Result of FASTA (omim) for
pFN21AB7626
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7626, 372 aa
1>>>pF1KB7626 372 - 372 aa - 372 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.6740+/-0.000334; mu= -1.1521+/- 0.021
mean_var=272.9659+/-54.850, 0's: 0 Z-trim(123.8): 15 B-trim: 0 in 0/59
Lambda= 0.077628
statistics sampled from 44337 (44353) to 44337 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.52), width: 16
Scan time: 8.800
The best scores are: opt bits E(85289)
NP_003642 (OMIM: 603437) Y-box-binding protein 3 i ( 372) 2538 296.8 5.3e-80
XP_016875611 (OMIM: 603437) PREDICTED: Y-box-bindi ( 369) 2500 292.6 1e-78
NP_001138898 (OMIM: 603437) Y-box-binding protein ( 303) 1313 159.5 9e-39
XP_016875612 (OMIM: 603437) PREDICTED: Y-box-bindi ( 300) 1282 156.1 9.9e-38
XP_011519173 (OMIM: 603437) PREDICTED: Y-box-bindi ( 200) 1248 152.1 1e-36
NP_004550 (OMIM: 154030) nuclease-sensitive elemen ( 324) 780 99.9 8.8e-21
NP_057066 (OMIM: 611447) Y-box-binding protein 2 [ ( 364) 746 96.1 1.4e-19
XP_016880202 (OMIM: 611447) PREDICTED: Y-box-bindi ( 379) 448 62.8 1.5e-09
>>NP_003642 (OMIM: 603437) Y-box-binding protein 3 isofo (372 aa)
initn: 2538 init1: 2538 opt: 2538 Z-score: 1557.3 bits: 296.8 E(85289): 5.3e-80
Smith-Waterman score: 2538; 99.7% identity (100.0% similar) in 372 aa overlap (1-372:1-372)
10 20 30 40 50 60
pF1KB7 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 APAATGTAAAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
NP_003 APAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 YYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 HVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 HVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPRPR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTE
310 320 330 340 350 360
370
pF1KB7 NPAPPTQQSSAE
::::::::::::
NP_003 NPAPPTQQSSAE
370
>>XP_016875611 (OMIM: 603437) PREDICTED: Y-box-binding p (369 aa)
initn: 2502 init1: 1949 opt: 2500 Z-score: 1534.3 bits: 292.6 E(85289): 1e-78
Smith-Waterman score: 2500; 98.9% identity (99.2% similar) in 372 aa overlap (1-372:1-369)
10 20 30 40 50 60
pF1KB7 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 APAATGTAAAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
XP_016 APAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 YYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 HVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPRPR
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
XP_016 HVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQLQGPVHRNPTYRP---SRGPPRPR
250 260 270 280 290
310 320 330 340 350 360
pF1KB7 PAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTE
300 310 320 330 340 350
370
pF1KB7 NPAPPTQQSSAE
::::::::::::
XP_016 NPAPPTQQSSAE
360
>>NP_001138898 (OMIM: 603437) Y-box-binding protein 3 is (303 aa)
initn: 2030 init1: 1248 opt: 1313 Z-score: 817.1 bits: 159.5 E(85289): 9e-39
Smith-Waterman score: 1896; 81.2% identity (81.5% similar) in 372 aa overlap (1-372:1-303)
10 20 30 40 50 60
pF1KB7 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 APAATGTAAAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
NP_001 APAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 YYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPY
:::::::::::
NP_001 YYGRRRGPPRN-------------------------------------------------
190
250 260 270 280 290 300
pF1KB7 HVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPRPR
::::::::::::::::::::::::::::::::::::::::
NP_001 --------------------AGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPRPR
200 210 220 230
310 320 330 340 350 360
pF1KB7 PAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTE
240 250 260 270 280 290
370
pF1KB7 NPAPPTQQSSAE
::::::::::::
NP_001 NPAPPTQQSSAE
300
>>XP_016875612 (OMIM: 603437) PREDICTED: Y-box-binding p (300 aa)
initn: 1994 init1: 1248 opt: 1282 Z-score: 798.3 bits: 156.1 E(85289): 9.9e-38
Smith-Waterman score: 1858; 80.4% identity (80.6% similar) in 372 aa overlap (1-372:1-300)
10 20 30 40 50 60
pF1KB7 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 APAATGTAAAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
XP_016 APAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 YYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPY
:::::::::::
XP_016 YYGRRRGPPRN-------------------------------------------------
190
250 260 270 280 290 300
pF1KB7 HVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPRPR
::::::::::::::::::::::::::::: ::::::::
XP_016 --------------------AGEIGEMKDGVPEGAQLQGPVHRNPTYRP---SRGPPRPR
200 210 220
310 320 330 340 350 360
pF1KB7 PAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTE
230 240 250 260 270 280
370
pF1KB7 NPAPPTQQSSAE
::::::::::::
XP_016 NPAPPTQQSSAE
290 300
>>XP_011519173 (OMIM: 603437) PREDICTED: Y-box-binding p (200 aa)
initn: 1248 init1: 1248 opt: 1248 Z-score: 780.1 bits: 152.1 E(85289): 1e-36
Smith-Waterman score: 1248; 99.5% identity (100.0% similar) in 191 aa overlap (1-191:1-191)
10 20 30 40 50 60
pF1KB7 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 APAATGTAAAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
XP_011 APAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 YYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPY
:::::::::::
XP_011 YYGRRRGPPRNISDVWFNRR
190 200
>>NP_004550 (OMIM: 154030) nuclease-sensitive element-bi (324 aa)
initn: 1013 init1: 609 opt: 780 Z-score: 494.1 bits: 99.9 E(85289): 8.8e-21
Smith-Waterman score: 1093; 57.7% identity (71.6% similar) in 338 aa overlap (41-372:10-324)
20 30 40 50 60
pF1KB7 TTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPA-PAAHVAGN-PGGDAAPAATGTA
: :: :: :: .: . :: .. :..:
NP_004 MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGP
10 20 30
70 80 90 100 110 120
pF1KB7 AAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNP
.. . :: :: ..:::.:::::::::::::::::::::::::::::::::::::::::
NP_004 GGLTSAAPAG---GDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNP
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB7 RKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGP
:::::::::::::::::::::::::::::::: ::::.::.::::: .::: : :::::
NP_004 RKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHYRR--YPRRRGP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB7 PRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPYHVGQTFDR
:::: . .. :: .. . : . : : ::: ::.::::::.. . . :
NP_004 PRNYQQNYQNSESGEKNEGSESAPEGQ-----AQQRRP-----YRRRRFPPYYMRRPYGR
160 170 180 190 200
250 260 270 280 290 300
pF1KB7 RSRVLPHPNRIQAGEIGEMKDGVPEGAQLQG-PVHRNPT--YRPRYRSRGPPRPRPAPAV
: . : .: ::. : :. .:: :: ::..: ::::.: ::::: :
NP_004 RPQYSNPP--VQ-GEVMEGADN--QGAGEQGRPVRQNMYRGYRPRFR-RGPPRQRQPRED
210 220 230 240 250
310 320 330 340 350 360
pF1KB7 GEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTENP-AP
:. :::::: . .:: :: ::: .::::: :: : :::::.::.. :.:: ::
NP_004 GNEEDKENQGDETQGQQPPQRR-YRRNFNYRRR-RPENPKPQDGKETKAADPPAENSSAP
260 270 280 290 300 310
370
pF1KB7 PTQQSSAE
..:..::
NP_004 EAEQGGAE
320
>>NP_057066 (OMIM: 611447) Y-box-binding protein 2 [Homo (364 aa)
initn: 659 init1: 590 opt: 746 Z-score: 472.8 bits: 96.1 E(85289): 1.4e-19
Smith-Waterman score: 843; 46.2% identity (64.3% similar) in 381 aa overlap (1-366:1-360)
10 20 30 40 50
pF1KB7 MSE---AGEATTTTTTTLPQAPTEAAAAAPQDPA--PKSPVGSGAPQAAAPAPAAHVAGN
::: :. ::.. ..:.: . . ..:.. :: :.. :.:. .:: .::: . .
NP_057 MSEVEAAAGATAVPAATVPATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 PGGDAAPAATGTAAAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKED
::. . :. .::.... : : :. :.: ::: .:::::::::::::::::::::::::
NP_057 PGSRT-PGNPATAVSGTPAPPARSQ-ADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKED
70 80 90 100 110
120 130 140 150 160 170
pF1KB7 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR
:::::::::.:::::.:::::::::::::::::::::::.::::: ::::.::::: .::
NP_057 VFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 RYRRGYYGR--RRGPPRNYAGEEEEEGSG-SSEGFDPPATDRQFSGARNQLRRPQYRPQY
. :: . : .:: : : :.: .:.: : : :: : :: . :
NP_057 KSRR-FIPRPPSVAPPPMVA-EIPSAGTGPGSKG--ERAED---SGQRP--RR--WCP--
180 190 200 210 220
240 250 260 270 280 290
pF1KB7 RQRRFPPYHVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVP-EGAQLQGPVHRNPT-YRPR
::. . : : : . . :.. . : :. .: :: : :: . : .:::
NP_057 -----PPFFYRRRFVRGPRPPNQQQPIEGTDRVEPKETAPLEGHQQQGDERVPPPRFRPR
230 240 250 260 270 280
300 310 320 330 340
pF1KB7 YRSRGPPRPRPAPAV--GEAEDKENQQATSGPNQPSVRRGYRRPYNYRRR---PRPPNAP
:: :::: :.. :..: : .: ..: ..: .: ::: ::: : : .::
NP_057 YRRPFRPRPRQQPTTEGGDGETKPSQGPADG-SRPEPQRPRNRPYFQRRRQQAPGPQQAP
290 300 310 320 330
350 360 370
pF1KB7 SQDGKEAKAGEAPTENPAPPTQQSSAE
. : ::... : :
NP_057 GPRQPAAPETSAPVNSGDPTTTILE
340 350 360
>>XP_016880202 (OMIM: 611447) PREDICTED: Y-box-binding p (379 aa)
initn: 457 init1: 337 opt: 448 Z-score: 292.2 bits: 62.8 E(85289): 1.5e-09
Smith-Waterman score: 803; 44.4% identity (61.9% similar) in 396 aa overlap (1-366:1-375)
10 20 30 40 50
pF1KB7 MSE---AGEATTTTTTTLPQAPTEAAAAAPQDPA--PKSPVGSGAPQAAAPAPAAHVAGN
::: :. ::.. ..:.: . . ..:.. :: :.. :.:. .:: .::: . .
XP_016 MSEVEAAAGATAVPAATVPATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 PGGDAAPAATGTAAAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKED
::. . :. .::.... : : :. :.: ::: .:::::::::::::::::::::::::
XP_016 PGSRT-PGNPATAVSGTPAPPARSQ-ADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKED
70 80 90 100 110
120 130 140 150 160
pF1KB7 VFVHQ---------------TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP
::::: ::::.:::::.:::::::::::::::::::::::.:::::
XP_016 VFVHQLENHCLVERALTGTETAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGP
120 130 140 150 160 170
170 180 190 200 210
pF1KB7 DGVPVEGSRYAADRRRYRRGYYGR--RRGPPRNYAGEEEEEGSG-SSEGFDPPATDRQFS
::::.::::: .::. :: . : .:: : : :.: .:.: : : :
XP_016 GGVPVKGSRYAPNRRKSRR-FIPRPPSVAPPPMVA-EIPSAGTGPGSKG--ERAED---S
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB7 GARNQLRRPQYRPQYRQRRFPPYHVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVP-EGAQ
: : :: . : ::. . : : : . . :.. . : :. .: :: :
XP_016 GQRP--RR--WCP-------PPFFYRRRFVRGPRPPNQQQPIEGTDRVEPKETAPLEGHQ
240 250 260 270 280
280 290 300 310 320 330
pF1KB7 LQGPVHRNPT-YRPRYRSRGPPRPRPAPAV--GEAEDKENQQATSGPNQPSVRRGYRRPY
:: . : .::::: :::: :.. :..: : .: ..: ..: .: :::
XP_016 QQGDERVPPPRFRPRYRRPFRPRPRQQPTTEGGDGETKPSQGPADG-SRPEPQRPRNRPY
290 300 310 320 330
340 350 360 370
pF1KB7 NYRRR---PRPPNAPSQDGKEAKAGEAPTENPAPPTQQSSAE
::: : : .::. : ::... : :
XP_016 FQRRRQQAPGPQQAPGPRQPAAPETSAPVNSGDPTTTILE
340 350 360 370
372 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 04:08:55 2016 done: Mon Nov 7 04:08:56 2016
Total Scan time: 8.800 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]