Result of FASTA (omim) for
pFN21AB8114
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8114, 324 aa
1>>>pF1KB8114 324 - 324 aa - 324 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4901+/-0.000302; mu= 11.8092+/- 0.019
mean_var=110.3991+/-21.931, 0's: 0 Z-trim(119.9): 99 B-trim: 0 in 0/57
Lambda= 0.122065
statistics sampled from 34351 (34450) to 34351 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.404), width: 16
Scan time: 8.800
The best scores are: opt bits E(85289)
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324) 2163 391.0 1.7e-108
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277) 1816 329.9 3.8e-90
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241) 573 111.0 2.7e-24
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257) 573 111.0 2.8e-24
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326) 573 111.0 3.4e-24
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 573 111.0 3.4e-24
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 573 111.0 3.4e-24
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 573 111.0 3.4e-24
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211) 498 97.7 2.3e-20
XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolo ( 232) 494 97.0 4e-20
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B ( 232) 494 97.0 4e-20
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B ( 309) 476 93.9 4.5e-19
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B ( 340) 395 79.7 9.5e-15
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337) 376 76.4 9.6e-14
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B ( 337) 376 76.4 9.6e-14
NP_036398 (OMIM: 611328) dnaJ homolog subfamily B ( 348) 362 73.9 5.4e-13
XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 362 73.9 5.4e-13
XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 362 73.9 5.4e-13
NP_001128477 (OMIM: 611328) dnaJ homolog subfamily ( 420) 362 74.0 6.3e-13
XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolo ( 420) 362 74.0 6.3e-13
NP_001128476 (OMIM: 611328) dnaJ homolog subfamily ( 462) 362 74.0 6.8e-13
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316) 339 69.8 8.4e-12
XP_011543315 (OMIM: 610263,617091) PREDICTED: dnaJ ( 246) 305 63.8 4.3e-10
XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ ( 350) 305 63.9 5.7e-10
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily ( 77) 291 60.9 9.6e-10
NP_036460 (OMIM: 602634) dnaJ homolog subfamily B ( 223) 297 62.3 1.1e-09
NP_057390 (OMIM: 611341) dnaJ homolog subfamily B ( 358) 300 63.0 1.1e-09
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453) 301 63.2 1.1e-09
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A ( 480) 301 63.3 1.2e-09
XP_011527351 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198) 271 57.7 2.3e-08
NP_079495 (OMIM: 611203) dnaJ homolog subfamily C ( 198) 271 57.7 2.3e-08
XP_011527350 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198) 271 57.7 2.3e-08
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A ( 412) 273 58.3 3.2e-08
XP_011543316 (OMIM: 610263,617091) PREDICTED: dnaJ ( 218) 262 56.2 7.5e-08
XP_016873168 (OMIM: 610263,617091) PREDICTED: dnaJ ( 218) 262 56.2 7.5e-08
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409) 264 56.7 9.7e-08
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B ( 409) 264 56.7 9.7e-08
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409) 264 56.7 9.7e-08
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411) 264 56.7 9.7e-08
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A ( 397) 257 55.5 2.2e-07
XP_011515922 (OMIM: 613945) PREDICTED: dnaJ homolo ( 180) 242 52.6 7.4e-07
XP_011515920 (OMIM: 613945) PREDICTED: dnaJ homolo ( 199) 242 52.6 8e-07
NP_149096 (OMIM: 613945) dnaJ homolog subfamily C ( 199) 242 52.6 8e-07
XP_016876164 (OMIM: 601184,616192) PREDICTED: dnaJ ( 383) 243 53.0 1.2e-06
XP_016876163 (OMIM: 601184,616192) PREDICTED: dnaJ ( 421) 243 53.0 1.3e-06
XP_011519407 (OMIM: 601184,616192) PREDICTED: dnaJ ( 450) 243 53.0 1.4e-06
NP_006251 (OMIM: 601184,616192) dnaJ homolog subfa ( 504) 243 53.1 1.5e-06
XP_011519406 (OMIM: 601184,616192) PREDICTED: dnaJ ( 533) 243 53.1 1.6e-06
NP_001012339 (OMIM: 617048,617052) dnaJ homolog su ( 531) 242 52.9 1.7e-06
XP_005248307 (OMIM: 617048,617052) PREDICTED: dnaJ ( 553) 242 52.9 1.8e-06
>>NP_006727 (OMIM: 604139,614881,617017) dnaJ homolog su (324 aa)
initn: 2163 init1: 2163 opt: 2163 Z-score: 2068.7 bits: 391.0 E(85289): 1.7e-108
Smith-Waterman score: 2163; 100.0% identity (100.0% similar) in 324 aa overlap (1-324:1-324)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KREIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 GPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TRRIMENGQERVEVEEDGQLKSVTINGVPDDLALGLELSRREQQPSVTSRSGGTQVQQTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TRRIMENGQERVEVEEDGQLKSVTINGVPDDLALGLELSRREQQPSVTSRSGGTQVQQTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 ASCPLDSDLSEDEDLQLAMAYSLSEMEAAGKKPAGGREAQHRRQGRPKAQHQDPGLGGTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ASCPLDSDLSEDEDLQLAMAYSLSEMEAAGKKPAGGREAQHRRQGRPKAQHQDPGLGGTQ
250 260 270 280 290 300
310 320
pF1KB8 EGARGEATKRSPSPEEKASRCLIL
::::::::::::::::::::::::
NP_006 EGARGEATKRSPSPEEKASRCLIL
310 320
>>NP_001034639 (OMIM: 604139,614881,617017) dnaJ homolog (277 aa)
initn: 1816 init1: 1816 opt: 1816 Z-score: 1739.4 bits: 329.9 E(85289): 3.8e-90
Smith-Waterman score: 1816; 100.0% identity (100.0% similar) in 274 aa overlap (1-274:1-274)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KREIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 GPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TRRIMENGQERVEVEEDGQLKSVTINGVPDDLALGLELSRREQQPSVTSRSGGTQVQQTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRRIMENGQERVEVEEDGQLKSVTINGVPDDLALGLELSRREQQPSVTSRSGGTQVQQTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 ASCPLDSDLSEDEDLQLAMAYSLSEMEAAGKKPAGGREAQHRRQGRPKAQHQDPGLGGTQ
::::::::::::::::::::::::::::::::::
NP_001 ASCPLDSDLSEDEDLQLAMAYSLSEMEAAGKKPADVF
250 260 270
310 320
pF1KB8 EGARGEATKRSPSPEEKASRCLIL
>>NP_005485 (OMIM: 603511,611332) dnaJ homolog subfamily (241 aa)
initn: 666 init1: 392 opt: 573 Z-score: 557.3 bits: 111.0 E(85289): 2.7e-24
Smith-Waterman score: 760; 55.9% identity (73.9% similar) in 238 aa overlap (1-207:1-231)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
:..:::.: : : :: .:::::::. ::.:::::::.::: ::.:::.:::::::::: .
NP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGP-GFTFTFRSPEEVFREFFGSGDPFA-ELFD
::.:::.::.:::.: : : :. .. : : ::::.:..:::::::. :::. ..:.
NP_005 KRDIYDKYGKEGLNGGGGGGSHFDS----PFEFGFTFRNPDDVFREFFGGRDPFSFDFFE
70 80 90 100 110
120 130 140
pF1KB8 DLGPFSEL--QNRG-----SRHSGPFFTFSSSFP-------------------GH---SD
: :: .. . :: :: .: ::. :.:: :: ..
NP_005 D--PFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTS
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB8 FSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVTINGVP
:::.::. : : : :.:.:::: .:.::.:::.::.:::::::::::::::::.::::
NP_005 FSSTSFGGS-GMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKE
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 DDLALGLELSRREQQPSVTSRSGGTQVQQTPASCPLDSDLSEDEDLQLAMAYSLSEMEAA
NP_005 QLLRLDNK
240
>>XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ hom (257 aa)
initn: 738 init1: 392 opt: 573 Z-score: 556.9 bits: 111.0 E(85289): 2.8e-24
Smith-Waterman score: 765; 51.7% identity (72.4% similar) in 261 aa overlap (1-230:1-254)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
:..:::.: : : :: .:::::::. ::.:::::::.::: ::.:::.:::::::::: .
XP_006 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGP-GFTFTFRSPEEVFREFFGSGDPFA-ELFD
::.:::.::.:::.: : : :. .. : : ::::.:..:::::::. :::. ..:.
XP_006 KRDIYDKYGKEGLNGGGGGGSHFDS----PFEFGFTFRNPDDVFREFFGGRDPFSFDFFE
70 80 90 100 110
120 130 140
pF1KB8 DLGPFSEL--QNRG-----SRHSGPFFTFSSSFP-------------------GH---SD
: :: .. . :: :: .: ::. :.:: :: ..
XP_006 D--PFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTS
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB8 FSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVTINGVP
:::.::. : : : :.:.:::: .:.::.:::.::.:::::::::::::::::.::::.
XP_006 FSSTSFGGS-GMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGLK
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 DDLALGLELSRREQQPSVTSRSGGTQVQQTPASCPLDSDLSEDEDLQLAMAYSLSEMEAA
. . .:.:.. . ...
XP_006 EGGKRKKQKQREESKKKKSTKGNH
240 250
>>NP_490647 (OMIM: 603511,611332) dnaJ homolog subfamily (326 aa)
initn: 782 init1: 392 opt: 573 Z-score: 555.4 bits: 111.0 E(85289): 3.4e-24
Smith-Waterman score: 829; 48.8% identity (67.1% similar) in 328 aa overlap (1-290:1-320)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
:..:::.: : : :: .:::::::. ::.:::::::.::: ::.:::.:::::::::: .
NP_490 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGP-GFTFTFRSPEEVFREFFGSGDPFA-ELFD
::.:::.::.:::.: : : :. .. : : ::::.:..:::::::. :::. ..:.
NP_490 KRDIYDKYGKEGLNGGGGGGSHFDS----PFEFGFTFRNPDDVFREFFGGRDPFSFDFFE
70 80 90 100 110
120 130 140
pF1KB8 DLGPFSEL--QNRG-----SRHSGPFFTFSSSFP-------------------GH---SD
: :: .. . :: :: .: ::. :.:: :: ..
NP_490 D--PFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTS
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB8 FSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVTINGVP
:::.::. : : : :.:.:::: .:.::.:::.::.:::::::::::::::::.:::::
NP_490 FSSTSFGGS-GMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVA
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 DDLALGLELSRREQQPSVTSRSGGTQVQQTPASCPLDSD----LSEDE---DLQLAMAYS
:: ::. : :: :. .. .. .: . . : : :::.: : : .
NP_490 DDDALAEERMRRGQN-ALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPW
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB8 LSEMEAAGKKPAGGREAQHRRQGRPKAQHQDPGLGGTQEGARGEATKRSPSPEEKASRCL
::: : .: :. :..:. : .
NP_490 DPLASAAGLKEGGKRKKQKQREESKKKKSTKGNH
300 310 320
>>XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ hom (334 aa)
initn: 778 init1: 392 opt: 573 Z-score: 555.3 bits: 111.0 E(85289): 3.4e-24
Smith-Waterman score: 813; 47.2% identity (66.4% similar) in 339 aa overlap (1-306:1-321)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
:..:::.: : : :: .:::::::. ::.:::::::.::: ::.:::.:::::::::: .
XP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGP-GFTFTFRSPEEVFREFFGSGDPFA-ELFD
::.:::.::.:::.: : : :. .. : : ::::.:..:::::::. :::. ..:.
XP_005 KRDIYDKYGKEGLNGGGGGGSHFDS----PFEFGFTFRNPDDVFREFFGGRDPFSFDFFE
70 80 90 100 110
120 130 140
pF1KB8 DLGPFSEL--QNRG-----SRHSGPFFTFSSSFP-------------------GH---SD
: :: .. . :: :: .: ::. :.:: :: ..
XP_005 D--PFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTS
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB8 FSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVTINGVP
:::.::. : : : :.:.:::: .:.::.:::.::.:::::::::::::::::.:::::
XP_005 FSSTSFGGS-GMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVA
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 DDLALGLELSRREQQPSVTSRSGGTQVQQTPASCPLDSDLSEDEDLQLAMAYSLSEMEAA
:: ::. : :: :. .. .. .: . : . : ..: :. : . ::: :.
XP_005 DDDALAEERMRRGQN-ALPAQPAGLR----PPKPPRPASL-----LRHA-PHCLSEEEGE
240 250 260 270 280
270 280 290 300 310 320
pF1KB8 GKKP--AGGREAQHRRQGRPKAQHQDPGLGGTQEGARGEATKRSPSPEEKASRCLIL
.: : . : . . . . :. ::::.
XP_005 QDRPRAPGPWDPLASAAGVQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
290 300 310 320 330
>>XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ hom (334 aa)
initn: 778 init1: 392 opt: 573 Z-score: 555.3 bits: 111.0 E(85289): 3.4e-24
Smith-Waterman score: 813; 47.2% identity (66.4% similar) in 339 aa overlap (1-306:1-321)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
:..:::.: : : :: .:::::::. ::.:::::::.::: ::.:::.:::::::::: .
XP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGP-GFTFTFRSPEEVFREFFGSGDPFA-ELFD
::.:::.::.:::.: : : :. .. : : ::::.:..:::::::. :::. ..:.
XP_005 KRDIYDKYGKEGLNGGGGGGSHFDS----PFEFGFTFRNPDDVFREFFGGRDPFSFDFFE
70 80 90 100 110
120 130 140
pF1KB8 DLGPFSEL--QNRG-----SRHSGPFFTFSSSFP-------------------GH---SD
: :: .. . :: :: .: ::. :.:: :: ..
XP_005 D--PFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTS
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB8 FSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVTINGVP
:::.::. : : : :.:.:::: .:.::.:::.::.:::::::::::::::::.:::::
XP_005 FSSTSFGGS-GMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVA
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 DDLALGLELSRREQQPSVTSRSGGTQVQQTPASCPLDSDLSEDEDLQLAMAYSLSEMEAA
:: ::. : :: :. .. .. .: . : . : ..: :. : . ::: :.
XP_005 DDDALAEERMRRGQN-ALPAQPAGLR----PPKPPRPASL-----LRHA-PHCLSEEEGE
240 250 260 270 280
270 280 290 300 310 320
pF1KB8 GKKP--AGGREAQHRRQGRPKAQHQDPGLGGTQEGARGEATKRSPSPEEKASRCLIL
.: : . : . . . . :. ::::.
XP_005 QDRPRAPGPWDPLASAAGVQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
290 300 310 320 330
>>XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ hom (334 aa)
initn: 778 init1: 392 opt: 573 Z-score: 555.3 bits: 111.0 E(85289): 3.4e-24
Smith-Waterman score: 813; 47.2% identity (66.4% similar) in 339 aa overlap (1-306:1-321)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
:..:::.: : : :: .:::::::. ::.:::::::.::: ::.:::.:::::::::: .
XP_011 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGP-GFTFTFRSPEEVFREFFGSGDPFA-ELFD
::.:::.::.:::.: : : :. .. : : ::::.:..:::::::. :::. ..:.
XP_011 KRDIYDKYGKEGLNGGGGGGSHFDS----PFEFGFTFRNPDDVFREFFGGRDPFSFDFFE
70 80 90 100 110
120 130 140
pF1KB8 DLGPFSEL--QNRG-----SRHSGPFFTFSSSFP-------------------GH---SD
: :: .. . :: :: .: ::. :.:: :: ..
XP_011 D--PFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTS
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB8 FSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVTINGVP
:::.::. : : : :.:.:::: .:.::.:::.::.:::::::::::::::::.:::::
XP_011 FSSTSFGGS-GMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVA
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 DDLALGLELSRREQQPSVTSRSGGTQVQQTPASCPLDSDLSEDEDLQLAMAYSLSEMEAA
:: ::. : :: :. .. .. .: . : . : ..: :. : . ::: :.
XP_011 DDDALAEERMRRGQN-ALPAQPAGLR----PPKPPRPASL-----LRHA-PHCLSEEEGE
240 250 260 270 280
270 280 290 300 310 320
pF1KB8 GKKP--AGGREAQHRRQGRPKAQHQDPGLGGTQEGARGEATKRSPSPEEKASRCLIL
.: : . : . . . . :. ::::.
XP_011 QDRPRAPGPWDPLASAAGVQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
290 300 310 320 330
>>XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ hom (211 aa)
initn: 524 init1: 385 opt: 498 Z-score: 486.7 bits: 97.7 E(85289): 2.3e-20
Smith-Waterman score: 498; 63.1% identity (82.0% similar) in 122 aa overlap (1-121:1-116)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
:..:::.: : : :: .:::::::. ::.:::::::.::: ::.:::.:::::::::: .
XP_016 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGP-GFTFTFRSPEEVFREFFGSGDPFAELFDD
::.:::.::.:::.: : : :. .. : : ::::.:..:::::::. :::. ::
XP_016 KRDIYDKYGKEGLNGGGGGGSHFDS----PFEFGFTFRNPDDVFREFFGGRDPFS--FDF
70 80 90 100 110
120 130 140 150 160 170
pF1KB8 LGPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRI
.:
XP_016 FGVADDDALAEERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAP
120 130 140 150 160 170
>>XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolog su (232 aa)
initn: 725 init1: 338 opt: 494 Z-score: 482.3 bits: 97.0 E(85289): 4e-20
Smith-Waterman score: 678; 53.5% identity (72.4% similar) in 228 aa overlap (1-207:1-222)
10 20 30 40 50 60
pF1KB8 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH
::.:::.: : ::: .:::::::. ::.::::::::::: :::::: :.::::::::..
XP_006 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KREIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDL
:: .::: : .. . : : : . :.:: :.::..::::::. :::. : :
XP_006 KRSLYDRAGCDSWRAGG-GASTPYHSPFDTGYTF--RNPEDIFREFFGGLDPFSFEFWD-
70 80 90 100 110
130 140 150
pF1KB8 GPFSELQNRGSRHSG------------PFF--TFSS------SFPGHSDFSSSSFS-FSP
.::. ..::.: : : : .::: : .:. :::.::. :
XP_006 SPFN--SDRGGRGHGLRGAFSAGFGEFPAFMEAFSSFNMLGCSGGSHTTFSSTSFGGSSS
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB8 GAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVTINGVPDDLALGLELS
:...:.:: .:: ...:...::.::.:::::::::::::::::::.::
XP_006 GSSGFKSVMSSTEMINGHKVTTKRIVENGQERVEVEEDGQLKSVTVNGKEQLKWMDSK
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 RREQQPSVTSRSGGTQVQQTPASCPLDSDLSEDEDLQLAMAYSLSEMEAAGKKPAGGREA
324 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:01:02 2016 done: Sun Nov 6 18:01:04 2016
Total Scan time: 8.800 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]