Result of FASTA (omim) for
pFN21AB8349
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8349, 262 aa
1>>>pF1KB8349 262 - 262 aa - 262 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3856+/-0.000267; mu= 16.1726+/- 0.017
mean_var=88.4257+/-18.281, 0's: 0 Z-trim(121.8): 18 B-trim: 574 in 1/54
Lambda= 0.136391
statistics sampled from 38840 (38859) to 38840 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.456), width: 16
Scan time: 7.810
The best scores are: opt bits E(85289)
XP_016885250 (OMIM: 300394,302060) PREDICTED: tafa ( 287) 1494 303.0 4e-82
XP_006724900 (OMIM: 300394,302060) PREDICTED: tafa ( 305) 1494 303.0 4.2e-82
NP_000107 (OMIM: 300394,302060) tafazzin isoform 1 ( 292) 834 173.1 5.1e-43
XP_006724899 (OMIM: 300394,302060) PREDICTED: tafa ( 310) 834 173.1 5.3e-43
XP_011529493 (OMIM: 300394,302060) PREDICTED: tafa ( 200) 745 155.4 7.2e-38
NP_851828 (OMIM: 300394,302060) tafazzin isoform 2 ( 262) 734 153.4 3.9e-37
XP_006724904 (OMIM: 300394,302060) PREDICTED: tafa ( 223) 723 151.2 1.6e-36
XP_016885253 (OMIM: 300394,302060) PREDICTED: tafa ( 199) 716 149.7 3.7e-36
NP_851830 (OMIM: 300394,302060) tafazzin isoform 4 ( 248) 684 143.5 3.5e-34
XP_006724902 (OMIM: 300394,302060) PREDICTED: tafa ( 266) 684 143.5 3.6e-34
XP_016885254 (OMIM: 300394,302060) PREDICTED: tafa ( 179) 572 121.4 1.2e-27
XP_006724905 (OMIM: 300394,302060) PREDICTED: tafa ( 193) 539 114.9 1.1e-25
XP_016885252 (OMIM: 300394,302060) PREDICTED: tafa ( 221) 539 114.9 1.2e-25
XP_011529491 (OMIM: 300394,302060) PREDICTED: tafa ( 239) 539 115.0 1.3e-25
NP_851829 (OMIM: 300394,302060) tafazzin isoform 3 ( 278) 539 115.0 1.5e-25
NP_001290394 (OMIM: 300394,302060) tafazzin isofor ( 296) 539 115.1 1.5e-25
XP_016885251 (OMIM: 300394,302060) PREDICTED: tafa ( 280) 530 113.3 5e-25
>>XP_016885250 (OMIM: 300394,302060) PREDICTED: tafazzin (287 aa)
initn: 1748 init1: 1494 opt: 1494 Z-score: 1595.3 bits: 303.0 E(85289): 4e-82
Smith-Waterman score: 1704; 86.8% identity (87.8% similar) in 287 aa overlap (1-262:1-287)
10 20 30 40
pF1KB8 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQ------------AEAGPPG
::::::::::::::::::::::::::::::::::::. . : :.
XP_016 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA
10 20 30 40 50 60
50 60 70 80 90
pF1KB8 YP---------C---PA-GGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
: : : :::::::::::::::::::::::::::::::::::::::::
XP_016 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 VCRGDGVYQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLNPIILPLWHVGEPGDGDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCRGDGVYQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLNPIILPLWHVGEPGDGDRE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 MASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPYFPRFGQKITVLIGKPFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPYFPRFGQKITVLIGKPFSA
190 200 210 220 230 240
220 230 240 250 260
pF1KB8 LPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
250 260 270 280
>>XP_006724900 (OMIM: 300394,302060) PREDICTED: tafazzin (305 aa)
initn: 1892 init1: 1494 opt: 1494 Z-score: 1594.9 bits: 303.0 E(85289): 4.2e-82
Smith-Waterman score: 1719; 85.4% identity (85.4% similar) in 294 aa overlap (12-262:12-305)
10 20 30 40 50
pF1KB8 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQAEAGPPGYPCPAG------
:::::::::::::::::::::::::::::::::::::::::::
XP_006 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQAEAGPPGYPCPAGEYMNHL
10 20 30 40 50 60
60 70
pF1KB8 -------------------------------------GILKLRHIWNLKLMRWTPAAADI
:::::::::::::::::::::::
XP_006 TVHNREVLYELIEKRGPATPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADI
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB8 CFTKELHSHFFSLGKCVPVCRGDGVYQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CFTKELHSHFFSLGKCVPVCRGDGVYQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLN
130 140 150 160 170 180
140 150 160 170 180 190
pF1KB8 PIILPLWHVGEPGDGDREMASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PIILPLWHVGEPGDGDREMASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPY
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB8 FPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNH
250 260 270 280 290 300
260
pF1KB8 LQPGR
:::::
XP_006 LQPGR
>>NP_000107 (OMIM: 300394,302060) tafazzin isoform 1 [Ho (292 aa)
initn: 1091 init1: 516 opt: 834 Z-score: 893.3 bits: 173.1 E(85289): 5.1e-43
Smith-Waterman score: 1206; 63.4% identity (64.4% similar) in 331 aa overlap (1-262:1-292)
10 20 30 40
pF1KB8 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQ------------AEAGPPG
::::::::::::::::::::::::::::::::::::. . : :.
NP_000 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA
10 20 30 40 50 60
50 60 70 80 90
pF1KB8 YP---------C---PA-GGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
: : : :::::::::::::::::::::::::::::::::::::::::
NP_000 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
70 80 90 100 110 120
100 110 120
pF1KB8 VCRG------------------------------DGVYQKGMDFILEKLNHGDWVHIFPE
:::: ::::::::::::::::::::::::::
NP_000 VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE
130 140 150 160 170 180
130 140 150 160 170
pF1KB8 G--------------IGRLIAECHLNPIILPLWHVGEPGDGDREMASGVGGLGLPLVPGC
: :::::::::::::::::::::
NP_000 GKVNMSSEFLRFKWGIGRLIAECHLNPIILPLWHVG------------------------
190 200 210
180 190 200 210 220 230
pF1KB8 PAPPHVWPSVHCAAGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVE
:::::::::::::::::::::::::::::::::::::::::::::
NP_000 ---------------MNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVE
220 230 240 250 260
240 250 260
pF1KB8 MRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
:::::::::::::::::::::::::::::::
NP_000 MRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
270 280 290
>>XP_006724899 (OMIM: 300394,302060) PREDICTED: tafazzin (310 aa)
initn: 1235 init1: 516 opt: 834 Z-score: 893.0 bits: 173.1 E(85289): 5.3e-43
Smith-Waterman score: 1186; 62.2% identity (62.2% similar) in 333 aa overlap (17-262:17-310)
10 20 30 40 50
pF1KB8 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQAEAGPPGYPCPAG------
::::::::::::::::::::::::::::::::::::::
XP_006 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQAEAGPPGYPCPAGEYMNHL
10 20 30 40 50 60
60 70
pF1KB8 -------------------------------------GILKLRHIWNLKLMRWTPAAADI
:::::::::::::::::::::::
XP_006 TVHNREVLYELIEKRGPATPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADI
70 80 90 100 110 120
80 90 100
pF1KB8 CFTKELHSHFFSLGKCVPVCRG------------------------------DGVYQKGM
:::::::::::::::::::::: ::::::::
XP_006 CFTKELHSHFFSLGKCVPVCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGM
130 140 150 160 170 180
110 120 130 140 150
pF1KB8 DFILEKLNHGDWVHIFPEG--------------IGRLIAECHLNPIILPLWHVGEPGDGD
::::::::::::::::::: :::::::::::::::::::::
XP_006 DFILEKLNHGDWVHIFPEGKVNMSSEFLRFKWGIGRLIAECHLNPIILPLWHVG------
190 200 210 220 230
160 170 180 190 200 210
pF1KB8 REMASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPYFPRFGQKITVLIGKPF
:::::::::::::::::::::::::::
XP_006 ---------------------------------MNDVLPNSPPYFPRFGQKITVLIGKPF
240 250 260
220 230 240 250 260
pF1KB8 SALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
270 280 290 300 310
>>XP_011529493 (OMIM: 300394,302060) PREDICTED: tafazzin (200 aa)
initn: 748 init1: 516 opt: 745 Z-score: 800.8 bits: 155.4 E(85289): 7.2e-38
Smith-Waterman score: 907; 65.3% identity (65.3% similar) in 239 aa overlap (68-262:1-200)
40 50 60 70 80 90
pF1KB8 EWAQAEAGPPGYPCPAGGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVPVC
::::::::::::::::::::::::::::::
XP_011 MRWTPAAADICFTKELHSHFFSLGKCVPVC
10 20 30
100 110 120
pF1KB8 RG------------------------------DGVYQKGMDFILEKLNHGDWVHIFPEG-
:: :::::::::::::::::::::::::::
XP_011 RGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPEGK
40 50 60 70 80 90
130 140 150 160 170
pF1KB8 -------------IGRLIAECHLNPIILPLWHVGEPGDGDREMASGVGGLGLPLVPGCPA
:::::::::::::::::::::
XP_011 VNMSSEFLRFKWGIGRLIAECHLNPIILPLWHVG--------------------------
100 110 120
180 190 200 210 220 230
pF1KB8 PPHVWPSVHCAAGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMR
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 -------------MNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMR
130 140 150 160 170
240 250 260
pF1KB8 KALTDFIQEEFQHLKTQAEQLHNHLQPGR
:::::::::::::::::::::::::::::
XP_011 KALTDFIQEEFQHLKTQAEQLHNHLQPGR
180 190 200
>>NP_851828 (OMIM: 300394,302060) tafazzin isoform 2 [Ho (262 aa)
initn: 542 init1: 542 opt: 734 Z-score: 787.6 bits: 153.4 E(85289): 3.9e-37
Smith-Waterman score: 1276; 69.8% identity (70.8% similar) in 301 aa overlap (1-262:1-262)
10 20 30 40
pF1KB8 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQ------------AEAGPPG
::::::::::::::::::::::::::::::::::::. . : :.
NP_851 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA
10 20 30 40 50 60
50 60 70 80 90
pF1KB8 YP---------C---PA-GGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
: : : :::::::::::::::::::::::::::::::::::::::::
NP_851 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
70 80 90 100 110 120
100 110 120 130 140
pF1KB8 VCRGDGVYQKGMDFILEKLNHGDWVHIFPEG--------------IGRLIAECHLNPIIL
::::::::::::::::::::::::::::::: :::::::::::::::
NP_851 VCRGDGVYQKGMDFILEKLNHGDWVHIFPEGKVNMSSEFLRFKWGIGRLIAECHLNPIIL
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 PLWHVGEPGDGDREMASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPYFPRF
:::::: :::::::::::::::
NP_851 PLWHVG---------------------------------------MNDVLPNSPPYFPRF
190 200
210 220 230 240 250 260
pF1KB8 GQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_851 GQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPG
210 220 230 240 250 260
pF1KB8 R
:
NP_851 R
>>XP_006724904 (OMIM: 300394,302060) PREDICTED: tafazzin (223 aa)
initn: 749 init1: 516 opt: 723 Z-score: 776.8 bits: 151.2 E(85289): 1.6e-36
Smith-Waterman score: 885; 59.3% identity (60.4% similar) in 270 aa overlap (37-262:4-223)
10 20 30 40 50 60
pF1KB8 WPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQAEAGPPGYPCPAGGILKLRHIWNLK
:.:: . :: .
XP_006 MGPSKWAGPAPPASAQICPPPA-----------
10 20
70 80 90
pF1KB8 LMRWTPAAADICFTKELHSHFFSLGKCVPVCRG---------------------------
: : :::::::::::::::::::::::::::::
XP_006 LPRRTPAAADICFTKELHSHFFSLGKCVPVCRGAEFFQAENEGKGVLDTGRHMPGAGKRR
30 40 50 60 70 80
100 110 120 130 140
pF1KB8 ---DGVYQKGMDFILEKLNHGDWVHIFPEG--------------IGRLIAECHLNPIILP
::::::::::::::::::::::::::: ::::::::::::::::
XP_006 EKGDGVYQKGMDFILEKLNHGDWVHIFPEGKVNMSSEFLRFKWGIGRLIAECHLNPIILP
90 100 110 120 130 140
150 160 170 180 190 200
pF1KB8 LWHVGEPGDGDREMASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPYFPRFG
::::: ::::::::::::::::
XP_006 LWHVG---------------------------------------MNDVLPNSPPYFPRFG
150 160
210 220 230 240 250 260
pF1KB8 QKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
170 180 190 200 210 220
>>XP_016885253 (OMIM: 300394,302060) PREDICTED: tafazzin (199 aa)
initn: 719 init1: 516 opt: 716 Z-score: 770.0 bits: 149.7 E(85289): 3.7e-36
Smith-Waterman score: 878; 64.8% identity (64.8% similar) in 236 aa overlap (71-262:3-199)
50 60 70 80 90
pF1KB8 QAEAGPPGYPCPAGGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVPVCRG-
:::::::::::::::::::::::::::::
XP_016 MGTPAAADICFTKELHSHFFSLGKCVPVCRGA
10 20 30
100 110 120
pF1KB8 -----------------------------DGVYQKGMDFILEKLNHGDWVHIFPEG----
:::::::::::::::::::::::::::
XP_016 EFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPEGKVNM
40 50 60 70 80 90
130 140 150 160 170
pF1KB8 ----------IGRLIAECHLNPIILPLWHVGEPGDGDREMASGVGGLGLPLVPGCPAPPH
:::::::::::::::::::::
XP_016 SSEFLRFKWGIGRLIAECHLNPIILPLWHVG-----------------------------
100 110 120
180 190 200 210 220 230
pF1KB8 VWPSVHCAAGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKAL
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ----------MNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKAL
130 140 150 160 170
240 250 260
pF1KB8 TDFIQEEFQHLKTQAEQLHNHLQPGR
::::::::::::::::::::::::::
XP_016 TDFIQEEFQHLKTQAEQLHNHLQPGR
180 190
>>NP_851830 (OMIM: 300394,302060) tafazzin isoform 4 [Ho (248 aa)
initn: 938 init1: 684 opt: 684 Z-score: 734.7 bits: 143.5 E(85289): 3.5e-34
Smith-Waterman score: 1314; 73.2% identity (74.2% similar) in 287 aa overlap (1-262:1-248)
10 20 30 40
pF1KB8 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQ------------AEAGPPG
::::::::::::::::::::::::::::::::::::. . : :.
NP_851 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA
10 20 30 40 50 60
50 60 70 80 90
pF1KB8 YP---------C---PA-GGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
: : : :::::::::::::::::::::::::::::::::::::::::
NP_851 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 VCRGDGVYQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLNPIILPLWHVGEPGDGDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_851 VCRGDGVYQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLNPIILPLWHVG--------
130 140 150 160 170
160 170 180 190 200 210
pF1KB8 MASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPYFPRFGQKITVLIGKPFSA
:::::::::::::::::::::::::::::
NP_851 -------------------------------MNDVLPNSPPYFPRFGQKITVLIGKPFSA
180 190 200
220 230 240 250 260
pF1KB8 LPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
:::::::::::::::::::::::::::::::::::::::::::::::
NP_851 LPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
210 220 230 240
>>XP_006724902 (OMIM: 300394,302060) PREDICTED: tafazzin (266 aa)
initn: 1082 init1: 684 opt: 684 Z-score: 734.3 bits: 143.5 E(85289): 3.6e-34
Smith-Waterman score: 1329; 72.1% identity (72.1% similar) in 294 aa overlap (12-262:12-266)
10 20 30 40 50
pF1KB8 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQAEAGPPGYPCPAG------
:::::::::::::::::::::::::::::::::::::::::::
XP_006 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQAEAGPPGYPCPAGEYMNHL
10 20 30 40 50 60
60 70
pF1KB8 -------------------------------------GILKLRHIWNLKLMRWTPAAADI
:::::::::::::::::::::::
XP_006 TVHNREVLYELIEKRGPATPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADI
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB8 CFTKELHSHFFSLGKCVPVCRGDGVYQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CFTKELHSHFFSLGKCVPVCRGDGVYQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLN
130 140 150 160 170 180
140 150 160 170 180 190
pF1KB8 PIILPLWHVGEPGDGDREMASGVGGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPY
:::::::::: :::::::::::
XP_006 PIILPLWHVG---------------------------------------MNDVLPNSPPY
190 200
200 210 220 230 240 250
pF1KB8 FPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNH
210 220 230 240 250 260
260
pF1KB8 LQPGR
:::::
XP_006 LQPGR
262 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 16:19:00 2016 done: Mon Nov 7 16:19:01 2016
Total Scan time: 7.810 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]