E(32554): 2.7e-18
Smith-Waterman score: 325; 55.7% identity (83.0% similar) in 88 aa overlap (2-89:3-90)
10 20 30 40 50
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLK
.:::::: .:.:: .::.::. :.: ::: :.. :: :::.. :: :::::..:
CCDS10 MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK
10 20 30 40 50 60
60 70 80 90
pF1KB8 DLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
.:: :::..:::.:..:.:::.: ::...:
CCDS10 ELDENGDGEVDFQEYVVLVAALTVACNNFFWENS
70 80 90
>>CCDS13736.1 S100B gene_id:6285|Hs108|chr21 (92 aa)
initn: 315 init1: 315 opt: 315 Z-score: 428.8 bits: 84.0 E(32554): 1.4e-17
Smith-Waterman score: 315; 51.1% identity (81.1% similar) in 90 aa overlap (1-90:1-90)
10 20 30 40 50 60
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKD
:.::: :: .:::: .::: ::. . : :.::: :...:: ::. :....:::...
CCDS13 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET
10 20 30 40 50 60
70 80 90
pF1KB8 LDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
:: .::.. ::.::..::: .:.:::..::
CCDS13 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE
70 80 90
>>CCDS43333.1 S100Z gene_id:170591|Hs108|chr5 (99 aa)
initn: 305 init1: 305 opt: 305 Z-score: 415.2 bits: 81.6 E(32554): 8.3e-17
Smith-Waterman score: 305; 53.4% identity (78.4% similar) in 88 aa overlap (2-89:3-90)
10 20 30 40 50
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLK
:.:: :: .: .: ::::.: . :.:::::.:...:: ::. :. . :::...
CCDS43 MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLVDKIVQ
10 20 30 40 50 60
60 70 80 90
pF1KB8 DLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
::::: : .:::.::.:.:::.: ::. ::
CCDS43 DLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK
70 80 90
>>CCDS1044.1 S100A2 gene_id:6273|Hs108|chr1 (97 aa)
initn: 276 init1: 258 opt: 259 Z-score: 355.1 bits: 70.4 E(32554): 1.9e-13
Smith-Waterman score: 259; 42.7% identity (75.3% similar) in 89 aa overlap (2-90:3-91)
10 20 30 40 50
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLK
. :: :..... .: .:: .::. :.:::.: :..::::.:. :.... ::.
CCDS10 MCSSLEQALAVLVTTFHKYSCQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMG
10 20 30 40 50 60
60 70 80 90
pF1KB8 DLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
.:: :.: ::::.:. ::.: :: :. .:.
CCDS10 SLDENSDQQVDFQEYAVFLALITVMCNDFFQGCPDRP
70 80 90
>>CCDS1042.1 S100A4 gene_id:6275|Hs108|chr1 (101 aa)
initn: 258 init1: 258 opt: 258 Z-score: 353.5 bits: 70.2 E(32554): 2.3e-13
Smith-Waterman score: 258; 43.7% identity (78.2% similar) in 87 aa overlap (4-90:5-91)
10 20 30 40 50
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLK
:: :. .....: .:::.::. :.:.::: :. .:::.:: . :. : .::..
CCDS10 MACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMS
10 20 30 40 50 60
60 70 80 90
pF1KB8 DLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
.::.: : .:::.:. ::.. :. :...::
CCDS10 NLDSNRDNEVDFQEYCVFLSCIAMMCNEFFEGFPDKQPRKK
70 80 90 100
>>CCDS1008.1 S100A10 gene_id:6281|Hs108|chr1 (97 aa)
initn: 225 init1: 225 opt: 257 Z-score: 352.4 bits: 70.0 E(32554): 2.6e-13
Smith-Waterman score: 257; 45.5% identity (76.1% similar) in 88 aa overlap (2-89:3-87)
10 20 30 40 50
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLK
...: :: .. .: ...:..: ::: .:.::::::.::::.. :: ::::..:
CCDS10 MPSQMEHAMETMMFTFHKFAGDKGY---LTKEDLRVLMEKEFPGFLENQKDPLAVDKIMK
10 20 30 40 50
60 70 80 90
pF1KB8 DLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
::: :..: :. :. ..:..: ::. ::
CCDS10 DLDQCRDGKVGFQSFFSLIAGLTIACNDYFVVHMKQKGKK
60 70 80 90
>>CCDS1037.1 S100A12 gene_id:6283|Hs108|chr1 (92 aa)
initn: 269 init1: 253 opt: 253 Z-score: 347.6 bits: 69.0 E(32554): 4.9e-13
Smith-Waterman score: 253; 45.1% identity (72.5% similar) in 91 aa overlap (1-91:1-91)
10 20 30 40 50 60
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKD
::.:: . :...: .:: .: .::.::::: :. ::: . ... ::: ..:....
CCDS10 MTKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQG
10 20 30 40 50 60
70 80 90
pF1KB8 LDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
:::: : ::::.::: .:: .: : . .:
CCDS10 LDANQDEQVDFQEFISLVAIALKAAHYHTHKE
70 80 90
>>CCDS1009.1 S100A11 gene_id:6282|Hs108|chr1 (105 aa)
initn: 250 init1: 250 opt: 250 Z-score: 342.7 bits: 68.3 E(32554): 9.1e-13
Smith-Waterman score: 250; 40.7% identity (74.7% similar) in 91 aa overlap (2-92:8-98)
10 20 30 40 50
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAV
:: : . .: ::..:.:..: . ::.: :. .:. :: .: .. :: ..
CCDS10 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
10 20 30 40 50 60
60 70 80 90
pF1KB8 DKLLKDLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
:...: ::.:.:.:.:::::. ...... ::: : ::
CCDS10 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
70 80 90 100
>>CCDS30861.1 FLG2 gene_id:388698|Hs108|chr1 (2391 aa)
initn: 243 init1: 243 opt: 243 Z-score: 312.2 bits: 67.1 E(32554): 4.5e-11
Smith-Waterman score: 243; 41.8% identity (71.4% similar) in 91 aa overlap (1-91:1-91)
10 20 30 40 50 60
pF1KB8 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKD
::.: .. .:::: .:. ..: ::.::::: :.:::: :.. : :.:: ...
CCDS30 MTDLLRSVVTVIDVFYKYTKQDGECGTLSKGELKELLEKELHPVLKNPDDPDTVDVIMHM
10 20 30 40 50 60
70 80 90
pF1KB8 LDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
:: . : ..::.::.... .: ::.: . :
CCDS30 LDRDHDRRLDFTEFLLMIFKLTMACNKVLSKEYCKASGSKKHRRGHRHQEEESETEEDEE
70 80 90 100 110 120
CCDS30 DTPGHKSGYRHSSWSEGEEHGYSSGHSRGTVKCRHGSNSRRLGRQGNLSSSGNQEGSQKR
130 140 150 160 170 180
95 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:14:57 2016 done: Mon Nov 7 02:14:57 2016
Total Scan time: 1.380 Total Display time: -0.040
Function used was FASTA [36.3.4 Apr, 2011]