Result of FASTA (omim) for
pFN21AB7892
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7892, 653 aa
1>>>pF1KB7892 653 - 653 aa - 653 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.2494+/-0.000491; mu= -14.5584+/- 0.031
mean_var=648.0550+/-135.726, 0's: 0 Z-trim(123.7): 142 B-trim: 1490 in 1/60
Lambda= 0.050381
statistics sampled from 43909 (44087) to 43909 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.517), width: 16
Scan time: 11.220
The best scores are: opt bits E(85289)
XP_016858232 (OMIM: 603444) PREDICTED: far upstrea ( 653) 4640 352.6 2.7e-96
XP_016858230 (OMIM: 603444) PREDICTED: far upstrea ( 666) 4577 348.0 6.5e-95
XP_011540695 (OMIM: 603444) PREDICTED: far upstrea ( 667) 4565 347.1 1.2e-94
XP_016858233 (OMIM: 603444) PREDICTED: far upstrea ( 643) 4558 346.6 1.7e-94
NP_003893 (OMIM: 603444) far upstream element-bind ( 644) 4546 345.7 3e-94
XP_016858229 (OMIM: 603444) PREDICTED: far upstrea ( 675) 4166 318.1 6.5e-86
XP_011540694 (OMIM: 603444) PREDICTED: far upstrea ( 687) 4115 314.4 8.5e-85
XP_011540693 (OMIM: 603444) PREDICTED: far upstrea ( 688) 4103 313.6 1.6e-84
XP_016858228 (OMIM: 603444) PREDICTED: far upstrea ( 688) 4103 313.6 1.6e-84
XP_016858231 (OMIM: 603444) PREDICTED: far upstrea ( 664) 4096 313.0 2.2e-84
NP_001290362 (OMIM: 603444) far upstream element-b ( 665) 4084 312.2 4e-84
XP_016882897 (OMIM: 603445) PREDICTED: far upstrea ( 678) 2393 189.3 4e-47
XP_016882898 (OMIM: 603445) PREDICTED: far upstrea ( 642) 2355 186.5 2.6e-46
XP_011526697 (OMIM: 603445) PREDICTED: far upstrea ( 703) 2333 184.9 8.5e-46
NP_003676 (OMIM: 603445) far upstream element-bind ( 711) 2317 183.8 1.9e-45
XP_005259725 (OMIM: 603445) PREDICTED: far upstrea ( 747) 2317 183.8 2e-45
XP_016882899 (OMIM: 603445) PREDICTED: far upstrea ( 603) 1965 158.1 8.6e-38
NP_003925 (OMIM: 603536) far upstream element-bind ( 572) 1929 155.4 5.1e-37
XP_005272289 (OMIM: 603536) PREDICTED: far upstrea ( 548) 1909 154.0 1.4e-36
XP_011517475 (OMIM: 603536) PREDICTED: far upstrea ( 499) 1892 152.7 3e-36
XP_011517474 (OMIM: 603536) PREDICTED: far upstrea ( 514) 1877 151.6 6.5e-36
XP_006717376 (OMIM: 603536) PREDICTED: far upstrea ( 485) 1835 148.5 5.2e-35
XP_011517476 (OMIM: 603536) PREDICTED: far upstrea ( 485) 1835 148.5 5.2e-35
XP_016870758 (OMIM: 603536) PREDICTED: far upstrea ( 461) 1815 147.1 1.4e-34
XP_016870759 (OMIM: 603536) PREDICTED: far upstrea ( 377) 1302 109.7 2e-23
XP_016870761 (OMIM: 603536) PREDICTED: far upstrea ( 377) 1302 109.7 2e-23
XP_016870760 (OMIM: 603536) PREDICTED: far upstrea ( 377) 1302 109.7 2e-23
XP_016870762 (OMIM: 603536) PREDICTED: far upstrea ( 353) 1282 108.2 5.3e-23
>>XP_016858232 (OMIM: 603444) PREDICTED: far upstream el (653 aa)
initn: 4640 init1: 4640 opt: 4640 Z-score: 1849.8 bits: 352.6 E(85289): 2.7e-96
Smith-Waterman score: 4640; 100.0% identity (100.0% similar) in 653 aa overlap (1-653:1-653)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 QNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 GPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYY
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 AHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT
550 560 570 580 590 600
610 620 630 640 650
pF1KB7 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCRFDPASIELAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCRFDPASIELAL
610 620 630 640 650
>>XP_016858230 (OMIM: 603444) PREDICTED: far upstream el (666 aa)
initn: 4571 init1: 4571 opt: 4577 Z-score: 1825.0 bits: 348.0 E(85289): 6.5e-95
Smith-Waterman score: 4577; 99.1% identity (99.5% similar) in 649 aa overlap (1-649:1-649)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 QNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 GPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYY
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 AHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT
550 560 570 580 590 600
610 620 630 640 650
pF1KB7 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCRFDPASIELAL
:::::::::::::::::::::::::::::::::::::::::: :...
XP_016 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKSTSAED
610 620 630 640 650 660
XP_016 AASTKS
>>XP_011540695 (OMIM: 603444) PREDICTED: far upstream el (667 aa)
initn: 3971 init1: 3971 opt: 4565 Z-score: 1820.2 bits: 347.1 E(85289): 1.2e-94
Smith-Waterman score: 4565; 98.9% identity (99.4% similar) in 650 aa overlap (1-649:1-650)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQ-RSVMTEEYKVPDGMVGFIIGRGG
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
XP_011 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 EQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 DGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGD
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 PYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKK
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 IQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB7 RGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB7 DPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB7 MGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAY
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB7 YAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAP
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB7 TGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCRFDPASIELAL
::::::::::::::::::::::::::::::::::::::::::: :...
XP_011 TGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKSTSAE
610 620 630 640 650 660
XP_011 DAASTKS
>>XP_016858233 (OMIM: 603444) PREDICTED: far upstream el (643 aa)
initn: 4558 init1: 4558 opt: 4558 Z-score: 1817.7 bits: 346.6 E(85289): 1.7e-94
Smith-Waterman score: 4558; 100.0% identity (100.0% similar) in 641 aa overlap (1-641:1-641)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 QNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 GPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYY
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 AHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT
550 560 570 580 590 600
610 620 630 640 650
pF1KB7 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCRFDPASIELAL
:::::::::::::::::::::::::::::::::::::::::
XP_016 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ
610 620 630 640
>>NP_003893 (OMIM: 603444) far upstream element-binding (644 aa)
initn: 3958 init1: 3958 opt: 4546 Z-score: 1813.0 bits: 345.7 E(85289): 3e-94
Smith-Waterman score: 4546; 99.8% identity (99.8% similar) in 642 aa overlap (1-641:1-642)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQ-RSVMTEEYKVPDGMVGFIIGRGG
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
NP_003 GGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 EQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 DGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGD
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 PYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKK
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 IQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB7 RGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB7 DPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB7 MGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAY
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB7 YAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAP
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB7 TGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCRFDPASIELAL
::::::::::::::::::::::::::::::::::::::::::
NP_003 TGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ
610 620 630 640
>>XP_016858229 (OMIM: 603444) PREDICTED: far upstream el (675 aa)
initn: 4467 init1: 3992 opt: 4166 Z-score: 1663.4 bits: 318.1 E(85289): 6.5e-86
Smith-Waterman score: 4576; 96.7% identity (96.7% similar) in 675 aa overlap (1-653:1-675)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90
pF1KB7 GGQKRPLEDGD---------------------QPDAKKVAPQNDSFGTQLPPMHQQQ-RS
::::::::::: ::::::::::::::::::::::::: ::
XP_016 GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRS
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEII
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB7 QAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQ
550 560 570 580 590 600
580 590 600 610 620 630
pF1KB7 VDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP
610 620 630 640 650 660
640 650
pF1KB7 APQCRFDPASIELAL
:::::::::::::::
XP_016 APQCRFDPASIELAL
670
>>XP_011540694 (OMIM: 603444) PREDICTED: far upstream el (687 aa)
initn: 4090 init1: 4090 opt: 4115 Z-score: 1643.3 bits: 314.4 E(85289): 8.5e-85
Smith-Waterman score: 4525; 96.0% identity (96.4% similar) in 670 aa overlap (1-649:1-670)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90
pF1KB7 GGQKRPLEDGD---------------------QPDAKKVAPQNDSFGTQLPPMHQQQRSV
::::::::::: ::::::::::::::::::::::::::::
XP_011 GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQRSV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 KRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMV
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 MIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 PIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIIT
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 DLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIK
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 SISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPH
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 GPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQ
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB7 APPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQV
550 560 570 580 590 600
580 590 600 610 620 630
pF1KB7 DYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPA
610 620 630 640 650 660
640 650
pF1KB7 PQCRFDPASIELAL
::: :...
XP_011 PQCLPRPSTLGSAAKSTSAEDAASTKS
670 680
>>XP_011540693 (OMIM: 603444) PREDICTED: far upstream el (688 aa)
initn: 4398 init1: 3923 opt: 4103 Z-score: 1638.6 bits: 313.6 E(85289): 1.6e-84
Smith-Waterman score: 4513; 95.8% identity (96.3% similar) in 671 aa overlap (1-649:1-671)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90
pF1KB7 GGQKRPLEDGD---------------------QPDAKKVAPQNDSFGTQLPPMHQQQ-RS
::::::::::: ::::::::::::::::::::::::: ::
XP_011 GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRS
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEII
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB7 QAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQ
550 560 570 580 590 600
580 590 600 610 620 630
pF1KB7 VDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP
610 620 630 640 650 660
640 650
pF1KB7 APQCRFDPASIELAL
:::: :...
XP_011 APQCLPRPSTLGSAAKSTSAEDAASTKS
670 680
>>XP_016858228 (OMIM: 603444) PREDICTED: far upstream el (688 aa)
initn: 4398 init1: 3923 opt: 4103 Z-score: 1638.6 bits: 313.6 E(85289): 1.6e-84
Smith-Waterman score: 4513; 95.8% identity (96.3% similar) in 671 aa overlap (1-649:1-671)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90
pF1KB7 GGQKRPLEDGD---------------------QPDAKKVAPQNDSFGTQLPPMHQQQ-RS
::::::::::: ::::::::::::::::::::::::: ::
XP_016 GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRS
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEII
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB7 QAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQ
550 560 570 580 590 600
580 590 600 610 620 630
pF1KB7 VDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP
610 620 630 640 650 660
640 650
pF1KB7 APQCRFDPASIELAL
:::: :...
XP_016 APQCLPRPSTLGSAAKSTSAEDAASTKS
670 680
>>XP_016858231 (OMIM: 603444) PREDICTED: far upstream el (664 aa)
initn: 4077 init1: 4077 opt: 4096 Z-score: 1636.0 bits: 313.0 E(85289): 2.2e-84
Smith-Waterman score: 4506; 96.8% identity (96.8% similar) in 662 aa overlap (1-641:1-662)
10 20 30 40 50 60
pF1KB7 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
10 20 30 40 50 60
70 80 90
pF1KB7 GGQKRPLEDGD---------------------QPDAKKVAPQNDSFGTQLPPMHQQQRSV
::::::::::: ::::::::::::::::::::::::::::
XP_016 GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQRSV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 KRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMV
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 MIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 PIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIIT
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 DLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIK
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 SISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPH
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 GPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQ
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB7 APPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQV
550 560 570 580 590 600
580 590 600 610 620 630
pF1KB7 DYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPA
610 620 630 640 650 660
640 650
pF1KB7 PQCRFDPASIELAL
::
XP_016 PQGQ
653 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 15:51:34 2016 done: Mon Nov 7 15:51:36 2016
Total Scan time: 11.220 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]