Result of FASTA (ccds) for
pFN21AB8371
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8371, 519 aa
1>>>pF1KB8371 519 - 519 aa - 519 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7383+/-0.00104; mu= 11.5031+/- 0.062
mean_var=117.4275+/-23.039, 0's: 0 Z-trim(106.8): 114 B-trim: 96 in 2/50
Lambda= 0.118356
statistics sampled from 9053 (9176) to 9053 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.282), width: 16
Scan time: 3.370
The best scores are: opt bits E(32554)
CCDS72860.1 PDZK1 gene_id:5174|Hs108|chr1 ( 519) 3389 590.2 1.9e-168
CCDS72859.1 PDZK1 gene_id:5174|Hs108|chr1 ( 408) 1705 302.6 5.6e-82
CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11 ( 505) 621 117.6 3.5e-26
CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11 ( 491) 439 86.5 7.7e-17
CCDS56300.1 DLG1 gene_id:1739|Hs108|chr3 ( 788) 327 67.5 6.4e-11
CCDS56301.1 DLG1 gene_id:1739|Hs108|chr3 ( 800) 327 67.5 6.5e-11
CCDS75072.1 DLG1 gene_id:1739|Hs108|chr3 ( 892) 327 67.5 7e-11
CCDS43194.1 DLG1 gene_id:1739|Hs108|chr3 ( 904) 327 67.5 7.1e-11
CCDS3327.1 DLG1 gene_id:1739|Hs108|chr3 ( 926) 327 67.5 7.3e-11
>>CCDS72860.1 PDZK1 gene_id:5174|Hs108|chr1 (519 aa)
initn: 3389 init1: 3389 opt: 3389 Z-score: 3137.8 bits: 590.2 E(32554): 1.9e-168
Smith-Waterman score: 3389; 100.0% identity (100.0% similar) in 519 aa overlap (1-519:1-519)
10 20 30 40 50 60
pF1KB8 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPAEKAGLQDGDRVLRING
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPAEKAGLQDGDRVLRING
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 VFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 IEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKETDKRHVEQKIQFKRETASLKLLPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 IEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKETDKRHVEQKIQFKRETASLKLLPHQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PRIVEMKKGSNGYGFYLRAGSEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PRIVEMKKGSNGYGFYLRAGSEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 HDSVVEMIRKGGDQTSLLVVDKETDNMYRLAHFSPFLYYQSQELPNGSVKEAPAPTPTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 HDSVVEMIRKGGDQTSLLVVDKETDNMYRLAHFSPFLYYQSQELPNGSVKEAPAPTPTSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 EVSSPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EVSSPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 DVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKAYDYFQAKKIPIVSSLADPLDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 DVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKAYDYFQAKKIPIVSSLADPLDT
430 440 450 460 470 480
490 500 510
pF1KB8 PPDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
:::::::::::::::::::::::::::::::::::::::
CCDS72 PPDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
490 500 510
>>CCDS72859.1 PDZK1 gene_id:5174|Hs108|chr1 (408 aa)
initn: 1668 init1: 1668 opt: 1705 Z-score: 1585.3 bits: 302.6 E(32554): 5.6e-82
Smith-Waterman score: 2441; 78.6% identity (78.6% similar) in 519 aa overlap (1-519:1-408)
10 20 30 40 50 60
pF1KB8 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPAEKAGLQDGDRVLRING
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPAEKAGLQDGDRVLRING
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 VFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHL
::::::::::::::::::::::::::::::::::
CCDS72 PVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQG--------------------------
130 140 150
190 200 210 220 230 240
pF1KB8 IEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKETDKRHVEQKIQFKRETASLKLLPHQ
CCDS72 ------------------------------------------------------------
250 260 270 280 290 300
pF1KB8 PRIVEMKKGSNGYGFYLRAGSEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLD
:::::::::::::::::::::::::::::::::::
CCDS72 -------------------------QIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLD
160 170 180
310 320 330 340 350 360
pF1KB8 HDSVVEMIRKGGDQTSLLVVDKETDNMYRLAHFSPFLYYQSQELPNGSVKEAPAPTPTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 HDSVVEMIRKGGDQTSLLVVDKETDNMYRLAHFSPFLYYQSQELPNGSVKEAPAPTPTSL
190 200 210 220 230 240
370 380 390 400 410 420
pF1KB8 EVSSPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EVSSPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDE
250 260 270 280 290 300
430 440 450 460 470 480
pF1KB8 DVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKAYDYFQAKKIPIVSSLADPLDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 DVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKAYDYFQAKKIPIVSSLADPLDT
310 320 330 340 350 360
490 500 510
pF1KB8 PPDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
:::::::::::::::::::::::::::::::::::::::
CCDS72 PPDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
370 380 390 400
>>CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11 (505 aa)
initn: 748 init1: 224 opt: 621 Z-score: 583.6 bits: 117.6 E(32554): 3.5e-26
Smith-Waterman score: 807; 36.0% identity (63.5% similar) in 430 aa overlap (7-431:47-455)
10 20 30
pF1KB8 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGHLVR
:: : :::.::...:: :. : ::.:
CCDS53 FKFNPKLGIDNPVLSLAEDHDPYDPWSLERPRFCLLSKEEGKSFGFHLQQELGRAGHVVC
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 VVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKAV
:. . :.. :::.:::.: .:. :..:.. :: .: :. : : :: ... :
CCDS53 RVDPGTSAQRQGLQEGDRILAVNNDVVEHEDYAVVVRRIRASSPRVLLTVLARHAHDVA-
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 KTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKK
:..: : : : :... ::. ::::..::. :..:::. ..:..
CCDS53 --RAQLGE-----------DAHLCPTLGPGVR----PRLCHIVKDEGGFGFSV--THGNQ
140 150 160 170
160 170 180 190 200 210
pF1KB8 GVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKET
: . .. :.: :::: .:.:::: .:: .:.....:. .::..: .:.. :.
CCDS53 GPFWLVLSTGGAAERAGVPPGARLLEVNGVSVEKFTHNQLTRKLWQSGQQVTLLVAGPEV
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 DKRHVEQKIQFKRETASLKLLPHQPRIVEMKKGSNGYGFYLRA--GSEQK-GQIIKDIDS
... . . . : :: .:: ....:: .:.:: :: : . . ::.. ..:
CCDS53 EEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDP
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 GSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRKGGDQTSLLVVDKETDNMYRLAHF
: ::..::.. .: .::: ::::: : :. .: :. :. .:: ::: :.: .. ....
CCDS53 GLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPEADRFFSMVRL
300 310 320 330 340 350
340 350 360 370 380 390
pF1KB8 SPFLYYQSQELPNGSVKEAPAPTPTSLEVSSPPDTT-EEVDHKPKLCRLAKGENG-YGFH
::.:. .. : : .: . . . . . : : ::. : . : : : .: :::.
CCDS53 SPLLFLENTEAP-ASPRGSSSASLVETEDPSLEDTSVPSVPLGSRQCFLYPGPGGSYGFR
360 370 380 390 400 410
400 410 420 430 440 450
pF1KB8 LNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVT
:. . . : ::..: :: : :::. :::.:::: :
CCDS53 LSCVASGPRLFISQVTPGGSAARAGLQVGDVILEVNGYPVGGQNDLERLQQLPEAEPPLC
420 430 440 450 460 470
460 470 480 490 500 510
pF1KB8 LLVCGKKAYDYFQAKKIPIVSSLADPLDTPPDSKEGIVVESNHDSHMAKERAHSTASHSS
CCDS53 LKLAARSLRGLEAWIPPGAAEDWALASDLL
480 490 500
>>CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11 (491 aa)
initn: 728 init1: 224 opt: 439 Z-score: 415.8 bits: 86.5 E(32554): 7.7e-17
Smith-Waterman score: 743; 35.1% identity (60.9% similar) in 430 aa overlap (7-431:47-441)
10 20 30
pF1KB8 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGHLVR
:: : :::.::...:: :. : ::.:
CCDS84 FKFNPKLGIDNPVLSLAEDHDPYDPWSLERPRFCLLSKEEGKSFGFHLQQELGRAGHVVC
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 VVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKAV
:. . :.. :::.:::.: .:. :..:.. :: .: :. : : :: ... :
CCDS84 RVDPGTSAQRQGLQEGDRILAVNNDVVEHEDYAVVVRRIRASSPRVLLTVLARHAHDVA-
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 KTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKK
:..: : : : :... ::. ::::..::. :..:::. ..:..
CCDS84 --RAQLGE-----------DAHLCPTLGPGVR----PRLCHIVKDEGGFGFSV--THGNQ
140 150 160 170
160 170 180 190 200 210
pF1KB8 GVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKET
: . .. :.: :::: .:.:::: . .::..: .:.. :.
CCDS84 GPFWLVLSTGGAAERAGVPPGARLLEVNG--------------LWQSGQQVTLLVAGPEV
180 190 200 210 220
220 230 240 250 260 270
pF1KB8 DKRHVEQKIQFKRETASLKLLPHQPRIVEMKKGSNGYGFYLRA--GSEQK-GQIIKDIDS
... . . . : :: .:: ....:: .:.:: :: : . . ::.. ..:
CCDS84 EEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDP
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB8 GSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRKGGDQTSLLVVDKETDNMYRLAHF
: ::..::.. .: .::: ::::: : :. .: :. :. .:: ::: :.: .. ....
CCDS84 GLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPEADRFFSMVRL
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB8 SPFLYYQSQELPNGSVKEAPAPTPTSLEVSSPPDTT-EEVDHKPKLCRLAKGENG-YGFH
::.:. .. : : .: . . . . . : : ::. : . : : : .: :::.
CCDS84 SPLLFLENTEAP-ASPRGSSSASLVETEDPSLEDTSVPSVPLGSRQCFLYPGPGGSYGFR
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB8 LNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVT
:. . . : ::..: :: : :::. :::.:::: :
CCDS84 LSCVASGPRLFISQVTPGGSAARAGLQVGDVILEVNGYPVGGQNDLERLQQLPEAEPPLC
410 420 430 440 450 460
460 470 480 490 500 510
pF1KB8 LLVCGKKAYDYFQAKKIPIVSSLADPLDTPPDSKEGIVVESNHDSHMAKERAHSTASHSS
CCDS84 LKLAARSLRGLEAWIPPGAAEDWALASDLL
470 480 490
>>CCDS56300.1 DLG1 gene_id:1739|Hs108|chr3 (788 aa)
initn: 204 init1: 117 opt: 327 Z-score: 309.5 bits: 67.5 E(32554): 6.4e-11
Smith-Waterman score: 338; 25.3% identity (58.1% similar) in 375 aa overlap (115-466:88-440)
90 100 110 120 130 140
pF1KB8 LVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGS
.:.. .:.. .:... . . : . ...
CCDS56 AFFTRRHSFIDCISVATSSTQANPPPVLVNTDSLETPTYVNGTDADYEYEEITLERGNSG
60 70 80 90 100 110
150 160 170 180 190
pF1KB8 YGFSLKT------VQGKKGVYMTDITPQGVAMRAGVL-ADDHLIEVNGENVEDASHEEVV
:::. . .....: : :.: . : : ..: ...:: .:.:..: ..:
CCDS56 LGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAV
120 130 140 150 160 170
200 210 220 230 240 250
pF1KB8 EKVKKSGSRVMFLLVDKETDKRHVEQKIQFKRETASLKLLPHQPRIVEMKKGSNGYGFYL
: .:..:: .. : : :: :. .: :.. ... :: .: :: .
CCDS56 EALKEAGS-IVRLYV-----KR---------RKPVSEKIME-----IKLIKGPKGLGFSI
180 190 200 210
260 270 280 290 300 310
pF1KB8 RAG-------SEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRK
.: .... . : :..:. ... :. .: ..:::. .: . :. .: ...
CCDS56 AGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVCLEEVTHEEAVTALKN
220 230 240 250 260 270
320 330 340 350 360
pF1KB8 GGDQTSLLVVDKETDNMYRLAHFSP--FLYYQSQEL-----PNGSVKEAPAPTPTSLEVS
.: . : :. : : .:: ..: . .:: . :.. . ..:: ::
CCDS56 TSDFVYLKVA-KPT-SMYMNDGYAPPDITNSSSQPVDNHVSPSSFLGQTPASPARYSPVS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB8 SPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDV
. .:. ..:. : .: .: ::.. . . : ::. . ::::::.: :. :
CCDS56 KAVLGDDEITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDR
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB8 IIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGK-KAYDYFQAKKIPIVSSLADPLDTP
:: ::.:.. .:... ....:. ::... . . :. :.::
CCDS56 IISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRFEAKIHDLREQMMNSSISS
400 410 420 430 440 450
490 500 510
pF1KB8 PDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
CCDS56 GSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINASDDEWWQARQVTP
460 470 480 490 500 510
>>CCDS56301.1 DLG1 gene_id:1739|Hs108|chr3 (800 aa)
initn: 117 init1: 117 opt: 327 Z-score: 309.5 bits: 67.5 E(32554): 6.5e-11
Smith-Waterman score: 338; 25.3% identity (58.1% similar) in 375 aa overlap (115-466:88-440)
90 100 110 120 130 140
pF1KB8 LVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGS
.:.. .:.. .:... . . : . ...
CCDS56 AFFTRRHSFIDCISVATSSTQANPPPVLVNTDSLETPTYVNGTDADYEYEEITLERGNSG
60 70 80 90 100 110
150 160 170 180 190
pF1KB8 YGFSLKT------VQGKKGVYMTDITPQGVAMRAGVL-ADDHLIEVNGENVEDASHEEVV
:::. . .....: : :.: . : : ..: ...:: .:.:..: ..:
CCDS56 LGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAV
120 130 140 150 160 170
200 210 220 230 240 250
pF1KB8 EKVKKSGSRVMFLLVDKETDKRHVEQKIQFKRETASLKLLPHQPRIVEMKKGSNGYGFYL
: .:..:: .. : : :: :. .: :.. ... :: .: :: .
CCDS56 EALKEAGS-IVRLYV-----KR---------RKPVSEKIME-----IKLIKGPKGLGFSI
180 190 200 210
260 270 280 290 300 310
pF1KB8 RAG-------SEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRK
.: .... . : :..:. ... :. .: ..:::. .: . :. .: ...
CCDS56 AGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVCLEEVTHEEAVTALKN
220 230 240 250 260 270
320 330 340 350 360
pF1KB8 GGDQTSLLVVDKETDNMYRLAHFSP--FLYYQSQEL-----PNGSVKEAPAPTPTSLEVS
.: . : :. : : .:: ..: . .:: . :.. . ..:: ::
CCDS56 TSDFVYLKVA-KPT-SMYMNDGYAPPDITNSSSQPVDNHVSPSSFLGQTPASPARYSPVS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB8 SPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDV
. .:. ..:. : .: .: ::.. . . : ::. . ::::::.: :. :
CCDS56 KAVLGDDEITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDR
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB8 IIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGK-KAYDYFQAKKIPIVSSLADPLDTP
:: ::.:.. .:... ....:. ::... . . :. :.::
CCDS56 IISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRFEAKIHDLREQMMNSSISS
400 410 420 430 440 450
490 500 510
pF1KB8 PDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
CCDS56 GSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINASDDEWWQARQVTP
460 470 480 490 500 510
>>CCDS75072.1 DLG1 gene_id:1739|Hs108|chr3 (892 aa)
initn: 204 init1: 117 opt: 327 Z-score: 308.8 bits: 67.5 E(32554): 7e-11
Smith-Waterman score: 338; 25.3% identity (58.1% similar) in 375 aa overlap (115-466:171-523)
90 100 110 120 130 140
pF1KB8 LVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGS
.:.. .:.. .:... . . : . ...
CCDS75 NLSEIENVHGFVSHSHISPIKANPPPVLVNTDSLETPTYVNGTDADYEYEEITLERGNSG
150 160 170 180 190 200
150 160 170 180 190
pF1KB8 YGFSLKT------VQGKKGVYMTDITPQGVAMRAGVL-ADDHLIEVNGENVEDASHEEVV
:::. . .....: : :.: . : : ..: ...:: .:.:..: ..:
CCDS75 LGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAV
210 220 230 240 250 260
200 210 220 230 240 250
pF1KB8 EKVKKSGSRVMFLLVDKETDKRHVEQKIQFKRETASLKLLPHQPRIVEMKKGSNGYGFYL
: .:..:: .. : : :: :. .: :.. ... :: .: :: .
CCDS75 EALKEAGS-IVRLYV-----KR---------RKPVSEKIME-----IKLIKGPKGLGFSI
270 280 290 300
260 270 280 290 300 310
pF1KB8 RAG-------SEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRK
.: .... . : :..:. ... :. .: ..:::. .: . :. .: ...
CCDS75 AGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVCLEEVTHEEAVTALKN
310 320 330 340 350 360
320 330 340 350 360
pF1KB8 GGDQTSLLVVDKETDNMYRLAHFSP--FLYYQSQEL-----PNGSVKEAPAPTPTSLEVS
.: . : :. : : .:: ..: . .:: . :.. . ..:: ::
CCDS75 TSDFVYLKVA-KPT-SMYMNDGYAPPDITNSSSQPVDNHVSPSSFLGQTPASPARYSPVS
370 380 390 400 410
370 380 390 400 410 420
pF1KB8 SPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDV
. .:. ..:. : .: .: ::.. . . : ::. . ::::::.: :. :
CCDS75 KAVLGDDEITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDR
420 430 440 450 460 470
430 440 450 460 470 480
pF1KB8 IIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGK-KAYDYFQAKKIPIVSSLADPLDTP
:: ::.:.. .:... ....:. ::... . . :. :.::
CCDS75 IISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRFEAKIHDLREQMMNSSISS
480 490 500 510 520 530
490 500 510
pF1KB8 PDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
CCDS75 GSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINASDDEWWQARQVTP
540 550 560 570 580 590
>>CCDS43194.1 DLG1 gene_id:1739|Hs108|chr3 (904 aa)
initn: 147 init1: 117 opt: 327 Z-score: 308.7 bits: 67.5 E(32554): 7.1e-11
Smith-Waterman score: 338; 25.3% identity (58.1% similar) in 375 aa overlap (115-466:204-556)
90 100 110 120 130 140
pF1KB8 LVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGS
.:.. .:.. .:... . . : . ...
CCDS43 PVIPVLPVPAENTVILPTIPQANPPPVLVNTDSLETPTYVNGTDADYEYEEITLERGNSG
180 190 200 210 220 230
150 160 170 180 190
pF1KB8 YGFSLKT------VQGKKGVYMTDITPQGVAMRAGVL-ADDHLIEVNGENVEDASHEEVV
:::. . .....: : :.: . : : ..: ...:: .:.:..: ..:
CCDS43 LGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAV
240 250 260 270 280 290
200 210 220 230 240 250
pF1KB8 EKVKKSGSRVMFLLVDKETDKRHVEQKIQFKRETASLKLLPHQPRIVEMKKGSNGYGFYL
: .:..:: .. : : :: :. .: :.. ... :: .: :: .
CCDS43 EALKEAGS-IVRLYV-----KR---------RKPVSEKIME-----IKLIKGPKGLGFSI
300 310 320 330
260 270 280 290 300 310
pF1KB8 RAG-------SEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRK
.: .... . : :..:. ... :. .: ..:::. .: . :. .: ...
CCDS43 AGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVCLEEVTHEEAVTALKN
340 350 360 370 380 390
320 330 340 350 360
pF1KB8 GGDQTSLLVVDKETDNMYRLAHFSP--FLYYQSQEL-----PNGSVKEAPAPTPTSLEVS
.: . : :. : : .:: ..: . .:: . :.. . ..:: ::
CCDS43 TSDFVYLKVA-KPT-SMYMNDGYAPPDITNSSSQPVDNHVSPSSFLGQTPASPARYSPVS
400 410 420 430 440 450
370 380 390 400 410 420
pF1KB8 SPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDV
. .:. ..:. : .: .: ::.. . . : ::. . ::::::.: :. :
CCDS43 KAVLGDDEITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDR
460 470 480 490 500 510
430 440 450 460 470 480
pF1KB8 IIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGK-KAYDYFQAKKIPIVSSLADPLDTP
:: ::.:.. .:... ....:. ::... . . :. :.::
CCDS43 IISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRFEAKIHDLREQMMNSSISS
520 530 540 550 560 570
490 500 510
pF1KB8 PDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
CCDS43 GSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINASDDEWWQARQVTP
580 590 600 610 620 630
>>CCDS3327.1 DLG1 gene_id:1739|Hs108|chr3 (926 aa)
initn: 147 init1: 117 opt: 327 Z-score: 308.5 bits: 67.5 E(32554): 7.3e-11
Smith-Waterman score: 338; 25.3% identity (58.1% similar) in 375 aa overlap (115-466:204-556)
90 100 110 120 130 140
pF1KB8 LVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGS
.:.. .:.. .:... . . : . ...
CCDS33 PVIPVLPVPAENTVILPTIPQANPPPVLVNTDSLETPTYVNGTDADYEYEEITLERGNSG
180 190 200 210 220 230
150 160 170 180 190
pF1KB8 YGFSLKT------VQGKKGVYMTDITPQGVAMRAGVL-ADDHLIEVNGENVEDASHEEVV
:::. . .....: : :.: . : : ..: ...:: .:.:..: ..:
CCDS33 LGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAV
240 250 260 270 280 290
200 210 220 230 240 250
pF1KB8 EKVKKSGSRVMFLLVDKETDKRHVEQKIQFKRETASLKLLPHQPRIVEMKKGSNGYGFYL
: .:..:: .. : : :: :. .: :.. ... :: .: :: .
CCDS33 EALKEAGS-IVRLYV-----KR---------RKPVSEKIME-----IKLIKGPKGLGFSI
300 310 320 330
260 270 280 290 300 310
pF1KB8 RAG-------SEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRK
.: .... . : :..:. ... :. .: ..:::. .: . :. .: ...
CCDS33 AGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVCLEEVTHEEAVTALKN
340 350 360 370 380 390
320 330 340 350 360
pF1KB8 GGDQTSLLVVDKETDNMYRLAHFSP--FLYYQSQEL-----PNGSVKEAPAPTPTSLEVS
.: . : :. : : .:: ..: . .:: . :.. . ..:: ::
CCDS33 TSDFVYLKVA-KPT-SMYMNDGYAPPDITNSSSQPVDNHVSPSSFLGQTPASPARYSPVS
400 410 420 430 440 450
370 380 390 400 410 420
pF1KB8 SPPDTTEEVDHKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDV
. .:. ..:. : .: .: ::.. . . : ::. . ::::::.: :. :
CCDS33 KAVLGDDEITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDR
460 470 480 490 500 510
430 440 450 460 470 480
pF1KB8 IIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGK-KAYDYFQAKKIPIVSSLADPLDTP
:: ::.:.. .:... ....:. ::... . . :. :.::
CCDS33 IISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRFEAKIHDLREQMMNSSISS
520 530 540 550 560 570
490 500 510
pF1KB8 PDSKEGIVVESNHDSHMAKERAHSTASHSSSNSEDTEM
CCDS33 GSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINASDDEWWQARQVTP
580 590 600 610 620 630
519 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:42:10 2016 done: Mon Nov 7 03:42:11 2016
Total Scan time: 3.370 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]