Result of FASTA (omim) for
pFN21AB8350
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8350, 266 aa
1>>>pF1KB8350 266 - 266 aa - 266 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9779+/-0.000419; mu= 9.6632+/- 0.026
mean_var=302.5740+/-66.546, 0's: 0 Z-trim(120.7): 1595 B-trim: 1387 in 1/56
Lambda= 0.073732
statistics sampled from 34251 (36349) to 34251 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.426), width: 16
Scan time: 7.850
The best scores are: opt bits E(85289)
XP_006712005 (OMIM: 608891) PREDICTED: protein odd ( 266) 1856 210.4 2.7e-54
NP_660303 (OMIM: 608891) protein odd-skipped-relat ( 266) 1856 210.4 2.7e-54
NP_443727 (OMIM: 611297) protein odd-skipped-relat ( 276) 1230 143.9 3.1e-34
XP_005250835 (OMIM: 611297) PREDICTED: protein odd ( 397) 1230 144.1 3.7e-34
NP_001135934 (OMIM: 611297) protein odd-skipped-re ( 312) 1224 143.3 5.1e-34
XP_016868507 (OMIM: 611297) PREDICTED: protein odd ( 312) 1224 143.3 5.1e-34
XP_011515129 (OMIM: 611297) PREDICTED: protein odd ( 312) 1224 143.3 5.1e-34
XP_011515128 (OMIM: 611297) PREDICTED: protein odd ( 365) 1224 143.4 5.5e-34
XP_011515127 (OMIM: 611297) PREDICTED: protein odd ( 369) 1224 143.4 5.6e-34
NP_001273770 (OMIM: 611297) protein odd-skipped-re ( 433) 1224 143.5 6e-34
NP_008896 (OMIM: 194534) zinc finger protein 24 is ( 368) 374 53.0 9.2e-07
XP_005258398 (OMIM: 194534) PREDICTED: zinc finger ( 368) 374 53.0 9.2e-07
NP_001311096 (OMIM: 194539) zinc finger protein 32 ( 248) 327 47.7 2.4e-05
NP_001311095 (OMIM: 194539) zinc finger protein 32 ( 248) 327 47.7 2.4e-05
NP_001311097 (OMIM: 194539) zinc finger protein 32 ( 248) 327 47.7 2.4e-05
NP_001311279 (OMIM: 601069) zinc finger protein 23 ( 458) 331 48.6 2.4e-05
XP_011538540 (OMIM: 601069) PREDICTED: zinc finger ( 458) 331 48.6 2.4e-05
NP_001311280 (OMIM: 601069) zinc finger protein 23 ( 458) 331 48.6 2.4e-05
NP_001311276 (OMIM: 601069) zinc finger protein 23 ( 458) 331 48.6 2.4e-05
NP_001311277 (OMIM: 601069) zinc finger protein 23 ( 458) 331 48.6 2.4e-05
NP_001311278 (OMIM: 601069) zinc finger protein 23 ( 458) 331 48.6 2.4e-05
NP_001092753 (OMIM: 601069) zinc finger protein 23 ( 458) 331 48.6 2.4e-05
NP_005665 (OMIM: 601069) zinc finger protein 239 i ( 458) 331 48.6 2.4e-05
XP_006718066 (OMIM: 601069) PREDICTED: zinc finger ( 458) 331 48.6 2.4e-05
NP_001092752 (OMIM: 601069) zinc finger protein 23 ( 458) 331 48.6 2.4e-05
XP_005271889 (OMIM: 601069) PREDICTED: zinc finger ( 458) 331 48.6 2.4e-05
NP_001092754 (OMIM: 601069) zinc finger protein 23 ( 458) 331 48.6 2.4e-05
NP_001005368 (OMIM: 194539) zinc finger protein 32 ( 273) 327 47.8 2.5e-05
XP_016872105 (OMIM: 194539) PREDICTED: zinc finger ( 273) 327 47.8 2.5e-05
NP_008904 (OMIM: 194539) zinc finger protein 32 is ( 273) 327 47.8 2.5e-05
NP_001311094 (OMIM: 194539) zinc finger protein 32 ( 277) 327 47.8 2.5e-05
NP_001311093 (OMIM: 194539) zinc finger protein 32 ( 277) 327 47.8 2.5e-05
XP_011538538 (OMIM: 601069) PREDICTED: zinc finger ( 500) 331 48.7 2.6e-05
NP_001311281 (OMIM: 601069) zinc finger protein 23 ( 500) 331 48.7 2.6e-05
XP_016872229 (OMIM: 601069) PREDICTED: zinc finger ( 500) 331 48.7 2.6e-05
XP_011538537 (OMIM: 601069) PREDICTED: zinc finger ( 500) 331 48.7 2.6e-05
XP_006718064 (OMIM: 601069) PREDICTED: zinc finger ( 500) 331 48.7 2.6e-05
XP_011538536 (OMIM: 601069) PREDICTED: zinc finger ( 500) 331 48.7 2.6e-05
XP_011538539 (OMIM: 601069) PREDICTED: zinc finger ( 500) 331 48.7 2.6e-05
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364) 328 48.1 2.7e-05
NP_001311282 (OMIM: 601069) zinc finger protein 23 ( 571) 331 48.7 2.7e-05
NP_001243454 (OMIM: 194548) zinc finger protein 74 ( 573) 331 48.7 2.7e-05
XP_011538534 (OMIM: 601069) PREDICTED: zinc finger ( 602) 331 48.8 2.8e-05
NP_003417 (OMIM: 194548) zinc finger protein 74 is ( 644) 331 48.8 2.9e-05
NP_001243453 (OMIM: 194548) zinc finger protein 74 ( 644) 331 48.8 2.9e-05
XP_011526007 (OMIM: 603980) PREDICTED: zinc finger ( 531) 329 48.5 3.1e-05
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474) 328 48.3 3.1e-05
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474) 328 48.3 3.1e-05
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474) 328 48.3 3.1e-05
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474) 328 48.3 3.1e-05
>>XP_006712005 (OMIM: 608891) PREDICTED: protein odd-ski (266 aa)
initn: 1856 init1: 1856 opt: 1856 Z-score: 1095.7 bits: 210.4 E(85289): 2.7e-54
Smith-Waterman score: 1856; 100.0% identity (100.0% similar) in 266 aa overlap (1-266:1-266)
10 20 30 40 50 60
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AMHLPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPALKTKPRFDFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AMHLPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPALKTKPRFDFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NLALAATQEDPAKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NLALAATQEDPAKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF
190 200 210 220 230 240
250 260
pF1KB8 CQSRTLAVHKTLHSQVKELKTSKIKC
::::::::::::::::::::::::::
XP_006 CQSRTLAVHKTLHSQVKELKTSKIKC
250 260
>>NP_660303 (OMIM: 608891) protein odd-skipped-related 1 (266 aa)
initn: 1856 init1: 1856 opt: 1856 Z-score: 1095.7 bits: 210.4 E(85289): 2.7e-54
Smith-Waterman score: 1856; 100.0% identity (100.0% similar) in 266 aa overlap (1-266:1-266)
10 20 30 40 50 60
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_660 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AMHLPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPALKTKPRFDFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_660 AMHLPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPALKTKPRFDFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NLALAATQEDPAKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_660 NLALAATQEDPAKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_660 GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF
190 200 210 220 230 240
250 260
pF1KB8 CQSRTLAVHKTLHSQVKELKTSKIKC
::::::::::::::::::::::::::
NP_660 CQSRTLAVHKTLHSQVKELKTSKIKC
250 260
>>NP_443727 (OMIM: 611297) protein odd-skipped-related 2 (276 aa)
initn: 1230 init1: 711 opt: 1230 Z-score: 735.7 bits: 143.9 E(85289): 3.1e-34
Smith-Waterman score: 1230; 66.8% identity (84.3% similar) in 274 aa overlap (1-266:1-265)
10 20 30 40 50 60
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP
::::.::::.:.:::::::::::::::: .:.. ::: .:::.::....:...::::::
NP_443 MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPAT-VDHLQGLYGLSAVQTMHMNHWTLGYP
10 20 30 40 50
70 80 90 100 110
pF1KB8 AMH-LPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPAL-KTKPRFD
.: . ::..... .....:::::: .::.:. :...:: : .::: : .::::
NP_443 NVHEITRSTITEM-AAAQGLVDARFPFPALPFTTHLFHPKQGAIAH-VLPALHKDRPRFD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 FANLALAATQEDPAKLGR----GEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKE
:::::.::::::: :.: . : ::: .:: .::.:..::.:::::::::::
NP_443 FANLAVAATQEDPPKMGDLSKLSPGLGSPISGL------SKLTPDRKPSRGRLPSKTKKE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 FVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ
180 190 200 210 220 230
240 250 260
pF1KB8 ECGKGFCQSRTLAVHKTLHSQVKE--LKTSKIKC
::::::::::::::::::: :.. .: ::
NP_443 ECGKGFCQSRTLAVHKTLHMQTSSPTAASSAAKCSGETVICGGTA
240 250 260 270
>>XP_005250835 (OMIM: 611297) PREDICTED: protein odd-ski (397 aa)
initn: 1230 init1: 711 opt: 1230 Z-score: 734.2 bits: 144.1 E(85289): 3.7e-34
Smith-Waterman score: 1230; 66.8% identity (84.3% similar) in 274 aa overlap (1-266:122-386)
10 20 30
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGL
::::.::::.:.:::::::::::::::: .
XP_005 HWVFVGAPRPPASDSWKKGLVPSAPPASRKMGSKALPAPIPLHPSLQLTNYSFLQAVNTF
100 110 120 130 140 150
40 50 60 70 80
pF1KB8 PTVPSDHLPNLYGFSALHAVHLHQWTLGYPAMH-LPRSSFSKVPGTVSSLVDARFQLPAF
:.. ::: .:::.::....:...:::::: .: . ::..... .....:::::: .::.
XP_005 PAT-VDHLQGLYGLSAVQTMHMNHWTLGYPNVHEITRSTITEM-AAAQGLVDARFPFPAL
160 170 180 190 200
90 100 110 120 130 140
pF1KB8 PWFPHVIQPKPEITAGGSVPAL-KTKPRFDFANLALAATQEDPAKLGR----GEGPGSPA
:. :...:: : .::: : .:::::::::.::::::: :.: . : :::
XP_005 PFTTHLFHPKQGAIAH-VLPALHKDRPRFDFANLAVAATQEDPPKMGDLSKLSPGLGSPI
210 220 230 240 250 260
150 160 170 180 190 200
pF1KB8 GGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFCGRHFTKSYNLLIHERTHTDERPYT
.:: .::.:..::.::::::::::::.::::::::::::::::::::::::::::
XP_005 SGL------SKLTPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT
270 280 290 300 310 320
210 220 230 240 250 260
pF1KB8 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHSQVKE--LKTS
::::::::::::::::::::::::::::::::::::::::::::::::: :.. .:
XP_005 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAASS
330 340 350 360 370 380
pF1KB8 KIKC
::
XP_005 AAKCSGETVICGGTA
390
>>NP_001135934 (OMIM: 611297) protein odd-skipped-relate (312 aa)
initn: 1230 init1: 711 opt: 1224 Z-score: 731.7 bits: 143.3 E(85289): 5.1e-34
Smith-Waterman score: 1224; 69.0% identity (86.2% similar) in 261 aa overlap (1-255:1-252)
10 20 30 40 50 60
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP
::::.::::.:.:::::::::::::::: .:.. ::: .:::.::....:...::::::
NP_001 MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPAT-VDHLQGLYGLSAVQTMHMNHWTLGYP
10 20 30 40 50
70 80 90 100 110
pF1KB8 AMH-LPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPAL-KTKPRFD
.: . ::..... .....:::::: .::.:. :...:: : .::: : .::::
NP_001 NVHEITRSTITEM-AAAQGLVDARFPFPALPFTTHLFHPKQGAIAH-VLPALHKDRPRFD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 FANLALAATQEDPAKLGR----GEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKE
:::::.::::::: :.: . : ::: .:: .::.:..::.:::::::::::
NP_001 FANLAVAATQEDPPKMGDLSKLSPGLGSPISGL------SKLTPDRKPSRGRLPSKTKKE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 FVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ
180 190 200 210 220 230
240 250 260
pF1KB8 ECGKGFCQSRTLAVHKTLHSQVKELKTSKIKC
::::::::::::::::::: :
NP_001 ECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHTDIKPYSCEQCGK
240 250 260 270 280 290
>>XP_016868507 (OMIM: 611297) PREDICTED: protein odd-ski (312 aa)
initn: 1230 init1: 711 opt: 1224 Z-score: 731.7 bits: 143.3 E(85289): 5.1e-34
Smith-Waterman score: 1224; 69.0% identity (86.2% similar) in 261 aa overlap (1-255:1-252)
10 20 30 40 50 60
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP
::::.::::.:.:::::::::::::::: .:.. ::: .:::.::....:...::::::
XP_016 MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPAT-VDHLQGLYGLSAVQTMHMNHWTLGYP
10 20 30 40 50
70 80 90 100 110
pF1KB8 AMH-LPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPAL-KTKPRFD
.: . ::..... .....:::::: .::.:. :...:: : .::: : .::::
XP_016 NVHEITRSTITEM-AAAQGLVDARFPFPALPFTTHLFHPKQGAIAH-VLPALHKDRPRFD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 FANLALAATQEDPAKLGR----GEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKE
:::::.::::::: :.: . : ::: .:: .::.:..::.:::::::::::
XP_016 FANLAVAATQEDPPKMGDLSKLSPGLGSPISGL------SKLTPDRKPSRGRLPSKTKKE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 FVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ
180 190 200 210 220 230
240 250 260
pF1KB8 ECGKGFCQSRTLAVHKTLHSQVKELKTSKIKC
::::::::::::::::::: :
XP_016 ECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHTDIKPYSCEQCGK
240 250 260 270 280 290
>>XP_011515129 (OMIM: 611297) PREDICTED: protein odd-ski (312 aa)
initn: 1230 init1: 711 opt: 1224 Z-score: 731.7 bits: 143.3 E(85289): 5.1e-34
Smith-Waterman score: 1224; 69.0% identity (86.2% similar) in 261 aa overlap (1-255:1-252)
10 20 30 40 50 60
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP
::::.::::.:.:::::::::::::::: .:.. ::: .:::.::....:...::::::
XP_011 MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPAT-VDHLQGLYGLSAVQTMHMNHWTLGYP
10 20 30 40 50
70 80 90 100 110
pF1KB8 AMH-LPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPAL-KTKPRFD
.: . ::..... .....:::::: .::.:. :...:: : .::: : .::::
XP_011 NVHEITRSTITEM-AAAQGLVDARFPFPALPFTTHLFHPKQGAIAH-VLPALHKDRPRFD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 FANLALAATQEDPAKLGR----GEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKE
:::::.::::::: :.: . : ::: .:: .::.:..::.:::::::::::
XP_011 FANLAVAATQEDPPKMGDLSKLSPGLGSPISGL------SKLTPDRKPSRGRLPSKTKKE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 FVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ
180 190 200 210 220 230
240 250 260
pF1KB8 ECGKGFCQSRTLAVHKTLHSQVKELKTSKIKC
::::::::::::::::::: :
XP_011 ECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHTDIKPYSCEQCGK
240 250 260 270 280 290
>>XP_011515128 (OMIM: 611297) PREDICTED: protein odd-ski (365 aa)
initn: 1230 init1: 711 opt: 1224 Z-score: 731.1 bits: 143.4 E(85289): 5.5e-34
Smith-Waterman score: 1224; 69.0% identity (86.2% similar) in 261 aa overlap (1-255:54-305)
10 20 30
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGL
::::.::::.:.:::::::::::::::: .
XP_011 HWVFVGAPRPPASDSWKKGLVPSAPPASRKMGSKALPAPIPLHPSLQLTNYSFLQAVNTF
30 40 50 60 70 80
40 50 60 70 80
pF1KB8 PTVPSDHLPNLYGFSALHAVHLHQWTLGYPAMH-LPRSSFSKVPGTVSSLVDARFQLPAF
:.. ::: .:::.::....:...:::::: .: . ::..... .....:::::: .::.
XP_011 PAT-VDHLQGLYGLSAVQTMHMNHWTLGYPNVHEITRSTITEM-AAAQGLVDARFPFPAL
90 100 110 120 130 140
90 100 110 120 130 140
pF1KB8 PWFPHVIQPKPEITAGGSVPAL-KTKPRFDFANLALAATQEDPAKLGR----GEGPGSPA
:. :...:: : .::: : .:::::::::.::::::: :.: . : :::
XP_011 PFTTHLFHPKQGAIAH-VLPALHKDRPRFDFANLAVAATQEDPPKMGDLSKLSPGLGSPI
150 160 170 180 190 200
150 160 170 180 190 200
pF1KB8 GGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFCGRHFTKSYNLLIHERTHTDERPYT
.:: .::.:..::.::::::::::::.::::::::::::::::::::::::::::
XP_011 SGL------SKLTPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT
210 220 230 240 250
210 220 230 240 250 260
pF1KB8 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHSQVKELKTSKI
::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_011 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTC
260 270 280 290 300 310
pF1KB8 KC
XP_011 GRTFNQRSNLKTHLLTHTDIKPYSCEQCGKVFRRNCDLRRHSLTHTPRQDF
320 330 340 350 360
>>XP_011515127 (OMIM: 611297) PREDICTED: protein odd-ski (369 aa)
initn: 1230 init1: 711 opt: 1224 Z-score: 731.0 bits: 143.4 E(85289): 5.6e-34
Smith-Waterman score: 1224; 69.0% identity (86.2% similar) in 261 aa overlap (1-255:58-309)
10 20 30
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGL
::::.::::.:.:::::::::::::::: .
XP_011 HWVFVGAPRPPASDSWKKGLVPSAPPASRKMGSKALPAPIPLHPSLQLTNYSFLQAVNTF
30 40 50 60 70 80
40 50 60 70 80
pF1KB8 PTVPSDHLPNLYGFSALHAVHLHQWTLGYPAMH-LPRSSFSKVPGTVSSLVDARFQLPAF
:.. ::: .:::.::....:...:::::: .: . ::..... .....:::::: .::.
XP_011 PAT-VDHLQGLYGLSAVQTMHMNHWTLGYPNVHEITRSTITEM-AAAQGLVDARFPFPAL
90 100 110 120 130 140
90 100 110 120 130 140
pF1KB8 PWFPHVIQPKPEITAGGSVPAL-KTKPRFDFANLALAATQEDPAKLGR----GEGPGSPA
:. :...:: : .::: : .:::::::::.::::::: :.: . : :::
XP_011 PFTTHLFHPKQGAIAH-VLPALHKDRPRFDFANLAVAATQEDPPKMGDLSKLSPGLGSPI
150 160 170 180 190 200
150 160 170 180 190 200
pF1KB8 GGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFCGRHFTKSYNLLIHERTHTDERPYT
.:: .::.:..::.::::::::::::.::::::::::::::::::::::::::::
XP_011 SGL------SKLTPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT
210 220 230 240 250
210 220 230 240 250 260
pF1KB8 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHSQVKELKTSKI
::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_011 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTC
260 270 280 290 300 310
pF1KB8 KC
XP_011 GRTFNQRSNLKTHLLTHTDIKPYSCEQCGKVFRRNCDLRRHSLTHTPRQDF
320 330 340 350 360
>>NP_001273770 (OMIM: 611297) protein odd-skipped-relate (433 aa)
initn: 1230 init1: 711 opt: 1224 Z-score: 730.4 bits: 143.5 E(85289): 6e-34
Smith-Waterman score: 1224; 69.0% identity (86.2% similar) in 261 aa overlap (1-255:122-373)
10 20 30
pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGL
::::.::::.:.:::::::::::::::: .
NP_001 HWVFVGAPRPPASDSWKKGLVPSAPPASRKMGSKALPAPIPLHPSLQLTNYSFLQAVNTF
100 110 120 130 140 150
40 50 60 70 80
pF1KB8 PTVPSDHLPNLYGFSALHAVHLHQWTLGYPAMH-LPRSSFSKVPGTVSSLVDARFQLPAF
:.. ::: .:::.::....:...:::::: .: . ::..... .....:::::: .::.
NP_001 PAT-VDHLQGLYGLSAVQTMHMNHWTLGYPNVHEITRSTITEM-AAAQGLVDARFPFPAL
160 170 180 190 200
90 100 110 120 130 140
pF1KB8 PWFPHVIQPKPEITAGGSVPAL-KTKPRFDFANLALAATQEDPAKLGR----GEGPGSPA
:. :...:: : .::: : .:::::::::.::::::: :.: . : :::
NP_001 PFTTHLFHPKQGAIAH-VLPALHKDRPRFDFANLAVAATQEDPPKMGDLSKLSPGLGSPI
210 220 230 240 250 260
150 160 170 180 190 200
pF1KB8 GGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFCGRHFTKSYNLLIHERTHTDERPYT
.:: .::.:..::.::::::::::::.::::::::::::::::::::::::::::
NP_001 SGL------SKLTPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT
270 280 290 300 310 320
210 220 230 240 250 260
pF1KB8 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHSQVKELKTSKI
::::::::::::::::::::::::::::::::::::::::::::::::: :
NP_001 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTC
330 340 350 360 370 380
pF1KB8 KC
NP_001 GRTFNQRSNLKTHLLTHTDIKPYSCEQCGKVFRRNCDLRRHSLTHTPRQDF
390 400 410 420 430
266 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:26:46 2016 done: Sun Nov 6 21:26:47 2016
Total Scan time: 7.850 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]