Result of FASTA (omim) for
pFN21AB7883
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7883, 579 aa
1>>>pF1KB7883 579 - 579 aa - 579 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2812+/-0.000329; mu= 7.0122+/- 0.021
mean_var=203.7132+/-42.287, 0's: 0 Z-trim(122.6): 32 B-trim: 875 in 1/52
Lambda= 0.089860
statistics sampled from 40974 (41006) to 40974 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.481), width: 16
Scan time: 12.500
The best scores are: opt bits E(85289)
NP_006500 (OMIM: 604758) transcription factor RelB ( 579) 4018 533.4 7.7e-151
XP_005259184 (OMIM: 604758) PREDICTED: transcripti ( 576) 3983 528.9 1.8e-149
XP_005259185 (OMIM: 604758) PREDICTED: transcripti ( 507) 2290 309.3 1.9e-83
NP_068810 (OMIM: 164014) transcription factor p65 ( 551) 1142 160.5 1.3e-38
NP_001138610 (OMIM: 164014) transcription factor p ( 548) 1133 159.4 2.9e-38
NP_001230914 (OMIM: 164014) transcription factor p ( 448) 1115 157.0 1.2e-37
NP_001230913 (OMIM: 164014) transcription factor p ( 482) 1094 154.3 8.7e-37
XP_016860116 (OMIM: 164910) PREDICTED: proto-oncog ( 564) 975 138.9 4.3e-32
NP_001278675 (OMIM: 164910) proto-oncogene c-Rel i ( 587) 975 138.9 4.4e-32
NP_002899 (OMIM: 164910) proto-oncogene c-Rel isof ( 619) 975 138.9 4.6e-32
XP_011543508 (OMIM: 164014) PREDICTED: transcripti ( 480) 786 114.3 9.1e-25
XP_011531312 (OMIM: 164910) PREDICTED: proto-oncog ( 489) 672 99.6 2.6e-20
XP_011543509 (OMIM: 164014) PREDICTED: transcripti ( 445) 600 90.2 1.6e-17
NP_001158884 (OMIM: 164011,616576) nuclear factor ( 968) 529 81.3 1.6e-14
NP_001306155 (OMIM: 164011,616576) nuclear factor ( 968) 529 81.3 1.6e-14
NP_003989 (OMIM: 164011,616576) nuclear factor NF- ( 969) 529 81.3 1.6e-14
XP_011530308 (OMIM: 164011,616576) PREDICTED: nucl ( 976) 529 81.3 1.6e-14
XP_011538133 (OMIM: 164012,615577) PREDICTED: nucl ( 755) 477 74.4 1.5e-12
XP_011538132 (OMIM: 164012,615577) PREDICTED: nucl ( 755) 477 74.4 1.5e-12
NP_002493 (OMIM: 164012,615577) nuclear factor NF- ( 899) 477 74.5 1.7e-12
NP_001248332 (OMIM: 164012,615577) nuclear factor ( 899) 477 74.5 1.7e-12
NP_001275653 (OMIM: 164012,615577) nuclear factor ( 899) 477 74.5 1.7e-12
NP_001070962 (OMIM: 164012,615577) nuclear factor ( 900) 477 74.5 1.7e-12
NP_001309863 (OMIM: 164012,615577) nuclear factor ( 900) 477 74.5 1.7e-12
XP_016871767 (OMIM: 164012,615577) PREDICTED: nucl (1081) 477 74.6 1.9e-12
XP_011530310 (OMIM: 164011,616576) PREDICTED: nucl ( 916) 411 66.0 6.3e-10
NP_001309864 (OMIM: 164012,615577) nuclear factor ( 858) 346 57.5 2.1e-07
>>NP_006500 (OMIM: 604758) transcription factor RelB [Ho (579 aa)
initn: 4018 init1: 4018 opt: 4018 Z-score: 2829.0 bits: 533.4 E(85289): 7.7e-151
Smith-Waterman score: 4018; 100.0% identity (100.0% similar) in 579 aa overlap (1-579:1-579)
10 20 30 40 50 60
pF1KB7 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ
490 500 510 520 530 540
550 560 570
pF1KB7 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT
:::::::::::::::::::::::::::::::::::::::
NP_006 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT
550 560 570
>>XP_005259184 (OMIM: 604758) PREDICTED: transcription f (576 aa)
initn: 3669 init1: 3669 opt: 3983 Z-score: 2804.5 bits: 528.9 E(85289): 1.8e-149
Smith-Waterman score: 3983; 99.5% identity (99.5% similar) in 579 aa overlap (1-579:1-576)
10 20 30 40 50 60
pF1KB7 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_005 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRST---EIIDEY
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB7 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB7 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB7 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB7 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB7 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB7 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ
480 490 500 510 520 530
550 560 570
pF1KB7 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT
:::::::::::::::::::::::::::::::::::::::
XP_005 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT
540 550 560 570
>>XP_005259185 (OMIM: 604758) PREDICTED: transcription f (507 aa)
initn: 2340 init1: 2290 opt: 2290 Z-score: 1619.1 bits: 309.3 E(85289): 1.9e-83
Smith-Waterman score: 3376; 87.6% identity (87.6% similar) in 579 aa overlap (1-579:1-507)
10 20 30 40 50 60
pF1KB7 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV
::::::::::::::::::::::::::::::
XP_005 SELRICRINKESGPCTGGEELYLLCDKVQK------------------------------
310 320 330
370 380 390 400 410 420
pF1KB7 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG
::::::::::::::::::
XP_005 ------------------------------------------DSYGVDKKRKRGMPDVLG
340
430 440 450 460 470 480
pF1KB7 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB7 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ
410 420 430 440 450 460
550 560 570
pF1KB7 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT
:::::::::::::::::::::::::::::::::::::::
XP_005 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT
470 480 490 500
>>NP_068810 (OMIM: 164014) transcription factor p65 isof (551 aa)
initn: 1080 init1: 736 opt: 1142 Z-score: 814.3 bits: 160.5 E(85289): 1.3e-38
Smith-Waterman score: 1142; 42.4% identity (68.4% similar) in 446 aa overlap (114-552:7-436)
90 100 110 120 130 140
pF1KB7 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY
:. :: :. . :.. : ::::::::::::
NP_068 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY
10 20 30
150 160 170 180 190 200
pF1KB7 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD
.::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: :::::
NP_068 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB7 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD
: ::. ...: : :::.:::::::.:...: :: ..:: . .:... ... . :
NP_068 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYD
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB7 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY
.:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:..
NP_068 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB7 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ
::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :.
NP_068 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR
220 230 240 250 260 270
390 400 410 420 430 440
pF1KB7 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAIL
: .: :::. : ::: : . ...:::: . . ...: : . : :
NP_068 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPR----PPPR
280 290 300 310 320
450 460 470 480 490
pF1KB7 DHFLPNHGSGPFLPPSALLPDPDFFSGTVS------LPGLEPPGGPDLLDDGFAYDPTAP
.:...:. :. :.: :....: .: . :.: .... : :. :
NP_068 RIAVPSRSSASVPKPA---PQPYPFTSSLSTINYDEFPTMVFPSGQ--ISQASALAPAPP
330 340 350 360 370 380
500 510 520 530 540 550
pF1KB7 TLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQAPGPGDGGTASLVGSN
.. . ::: .::.. . . :. .::: : .. . :: : ..: ..:
NP_068 QVLPQAPAPAPAPAMVSALAQAPAPVPVL--APGP-PQAV-APPAPKPTQAGEGTLSEAL
390 400 410 420 430 440
560 570
pF1KB7 MFPNHYREAAFGGGLLSPGPEAT
NP_068 LQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAI
450 460 470 480 490 500
>>NP_001138610 (OMIM: 164014) transcription factor p65 i (548 aa)
initn: 975 init1: 614 opt: 1133 Z-score: 808.0 bits: 159.4 E(85289): 2.9e-38
Smith-Waterman score: 1133; 42.4% identity (68.2% similar) in 446 aa overlap (114-552:7-433)
90 100 110 120 130 140
pF1KB7 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY
:. :: :. . :.. : ::::::::::::
NP_001 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY
10 20 30
150 160 170 180 190 200
pF1KB7 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD
.::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: :::::
NP_001 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB7 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD
: ::. ...: : :::.:::::::.:...: :: ..:: . .:.. ... . :
NP_001 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQE---EQRGDYD
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB7 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY
.:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:..
NP_001 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB7 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ
::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :.
NP_001 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR
220 230 240 250 260 270
390 400 410 420 430 440
pF1KB7 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAIL
: .: :::. : ::: : . ...:::: . . ...: : . : :
NP_001 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPR----PPPR
280 290 300 310 320
450 460 470 480 490
pF1KB7 DHFLPNHGSGPFLPPSALLPDPDFFSGTVS------LPGLEPPGGPDLLDDGFAYDPTAP
.:...:. :. :.: :....: .: . :.: .... : :. :
NP_001 RIAVPSRSSASVPKPA---PQPYPFTSSLSTINYDEFPTMVFPSGQ--ISQASALAPAPP
330 340 350 360 370 380
500 510 520 530 540 550
pF1KB7 TLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQAPGPGDGGTASLVGSN
.. . ::: .::.. . . :. .::: : .. . :: : ..: ..:
NP_001 QVLPQAPAPAPAPAMVSALAQAPAPVPVL--APGP-PQAV-APPAPKPTQAGEGTLSEAL
390 400 410 420 430
560 570
pF1KB7 MFPNHYREAAFGGGLLSPGPEAT
NP_001 LQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAI
440 450 460 470 480 490
>>NP_001230914 (OMIM: 164014) transcription factor p65 i (448 aa)
initn: 1046 init1: 736 opt: 1115 Z-score: 796.6 bits: 157.0 E(85289): 1.2e-37
Smith-Waterman score: 1138; 43.3% identity (66.6% similar) in 434 aa overlap (114-535:7-432)
90 100 110 120 130 140
pF1KB7 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY
:. :: :. . :.. : ::::::::::::
NP_001 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY
10 20 30
150 160 170 180 190 200
pF1KB7 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD
.::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: :::::
NP_001 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB7 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD
: ::. ...: : :::.:::::::.:...: :: ..:: . .:... ... . :
NP_001 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYD
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB7 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY
.:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:..
NP_001 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB7 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ
::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :.
NP_001 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR
220 230 240 250 260 270
390 400 410 420 430
pF1KB7 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKR----RKKK
: .: :::. : ::: : . ...:::: . . ...: : . : :
NP_001 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAV
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB7 PAILDHFLPNHGSGPFLPPSAL-------LPDPDFFSGTVSLPGLEPPGGPDLLDDGFAY
:. . .:. . :. :.: .: : :: .: . :. :..: .. :
NP_001 PSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAP
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB7 DPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQAPGPGDGGTAS
: ::.. . : :: : : :. : : : : ..
NP_001 AP-APAMVSALAQRPPDPAPAPL----GAPGLPNGLLSGDEDFSSIADMDFSALLSQISS
400 410 420 430 440
560 570
pF1KB7 LVGSNMFPNHYREAAFGGGLLSPGPEAT
>>NP_001230913 (OMIM: 164014) transcription factor p65 i (482 aa)
initn: 1087 init1: 736 opt: 1094 Z-score: 781.4 bits: 154.3 E(85289): 8.7e-37
Smith-Waterman score: 1094; 42.0% identity (64.9% similar) in 459 aa overlap (114-560:7-456)
90 100 110 120 130 140
pF1KB7 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY
:. :: :. . :.. : ::::::::::::
NP_001 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY
10 20 30
150 160 170 180 190 200
pF1KB7 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD
.::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: :::::
NP_001 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB7 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD
: ::. ...: : :::.:::::::.:...: :: ..:: . .:... ... . :
NP_001 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYD
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB7 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY
.:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:..
NP_001 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB7 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ
::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :.
NP_001 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR
220 230 240 250 260 270
390 400 410 420 430
pF1KB7 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKR----RKKK
: .: :::. : ::: : . ...:::: . . ...: : . : :
NP_001 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAV
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB7 PAILDHFLPNHGSGPFLPPSALLPDPDFFS---GTVSLPGLEPPGGPDLLDDGFAYDPTA
:. . .:. . :: : .. : : . ::.: :. . : .. . :
NP_001 PSRSSASVPKPAPGP--PQAVAPPAPKPTQAGEGTLSEALLQLQFDDEDLG-ALLGNSTD
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB7 PTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPG----PEPLTLDSYQAPGPGDGGTAS
:..:: :: . . .. .: : : :: .: : : : . :
NP_001 PAVFT--DLASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAP
400 410 420 430 440
560 570
pF1KB7 LVGSNMFPNHYREAAFGGGLLSPGPEAT
: :. .::
NP_001 L-GAPGLPNGLLSGDEDFSSIADMDFSALLSQISS
450 460 470 480
>>XP_016860116 (OMIM: 164910) PREDICTED: proto-oncogene (564 aa)
initn: 557 init1: 457 opt: 975 Z-score: 697.2 bits: 138.9 E(85289): 4.3e-32
Smith-Waterman score: 982; 45.6% identity (70.5% similar) in 353 aa overlap (125-459:8-356)
100 110 120 130 140 150
pF1KB7 LGPVAPPATPPPWGCPLGRLVSPAPGPGPQPHLVITEQPKQRGMRFRYECEGRSAGSILG
:.. : :::.::::::::.::::::::: :
XP_016 MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPG
10 20 30
160 170 180 190 200 210
pF1KB7 ESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRP
: ::. ..: :.:.. . : .:..: :: :. :.. :::.:::::: :: ....
XP_016 EHSTDNNRTYPSIQIMNYYGKGKVRIT--LVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQ
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB7 HVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAG--SLKNHQEVDMNVVRICFQA
. : :.::::.::.:::.. :: .:. ::.:.:. .:.. .. :.::::.:::.
XP_016 ERRPLF-FQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQV
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB7 SYRDQQGQMRR-MDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKE
:..:.. . ::.:.:.::... ::.::::::.::. : ::.:..::::::::.
XP_016 FLPDEHGNLTTALPPVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKD
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB7 DISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSE
:: : : .::... :::::::::.::::::::: :.:::::.. :.: .: ::
XP_016 DIEVRFVLNDWEAKGIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSE
220 230 240 250 260 270
400 410 420 430
pF1KB7 PLPFTYLPRDHDSYGVDKKRKRGM-------PDVLGELNSSD------PHGIESKRRK--
. : ::: ..:.:: :... : .: : : : :. :. ..
XP_016 SMDFRYLPDEKDTYGNKAKKQKTTLLFQKLCQDHEPNLFSHDAVVREMPTGVSSQAESYY
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB7 KKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPGGPDLLDDGFAYDPTAP
.:. .. : .:.: :: :.
XP_016 PSPGPISSGLSHHASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPSNSQGIPPFLR
340 350 360 370 380 390
>>NP_001278675 (OMIM: 164910) proto-oncogene c-Rel isofo (587 aa)
initn: 557 init1: 457 opt: 975 Z-score: 696.9 bits: 138.9 E(85289): 4.4e-32
Smith-Waterman score: 975; 50.3% identity (76.4% similar) in 292 aa overlap (125-413:8-295)
100 110 120 130 140 150
pF1KB7 LGPVAPPATPPPWGCPLGRLVSPAPGPGPQPHLVITEQPKQRGMRFRYECEGRSAGSILG
:.. : :::.::::::::.::::::::: :
NP_001 MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPG
10 20 30
160 170 180 190 200 210
pF1KB7 ESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRP
: ::. ..: :.:.. . : .:..: :: :. :.. :::.:::::: :: ....
NP_001 EHSTDNNRTYPSIQIMNYYGKGKVRIT--LVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQ
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB7 HVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAG--SLKNHQEVDMNVVRICFQA
. : :.::::.::.:::.. :: .:. ::.:.:. .:.. .. :.::::.:::.
NP_001 ERRPLF-FQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQV
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB7 SYRDQQGQMRR-MDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKE
:..:.. . ::.:.:.::... ::.::::::.::. : ::.:..::::::::.
NP_001 FLPDEHGNLTTALPPVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKD
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB7 DISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSE
:: : : .::... :::::::::.::::::::: :.:::::.. :.: .: ::
NP_001 DIEVRFVLNDWEAKGIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSE
220 230 240 250 260 270
400 410 420 430 440 450
pF1KB7 PLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAILDHFLPNHGS
. : ::: ..:.:: :...
NP_001 SMDFRYLPDEKDTYGNKAKKQKTTLLFQKLCQDHVNFPERPRPGLLGSIGEGRYFKKEPN
280 290 300 310 320 330
>>NP_002899 (OMIM: 164910) proto-oncogene c-Rel isoform (619 aa)
initn: 557 init1: 457 opt: 975 Z-score: 696.6 bits: 138.9 E(85289): 4.6e-32
Smith-Waterman score: 988; 40.9% identity (66.4% similar) in 440 aa overlap (125-552:8-428)
100 110 120 130 140 150
pF1KB7 LGPVAPPATPPPWGCPLGRLVSPAPGPGPQPHLVITEQPKQRGMRFRYECEGRSAGSILG
:.. : :::.::::::::.::::::::: :
NP_002 MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPG
10 20 30
160 170 180 190 200 210
pF1KB7 ESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRP
: ::. ..: :.:.. . : .:..: :: :. :.. :::.:::::: :: ....
NP_002 EHSTDNNRTYPSIQIMNYYGKGKVRIT--LVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQ
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB7 HVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAG--SLKNHQEVDMNVVRICFQA
. : :.::::.::.:::.. :: .:. ::.:.:. .:.. .. :.::::.:::.
NP_002 ERRPLF-FQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQV
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB7 SYRDQQGQMRR-MDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKE
:..:.. . ::.:.:.::... ::.::::::.::. : ::.:..::::::::.
NP_002 FLPDEHGNLTTALPPVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKD
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB7 DISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSE
:: : : .::... :::::::::.::::::::: :.:::::.. :.: .: ::
NP_002 DIEVRFVLNDWEAKGIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSE
220 230 240 250 260 270
400 410 420 430 440 450
pF1KB7 PLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAILDHFLPNHGS
. : ::: ..:.:: .: .:. .. .: . : .:. :. :. : . :.
NP_002 SMDFRYLPDEKDTYG-NKAKKQKTTLLFQKL--CQDH-VETGFRHVDQDGLE--LLTSGD
280 290 300 310 320
460 470 480 490 500 510
pF1KB7 GPFLPPSALLPDPDFFSG-TVSLPGLEPPGGPDLLDDGFAYDPTAPTLFTMLDLLPPAPP
: : .. .: ::..: :: . .: : :.::. .. :
NP_002 PPTLASQS--------AGITVNFPERPRPGLLGSIGEG-RYFKKEPNLFSHDAVVREMPT
330 340 350 360 370
520 530 540 550 560
pF1KB7 HASAVVCS-----GGAGAVVGETPGPEPLTLDSYQA---PGPGDGGTASLVGSNMFPNHY
.:. . : : .. ... . :: .:... : : .:.: :
NP_002 GVSSQAESYYPSPGPISSGLSHHASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPS
380 390 400 410 420 430
570
pF1KB7 REAAFGGGLLSPGPEAT
NP_002 NSQGIPPFLRIPVGNDLNASNACIYNNADDIVGMEASSMPSADLYGISDPNMLSNCSVNM
440 450 460 470 480 490
579 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:35:21 2016 done: Sun Nov 6 10:35:23 2016
Total Scan time: 12.500 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]