Result of FASTA (omim) for
pFN21AB7645
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7645, 328 aa
1>>>pF1KB7645 328 - 328 aa - 328 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7168+/-0.000319; mu= 3.5140+/- 0.020
mean_var=249.8553+/-51.408, 0's: 0 Z-trim(124.1): 236 B-trim: 2301 in 1/58
Lambda= 0.081139
statistics sampled from 44929 (45201) to 44929 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.81), E-opt: 0.2 (0.53), width: 16
Scan time: 8.770
The best scores are: opt bits E(85289)
NP_004396 (OMIM: 126255) homeobox protein DLX-2 [H ( 328) 2256 276.2 6.5e-74
NP_005212 (OMIM: 220600,600028) homeobox protein D ( 289) 783 103.7 4.8e-22
NP_005211 (OMIM: 104510,190320,600525) homeobox pr ( 287) 735 98.1 2.3e-20
XP_016867292 (OMIM: 220600,600028) PREDICTED: home ( 161) 548 76.0 6e-14
XP_005250242 (OMIM: 220600,600028) PREDICTED: home ( 161) 548 76.0 6e-14
NP_005213 (OMIM: 600030) homeobox protein DLX-6 [H ( 293) 536 74.8 2.4e-13
NP_835221 (OMIM: 600029) homeobox protein DLX-1 is ( 255) 471 67.2 4.3e-11
NP_612138 (OMIM: 601911,616788) homeobox protein D ( 240) 426 61.9 1.6e-09
NP_001925 (OMIM: 601911,616788) homeobox protein D ( 168) 421 61.1 1.8e-09
XP_016879780 (OMIM: 601911,616788) PREDICTED: home ( 168) 421 61.1 1.8e-09
NP_002439 (OMIM: 106600,142983,189500,608874) home ( 303) 318 49.3 1.2e-05
NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 ( 354) 288 45.9 0.00015
NP_002440 (OMIM: 123101,168500,168550,604757) home ( 267) 284 45.3 0.00017
NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 285 45.5 0.00017
NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 ( 364) 285 45.5 0.0002
NP_005513 (OMIM: 142955,601536) homeobox protein H ( 335) 274 44.2 0.00046
NP_067545 (OMIM: 603260) homeobox protein BarH-lik ( 254) 268 43.4 0.00061
XP_011541345 (OMIM: 604823) PREDICTED: homeobox pr ( 233) 267 43.3 0.00062
NP_055175 (OMIM: 603245) homeobox protein Nkx-2.8 ( 239) 266 43.1 0.00069
NP_003649 (OMIM: 604823) homeobox protein BarH-lik ( 279) 267 43.3 0.00071
NP_001091639 (OMIM: 611074) brain-specific homeobo ( 233) 262 42.7 0.00093
NP_001795 (OMIM: 600746) homeobox protein CDX-1 [H ( 265) 263 42.8 0.00094
NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343) 262 42.8 0.0012
NP_005506 (OMIM: 142994,176450) motor neuron and p ( 401) 261 42.8 0.0015
NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 259 42.5 0.0015
XP_011533177 (OMIM: 600297) PREDICTED: homeobox pr ( 321) 258 42.3 0.0016
NP_003915 (OMIM: 209880,603851,613013) paired meso ( 314) 257 42.2 0.0017
XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017
NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 260 42.7 0.0017
NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 260 42.7 0.0017
XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017
XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017
XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017
XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017
XP_011533180 (OMIM: 600297) PREDICTED: homeobox pr ( 204) 251 41.3 0.0021
NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 255 42.0 0.0022
NP_055377 (OMIM: 600036) homeobox protein OTX1 [Ho ( 354) 254 41.9 0.0024
NP_001186699 (OMIM: 600036) homeobox protein OTX1 ( 354) 254 41.9 0.0024
NP_001256 (OMIM: 600297) homeobox protein CDX-2 [H ( 313) 252 41.6 0.0026
NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 ( 367) 253 41.8 0.0027
NP_001180 (OMIM: 602183,613330) homeobox protein N ( 333) 250 41.4 0.0032
NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 247 41.0 0.0034
NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 247 41.0 0.0034
NP_001158727 (OMIM: 142994,176450) motor neuron an ( 189) 242 40.2 0.0041
NP_003308 (OMIM: 118700,188550,600635,610978) home ( 371) 247 41.1 0.0044
XP_011533181 (OMIM: 600297) PREDICTED: homeobox pr ( 196) 241 40.1 0.0045
NP_001073136 (OMIM: 118700,188550,600635,610978) h ( 401) 247 41.1 0.0046
NP_004378 (OMIM: 108900,187500,217095,225250,60058 ( 324) 245 40.8 0.0047
XP_016868632 (OMIM: 610772) PREDICTED: homeobox pr ( 265) 242 40.4 0.0052
NP_001980 (OMIM: 142996) homeobox even-skipped hom ( 407) 245 40.9 0.0055
>>NP_004396 (OMIM: 126255) homeobox protein DLX-2 [Homo (328 aa)
initn: 2256 init1: 2256 opt: 2256 Z-score: 1448.0 bits: 276.2 E(85289): 6.5e-74
Smith-Waterman score: 2256; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KB7 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL
250 260 270 280 290 300
310 320
pF1KB7 HPTQTPQPHHHHHHHGGGGAPVSAGTIF
::::::::::::::::::::::::::::
NP_004 HPTQTPQPHHHHHHHGGGGAPVSAGTIF
310 320
>>NP_005212 (OMIM: 220600,600028) homeobox protein DLX-5 (289 aa)
initn: 713 init1: 600 opt: 783 Z-score: 516.8 bits: 103.7 E(85289): 4.8e-22
Smith-Waterman score: 783; 52.6% identity (70.7% similar) in 270 aa overlap (43-302:23-280)
20 30 40 50 60 70
pF1KB7 HSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKP-QESPTLPVSTATDSSYYTNQQ
.:...:.: ::::::: :.::::.::.
NP_005 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYS---
10 20 30 40
80 90 100 110 120
pF1KB7 HPAGGGGGGG-SPY-AHMGS----YQYQASGLNNVP--YSAKSSYDLGYTAAYTSYAPYG
:.::. : :: : .:. :::: :.:. : ::. : .:...: .:.
NP_005 -PTGGAPHGYCSPTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAY
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB7 TSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA
. :.:.:::: :::.:.:::::::::::::::::::::::::::::::::::::::
NP_005 NRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB7 ELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDF
:::::::::::::::::::.:::.::. :.::.: :. :..: : :: ..:: :.
NP_005 ELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP--QSPAVWE-
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 GVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SHLQATAPLLHP
:: :.. : : :. : :.: . .. :: ....: ::: . : ::
NP_005 --PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHP
230 240 250 260 270 280
310 320
pF1KB7 TQTPQPHHHHHHHGGGGAPVSAGTIF
NP_005 LALASGTLY
>>NP_005211 (OMIM: 104510,190320,600525) homeobox protei (287 aa)
initn: 668 init1: 532 opt: 735 Z-score: 486.5 bits: 98.1 E(85289): 2.3e-20
Smith-Waterman score: 754; 47.8% identity (65.4% similar) in 295 aa overlap (42-328:17-287)
20 30 40 50 60 70
pF1KB7 MHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHK-PQESPTLPVSTATDSSYYTNQ
::: : : ..::::: :..:: .::.
NP_005 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAP
10 20 30 40
80 90 100 110 120
pF1KB7 QHPAGGGGGGG---SPYAHMGSYQYQASGLNNV-PYSAKSSYDLGYTAAYTSYAPYGTSS
:: .: : .::.. .:.. .:: .. :: :: : : :.: .:. : .
NP_005 QHDYYSGQPYGQTVNPYTY--HHQFNLNGLAGTGAYSPKSEYTYG--ASYRQYGAYREQP
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB7 SPANNEPE-KEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAEL
::.. ::. : :.:.:::::::::::::::::.:::::::::::.:::::::::::
NP_005 LPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAEL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB7 AASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDFGV
::.:::::::::::::::::::::..:.::.: :. :. : : : ::: .:: ::
NP_005 AAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPP--SPALWD---
170 180 190 200 210
250 260 270 280 290 300
pF1KB7 PQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGN--YPWYHQTSGSASHLQATAPLLHPT
.. . :. . : : ::. ..: . ::: . :. :::
NP_005 ---TSSHSTPAPARSQLPPP--LPYSASPSYLDDPTNSWYHAQNLSGPHLQQ--------
220 230 240 250 260
310 320
pF1KB7 QTPQPHHHHHHHGGGGAPVSAGTIF
: ::: : :.. : : . :...
NP_005 QPPQPATLH--HASPGPPPNPGAVY
270 280
>>XP_016867292 (OMIM: 220600,600028) PREDICTED: homeobox (161 aa)
initn: 509 init1: 483 opt: 548 Z-score: 371.4 bits: 76.0 E(85289): 6e-14
Smith-Waterman score: 548; 58.8% identity (73.8% similar) in 160 aa overlap (144-302:1-152)
120 130 140 150 160 170
pF1KB7 AAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQK
.:::::::::::::::::::::::::::::
XP_016 MVNGKPKKVRKPRTIYSSFQLAALQRRFQK
10 20 30
180 190 200 210 220 230
pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASP
:::::::::::::::::::::::::::::.:::.::. :.::.: :. :..: : ::
XP_016 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB7 PVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SH
..:: :. :: :.. : : :. : :.: . .. :: ....: ::
XP_016 --QSPAVWE---PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSH
100 110 120 130 140
300 310 320
pF1KB7 LQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF
: . : ::
XP_016 LPPPGSLQHPLALASGTLY
150 160
>>XP_005250242 (OMIM: 220600,600028) PREDICTED: homeobox (161 aa)
initn: 509 init1: 483 opt: 548 Z-score: 371.4 bits: 76.0 E(85289): 6e-14
Smith-Waterman score: 548; 58.8% identity (73.8% similar) in 160 aa overlap (144-302:1-152)
120 130 140 150 160 170
pF1KB7 AAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQK
.:::::::::::::::::::::::::::::
XP_005 MVNGKPKKVRKPRTIYSSFQLAALQRRFQK
10 20 30
180 190 200 210 220 230
pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASP
:::::::::::::::::::::::::::::.:::.::. :.::.: :. :..: : ::
XP_005 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB7 PVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SH
..:: :. :: :.. : : :. : :.: . .. :: ....: ::
XP_005 --QSPAVWE---PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSH
100 110 120 130 140
300 310 320
pF1KB7 LQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF
: . : ::
XP_005 LPPPGSLQHPLALASGTLY
150 160
>>NP_005213 (OMIM: 600030) homeobox protein DLX-6 [Homo (293 aa)
initn: 504 init1: 399 opt: 536 Z-score: 360.5 bits: 74.8 E(85289): 2.4e-13
Smith-Waterman score: 536; 41.9% identity (63.3% similar) in 248 aa overlap (24-269:40-282)
10 20 30 40 50
pF1KB7 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQES
.:.:::: : .:..:: .
NP_005 GLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQPPPPPPPPPQPHSQQSSPAMAGAHY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 PTLPVSTATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYT
: . .:. .. ...: ::::: :. .:. .: :: ..:...
NP_005 PLHCLHSAAAAAAAGSHHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMSHSQHSPYLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 AAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQK
. ..: : : .. .... . :::. ::: ::.:::::::::.:: ::..:::.
NP_005 SYHNSSAAAQTRGDDTDQQKTTVIENGEIRF-NGKGKKIRKPRTIYSSLQLQALNHRFQQ
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHP--GASASPPCA
:::::::::::::::::::::::::::::.::::::. :.: : :. : :..: :
NP_005 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLQGSAALSP-R
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 SPPVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSAS
:: . : :: .. . .. :.: : . :::
NP_005 SPAL--PPVWDVSASAKGVSMP-PNSYMPGYSHWYSSPHQDTMQRPQMM
250 260 270 280 290
300 310 320
pF1KB7 HLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF
>>NP_835221 (OMIM: 600029) homeobox protein DLX-1 isofor (255 aa)
initn: 426 init1: 394 opt: 471 Z-score: 320.1 bits: 67.2 E(85289): 4.3e-11
Smith-Waterman score: 471; 44.4% identity (63.8% similar) in 232 aa overlap (51-275:29-248)
30 40 50 60 70 80
pF1KB7 STYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVSTATDSSYYTNQQHPAGGGGGG
: ::. :.: . : . : :: .
NP_835 MTMTTMPESLNSPVSGKAVFMEFGPPNQQMSPS-PMS---HGHYSMHCLHSAGHSQPD
10 20 30 40 50
90 100 110 120 130
pF1KB7 GSPYAHMGSYQYQASG--LNNVPYSAKSSYDLGYTAAYTSYAPYGTSS--SPANNEPEKE
:. :. .:.. . .:.: :.: : .. . .: . : . : .:. . ..
NP_835 GA-YSSASSFSRPLGYPYVNSVSSHASSPY-ISSVQSYPGSASLAQSRLEDPGADSEKST
60 70 80 90 100 110
140 150 160 170 180 190
pF1KB7 DLEP-EIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ
.: :.:. ::: ::.:::::::::.:: ::.::::.::::::::::::::::::::::
NP_835 VVEGGEVRF-NGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQ
120 130 140 150 160 170
200 210 220 230 240 250
pF1KB7 VKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCA-SPPVSAPASWDFGVPQRMAGGGG
:::::::.::::::. :.: : :.. : :::: : .:. :. .: :.
NP_835 VKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSAGSPPV--PPGWN---PNSSSGKGS
180 190 200 210 220
260 270 280 290 300 310
pF1KB7 PGSGGSGAGSSGS-SPSSAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHH
:..:: : : ::. :
NP_835 GGNAGSYIPSYTSWYPSAHQEAMQQPQLM
230 240 250
>>NP_612138 (OMIM: 601911,616788) homeobox protein DLX-4 (240 aa)
initn: 360 init1: 337 opt: 426 Z-score: 292.0 bits: 61.9 E(85289): 1.6e-09
Smith-Waterman score: 426; 46.0% identity (64.0% similar) in 189 aa overlap (83-264:50-224)
60 70 80 90 100 110
pF1KB7 SPTLPVSTATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGY
::.:. :: : : . .::
NP_612 DLAPVPSVAAAYPLGLSPTTAASPNLSYSRPYGHLLSYPYTE------PANPGDSYLSCQ
20 30 40 50 60 70
120 130 140 150 160
pF1KB7 TAAYTSYAPYGTSSSP----ANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQ
: : : . : :..: . . :: : .. ::.:::::::::.:: :.
NP_612 QPAALSQPLCGPAEHPQELEADSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHLN
80 90 100 110 120 130
170 180 190 200 210 220
pF1KB7 RRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSE-QHPGASAS
.:::.::::::::::.:::.::::::::::::::.:::.::. :.. .: . :: . :
NP_612 QRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTFS
140 150 160 170 180 190
230 240 250 260 270 280
pF1KB7 -PPCASPPVSAPASWDFGVPQRMAGGGGPGSG-GSGAGSSGSSPSSAASAFLGNYPWYHQ
:: :::. :. ::. :. .: : :: :.. :.
NP_612 VSPC-SPPL--PSLWDL--PK---AGTLPTSGYGNSFGAWYQHHSSDVLASPQMM
200 210 220 230 240
290 300 310 320
pF1KB7 TSGSASHLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF
>>NP_001925 (OMIM: 601911,616788) homeobox protein DLX-4 (168 aa)
initn: 404 init1: 365 opt: 421 Z-score: 290.8 bits: 61.1 E(85289): 1.8e-09
Smith-Waterman score: 421; 52.0% identity (72.3% similar) in 148 aa overlap (120-264:13-152)
90 100 110 120 130 140
pF1KB7 YQYQASGLNNVPYSAKSSYDLGYTAAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKP
::: . : ..: . . :: : ..
NP_001 MKLSVLPPRSLLAPYTVLCCPPDSEKPRLSPEPSERRPQAPA
10 20 30 40
150 160 170 180 190 200
pF1KB7 KKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKK
::.:::::::::.:: :..:::.::::::::::.:::.::::::::::::::.:::.::
NP_001 KKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKK
50 60 70 80 90 100
210 220 230 240 250 260
pF1KB7 MWKSGEIPSE-QHPGASAS-PPCASPPVSAPASWDFGVPQRMAGGGGPGSG-GSGAGSSG
. :.. .: . :: . : :: :::. :. ::. :. .: : :: :.. :.
NP_001 LLKQNSGGQEGDFPGRTFSVSPC-SPPL--PSLWDL--PK---AGTLPTSGYGNSFGAWY
110 120 130 140 150
270 280 290 300 310 320
pF1KB7 SSPSSAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGT
NP_001 QHHSSDVLASPQMM
160
>>XP_016879780 (OMIM: 601911,616788) PREDICTED: homeobox (168 aa)
initn: 404 init1: 365 opt: 421 Z-score: 290.8 bits: 61.1 E(85289): 1.8e-09
Smith-Waterman score: 421; 52.0% identity (72.3% similar) in 148 aa overlap (120-264:13-152)
90 100 110 120 130 140
pF1KB7 YQYQASGLNNVPYSAKSSYDLGYTAAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKP
::: . : ..: . . :: : ..
XP_016 MKLSVLPPRSLLAPYTVLCCPPDSEKPRLSPEPSERRPQAPA
10 20 30 40
150 160 170 180 190 200
pF1KB7 KKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKK
::.:::::::::.:: :..:::.::::::::::.:::.::::::::::::::.:::.::
XP_016 KKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKK
50 60 70 80 90 100
210 220 230 240 250 260
pF1KB7 MWKSGEIPSE-QHPGASAS-PPCASPPVSAPASWDFGVPQRMAGGGGPGSG-GSGAGSSG
. :.. .: . :: . : :: :::. :. ::. :. .: : :: :.. :.
XP_016 LLKQNSGGQEGDFPGRTFSVSPC-SPPL--PSLWDL--PK---AGTLPTSGYGNSFGAWY
110 120 130 140 150
270 280 290 300 310 320
pF1KB7 SSPSSAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGT
XP_016 QHHSSDVLASPQMM
160
328 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:30:30 2016 done: Sun Nov 6 05:30:32 2016
Total Scan time: 8.770 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]