Result of FASTA (omim) for
pFN21AB7280
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7280, 1336 aa
1>>>pF1KB7280 1336 - 1336 aa - 1336 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.7740+/-0.000555; mu= -11.7920+/- 0.035
mean_var=760.8521+/-160.811, 0's: 0 Z-trim(123.5): 572 B-trim: 3722 in 2/60
Lambda= 0.046497
statistics sampled from 42736 (43397) to 42736 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.509), width: 16
Scan time: 21.670
The best scores are: opt bits E(85289)
NP_569712 (OMIM: 120328,267750) collagen alpha-1(X (1336) 9750 670.8 1.8e-191
NP_085059 (OMIM: 120328,267750) collagen alpha-1(X (1516) 9509 654.7 1.5e-186
NP_569711 (OMIM: 120328,267750) collagen alpha-1(X (1751) 9496 653.9 2.9e-186
NP_000081 (OMIM: 120180,130020,130050) collagen al (1466) 1946 147.3 7.6e-34
XP_016869755 (OMIM: 120215,130000) PREDICTED: coll (1715) 1919 145.6 2.9e-33
NP_001265003 (OMIM: 120215,130000) collagen alpha- (1838) 1919 145.6 3.1e-33
NP_000084 (OMIM: 120215,130000) collagen alpha-1(V (1838) 1919 145.6 3.1e-33
XP_016884752 (OMIM: 301050,303630) PREDICTED: coll (1136) 1895 143.7 6.9e-33
NP_203699 (OMIM: 301050,303630) collagen alpha-5(I (1691) 1895 144.0 8.9e-33
XP_011529151 (OMIM: 301050,303630) PREDICTED: coll (1696) 1895 144.0 8.9e-33
XP_016855826 (OMIM: 120280,154780,228520,603932,60 (1323) 1875 142.5 1.9e-32
XP_016855825 (OMIM: 120280,154780,228520,603932,60 (1515) 1875 142.6 2.1e-32
NP_542197 (OMIM: 120280,154780,228520,603932,60484 (1690) 1875 142.6 2.3e-32
NP_001177638 (OMIM: 120280,154780,228520,603932,60 (1767) 1875 142.6 2.3e-32
NP_001845 (OMIM: 120280,154780,228520,603932,60484 (1806) 1875 142.6 2.4e-32
NP_542196 (OMIM: 120280,154780,228520,603932,60484 (1818) 1875 142.7 2.4e-32
XP_016855824 (OMIM: 120280,154780,228520,603932,60 (1855) 1875 142.7 2.4e-32
XP_016855823 (OMIM: 120280,154780,228520,603932,60 (1857) 1875 142.7 2.4e-32
XP_005257115 (OMIM: 114000,120150,130000,130060,16 (1374) 1862 141.6 3.6e-32
XP_011508875 (OMIM: 120190,130000) PREDICTED: coll (1453) 1852 141.0 6e-32
NP_000384 (OMIM: 120190,130000) collagen alpha-2(V (1499) 1852 141.0 6.1e-32
XP_016855827 (OMIM: 120326) PREDICTED: collagen al (1593) 1829 139.5 1.8e-31
NP_000486 (OMIM: 301050,303630) collagen alpha-5(I (1685) 1810 138.3 4.6e-31
XP_016884749 (OMIM: 301050,303630) PREDICTED: coll (1690) 1810 138.3 4.6e-31
XP_011508867 (OMIM: 120131,203780) PREDICTED: coll (1424) 1807 138.0 4.8e-31
XP_011508871 (OMIM: 120131,203780) PREDICTED: coll (1414) 1803 137.7 5.7e-31
XP_016858789 (OMIM: 120131,203780) PREDICTED: coll (1414) 1803 137.7 5.7e-31
XP_011508872 (OMIM: 120131,203780) PREDICTED: coll (1414) 1803 137.7 5.7e-31
XP_011508870 (OMIM: 120131,203780) PREDICTED: coll (1419) 1802 137.6 6e-31
XP_011508868 (OMIM: 120131,203780) PREDICTED: coll (1420) 1802 137.6 6e-31
XP_011508869 (OMIM: 120131,203780) PREDICTED: coll (1420) 1802 137.6 6e-31
XP_016858788 (OMIM: 120131,203780) PREDICTED: coll (1518) 1802 137.7 6.3e-31
XP_011508864 (OMIM: 120131,203780) PREDICTED: coll (1608) 1802 137.7 6.5e-31
XP_016858787 (OMIM: 120131,203780) PREDICTED: coll (1608) 1802 137.7 6.5e-31
XP_011508863 (OMIM: 120131,203780) PREDICTED: coll (1608) 1802 137.7 6.5e-31
XP_011508861 (OMIM: 120131,203780) PREDICTED: coll (1612) 1802 137.7 6.5e-31
XP_011508862 (OMIM: 120131,203780) PREDICTED: coll (1612) 1802 137.7 6.5e-31
XP_006712309 (OMIM: 120131,203780) PREDICTED: coll (1627) 1802 137.7 6.6e-31
XP_016858785 (OMIM: 120131,203780) PREDICTED: coll (1659) 1802 137.7 6.6e-31
NP_000083 (OMIM: 120131,203780) collagen alpha-4(I (1690) 1802 137.7 6.7e-31
XP_005246338 (OMIM: 120131,203780) PREDICTED: coll (1690) 1802 137.7 6.7e-31
XP_005246334 (OMIM: 104200,120070,141200,203780) P (1635) 1797 137.4 8.3e-31
XP_016884748 (OMIM: 301050,303630) PREDICTED: coll (1693) 1796 137.3 8.9e-31
XP_005246339 (OMIM: 120131,203780) PREDICTED: coll (1505) 1789 136.8 1.1e-30
XP_011519350 (OMIM: 120130,175780,180000,607595,61 (1605) 1784 136.5 1.5e-30
NP_001836 (OMIM: 120130,175780,180000,607595,61177 (1669) 1784 136.5 1.5e-30
XP_011508858 (OMIM: 104200,120070,141200,203780) P (1257) 1780 136.1 1.5e-30
XP_011508857 (OMIM: 104200,120070,141200,203780) P (1609) 1780 136.2 1.8e-30
NP_000082 (OMIM: 104200,120070,141200,203780) coll (1670) 1780 136.2 1.9e-30
XP_011508874 (OMIM: 120131,203780) PREDICTED: coll (1132) 1773 135.6 2e-30
>>NP_569712 (OMIM: 120328,267750) collagen alpha-1(XVIII (1336 aa)
initn: 9750 init1: 9750 opt: 9750 Z-score: 3558.3 bits: 670.8 E(85289): 1.8e-191
Smith-Waterman score: 9750; 100.0% identity (100.0% similar) in 1336 aa overlap (1-1336:1-1336)
10 20 30 40 50 60
pF1KB7 MAPRCPWPWPRRRRLLDVLAPLVLLLGVRAASAEPERISEEVGLLQLLGDPPPQQVTQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 MAPRCPWPWPRRRRLLDVLAPLVLLLGVRAASAEPERISEEVGLLQLLGDPPPQQVTQTD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 DPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 LGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 EEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 EEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GDDSDGASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GDDSDGASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 EQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 EQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 CLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 CLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 PQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 EALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 EALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 GPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB7 GPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB7 VPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 VPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB7 SVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 SVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQ
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB7 KGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 KGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB7 PPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 PPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFD
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB7 FLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 FLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESI
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB7 RGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 RGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGT
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB7 MGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 MGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGT
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB7 DNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 DNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSY
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB7 VHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 VHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFR
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB7 AFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 AFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKD
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB7 VLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 VLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHH
1270 1280 1290 1300 1310 1320
1330
pF1KB7 AYIVLCIENSFMTASK
::::::::::::::::
NP_569 AYIVLCIENSFMTASK
1330
>>NP_085059 (OMIM: 120328,267750) collagen alpha-1(XVIII (1516 aa)
initn: 9496 init1: 9496 opt: 9509 Z-score: 3470.3 bits: 654.7 E(85289): 1.5e-186
Smith-Waterman score: 9509; 98.3% identity (98.5% similar) in 1331 aa overlap (6-1336:189-1516)
10 20 30
pF1KB7 MAPRCPWPWPRRRRLLDVLAPLVLLLGVRAASAEP
: : : : :::. : .
NP_085 STPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGRPWAPLT---GPSVPPPSS
160 170 180 190 200 210
40 50 60 70 80 90
pF1KB7 ERISEEVGLLQLLGDPPPQQVTQTDDPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 ERISEEVGLLQLLGDPPPQQVTQTDDPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLL
220 230 240 250 260 270
100 110 120 130 140 150
pF1KB7 FHIRPATEGPGVLFAITDSAQAMVLLGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 FHIRPATEGPGVLFAITDSAQAMVLLGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRL
280 290 300 310 320 330
160 170 180 190 200 210
pF1KB7 PAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 PAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDK
340 350 360 370 380 390
220 230 240 250 260 270
pF1KB7 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP
400 410 420 430 440 450
280 290 300 310 320 330
pF1KB7 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKE
460 470 480 490 500 510
340 350 360 370 380 390
pF1KB7 GGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 GGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPP
520 530 540 550 560 570
400 410 420 430 440 450
pF1KB7 GRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 GRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPG
580 590 600 610 620 630
460 470 480 490 500 510
pF1KB7 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDV
640 650 660 670 680 690
520 530 540 550 560 570
pF1KB7 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGP
700 710 720 730 740 750
580 590 600 610 620 630
pF1KB7 AGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 AGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPP
760 770 780 790 800 810
640 650 660 670 680 690
pF1KB7 GLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 GLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKD
820 830 840 850 860 870
700 710 720 730 740 750
pF1KB7 GVGQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 GVGQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGS
880 890 900 910 920 930
760 770 780 790 800 810
pF1KB7 PGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 PGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPG
940 950 960 970 980 990
820 830 840 850 860 870
pF1KB7 MNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 MNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGN
1000 1010 1020 1030 1040 1050
880 890 900 910 920 930
pF1KB7 QGPPGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 QGPPGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGS
1060 1070 1080 1090 1100 1110
940 950 960 970 980 990
pF1KB7 SLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 SLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSF
1120 1130 1140 1150 1160 1170
1000 1010 1020 1030 1040 1050
pF1KB7 PGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 PGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQE
1180 1190 1200 1210 1220 1230
1060 1070 1080 1090 1100 1110
pF1KB7 ELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 ELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRA
1240 1250 1260 1270 1280 1290
1120 1130 1140 1150 1160 1170
pF1KB7 DDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 DDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGG
1300 1310 1320 1330 1340 1350
1180 1190 1200 1210 1220 1230
pF1KB7 MRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 MRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPS
1360 1370 1380 1390 1400 1410
1240 1250 1260 1270 1280 1290
pF1KB7 WEALFSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 WEALFSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEA
1420 1430 1440 1450 1460 1470
1300 1310 1320 1330
pF1KB7 PSATGQASSLLGGRLLGQSAASCHHAYIVLCIENSFMTASK
:::::::::::::::::::::::::::::::::::::::::
NP_085 PSATGQASSLLGGRLLGQSAASCHHAYIVLCIENSFMTASK
1480 1490 1500 1510
>>NP_569711 (OMIM: 120328,267750) collagen alpha-1(XVIII (1751 aa)
initn: 9496 init1: 9496 opt: 9496 Z-score: 3464.9 bits: 653.9 E(85289): 2.9e-186
Smith-Waterman score: 9496; 100.0% identity (100.0% similar) in 1301 aa overlap (36-1336:451-1751)
10 20 30 40 50 60
pF1KB7 PWPWPRRRRLLDVLAPLVLLLGVRAASAEPERISEEVGLLQLLGDPPPQQVTQTDDPDVG
::::::::::::::::::::::::::::::
NP_569 SRLGGGRLPVACASLPTQEDGYCVLIGPAAERISEEVGLLQLLGDPPPQQVTQTDDPDVG
430 440 450 460 470 480
70 80 90 100 110 120
pF1KB7 LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVLLGVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVLLGVKL
490 500 510 520 530 540
130 140 150 160 170 180
pF1KB7 SGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 SGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQR
550 560 570 580 590 600
190 200 210 220 230 240
pF1KB7 MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD
610 620 630 640 650 660
250 260 270 280 290 300
pF1KB7 GASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTV
670 680 690 700 710 720
310 320 330 340 350 360
pF1KB7 ASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 ASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGP
730 740 750 760 770 780
370 380 390 400 410 420
pF1KB7 PGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 PGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFP
790 800 810 820 830 840
430 440 450 460 470 480
pF1KB7 GTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG
850 860 870 880 890 900
490 500 510 520 530 540
pF1KB7 PRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 PRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGR
910 920 930 940 950 960
550 560 570 580 590 600
pF1KB7 EGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 EGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP
970 980 990 1000 1010 1020
610 620 630 640 650 660
pF1KB7 GLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFP
1030 1040 1050 1060 1070 1080
670 680 690 700 710 720
pF1KB7 GLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGSVLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGSVLSV
1090 1100 1110 1120 1130 1140
730 740 750 760 770 780
pF1KB7 PGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 PGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKG
1150 1160 1170 1180 1190 1200
790 800 810 820 830 840
pF1KB7 EPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 EPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP
1210 1220 1230 1240 1250 1260
850 860 870 880 890 900
pF1KB7 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLE
1270 1280 1290 1300 1310 1320
910 920 930 940 950 960
pF1KB7 AEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 AEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPG
1330 1340 1350 1360 1370 1380
970 980 990 1000 1010 1020
pF1KB7 PPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 PPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASS
1390 1400 1410 1420 1430 1440
1030 1040 1050 1060 1070 1080
pF1KB7 GVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 GVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVA
1450 1460 1470 1480 1490 1500
1090 1100 1110 1120 1130 1140
pF1KB7 ALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 ALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRP
1510 1520 1530 1540 1550 1560
1150 1160 1170 1180 1190 1200
pF1KB7 ARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 ARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSS
1570 1580 1590 1600 1610 1620
1210 1220 1230 1240 1250 1260
pF1KB7 RLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDVLRHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 RLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDVLRHP
1630 1640 1650 1660 1670 1680
1270 1280 1290 1300 1310 1320
pF1KB7 TWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAYIVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_569 TWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAYIVL
1690 1700 1710 1720 1730 1740
1330
pF1KB7 CIENSFMTASK
:::::::::::
NP_569 CIENSFMTASK
1750
>>NP_000081 (OMIM: 120180,130020,130050) collagen alpha- (1466 aa)
initn: 785 init1: 475 opt: 1946 Z-score: 728.6 bits: 147.3 E(85289): 7.6e-34
Smith-Waterman score: 2082; 41.7% identity (54.1% similar) in 917 aa overlap (183-1026:343-1198)
160 170 180 190 200 210
pF1KB7 FRLPAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEPGAGLFVAQAGGAD
: : :.. : ::.. .: :
NP_000 LPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPG
320 330 340 350 360 370
220 230 240 250 260 270
pF1KB7 PDKFQGVIAELKVRRDPQVSPMHCLDEEG-DDSDGASGDSG-SGLGDARELLREETGAAL
:. :. . : : : . : :..:. : .:. : :. .:
NP_000 PQGHAGA-------QGPPGPP-------GINGSPGGKGEMGPAGIPGAPGLM-----GAR
380 390 400 410
280 290 300 310 320 330
pF1KB7 KPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPG
: :.: .. : :.. : ... : . : .:: ... ::. .::
NP_000 GP--PGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPG
420 430 440 450 460 470
340 350 360 370 380
pF1KB7 GRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPG---LPCPVSPLGPAG-PALQTVP
. .:: : :: :.:: : ::: : : :: : : :..: : :: :. . ::
NP_000 -EPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVP
480 490 500 510 520 530
390 400 410 420 430 440
pF1KB7 GPQGPPGPPGRDGTPGRDGEPGDPGEDGK------PGDTGPQGFPGTPGDVGPKGDKGDP
: : : :: : :: ::.:: :: .:. :: .::.: ::. : ::::. : :
NP_000 GGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAP
540 550 560 570 580 590
450 460 470 480 490
pF1KB7 GV-GERGPPGPQGPPGPPGPSFRHDKLTFIDMEG-SGFGGDLEALRGP------RGFPGP
: :::: :: :: :::: .. . : .: ::: .. :: .:.::
NP_000 GKNGERGGPGGPGPQGPPG---KNGETGPQGPPGPTGPGGD-KGDTGPPGPQGLQGLPGT
600 610 620 630 640
500 510 520 530 540
pF1KB7 PGPPGVPGLPGEPGRFG-VNSSDVPGPAGLPGVPGREGPPGFPGLPG------PPGPPGR
:::: : ::::: : ... .:: : :.::..::::. : :: :::: :
NP_000 GGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGG
650 660 670 680 690 700
550 560 570 580 590
pF1KB7 EG---PPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGA---PGPAGPPGPPGP
.: ::: : :. : : ::..:. :.::: : .:: : :: :: :: :: ::
NP_000 KGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGP
710 720 730 740 750 760
600 610 620 630 640
pF1KB7 PGPPGP-GLPA-----GFDDMEGSGGPFWSTA-RSADGPQGP---PGLPGLKGDPGVPGL
::::: : :. : . : .:: : . :. :: :: :: :: .:.:: :
NP_000 IGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGE
770 780 790 800 810 820
650 660 670 680 690 700
pF1KB7 PGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGV-GQPGLPGPPG-
:: :: : : :: : :: : ::: ::.: .: :: : :: : : :::::::
NP_000 RGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGS
830 840 850 860 870 880
710 720 730 740 750 760
pF1KB7 -----PPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEK
:::: .:: ::: : : : :: .::::. :. ::.:::: .:
NP_000 NGNPGPPGPS-GSPGKDGP----PGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPP
890 900 910 920 930 940
770 780 790
pF1KB7 GEPG-----------SIFSPDG-----GALGPAQ-KGAKGEPGF------RGPPGPYGRP
: :: .. .: : :. :: :: .:.:: :::::: : :
NP_000 GAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLP
950 960 970 980 990 1000
800 810 820 830 840 850
pF1KB7 GYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSN
: : : ::: : :: .:: :. : :: . : : :: :: :: ::::: :: ..
NP_000 GLAGTAGEPGRDGNPGSDGLPGRDGSPGGKG-DRGENGSPGAPGAPGHPGPPG-PVGPAG
1010 1020 1030 1040 1050
860 870 880 890 900 910
pF1KB7 VFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDAG
.. .. :: : :. : ::: :..: :: :: :. ::: :.:: ::
NP_000 KSGDRGESGPAG-PA--GAPGPAGSRGAPGPQGPRGD------------KGETGERGAAG
1060 1070 1080 1090 1100
920 930 940 950 960 970
pF1KB7 QKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEG
::.:: ::. : :: ::: : .: : ::: : :: ::.:::: .:
NP_000 IKGHRGFPGNPG-----APGSPGPAGQQGAIGSPGPAGPR-----GPVGPSGPPG--KDG
1110 1120 1130 1140 1150
980 990 1000 1010 1020 1030
pF1KB7 RQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQ
.: ::: ::::: . : .: . . :: :: ::::::::. : :
NP_000 TSGHPGPIGPPGPRGNRG-ERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGE
1160 1170 1180 1190 1200 1210
1040 1050 1060 1070 1080 1090
pF1KB7 VHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNP
NP_000 KAGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPARNCRDLKFCHPE
1220 1230 1240 1250 1260 1270
>--
initn: 1376 init1: 373 opt: 688 Z-score: 272.6 bits: 62.9 E(85289): 1.9e-08
Smith-Waterman score: 768; 42.9% identity (52.9% similar) in 310 aa overlap (368-675:72-342)
340 350 360 370 380 390
pF1KB7 LKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQ-GPPGPPG
: :: .: : : . : : .: ::.
NP_000 RDVWKPEPCQICVCDSGSVLCDDIICDDQELDCP-NPEIPFGECCAVCPQPPTAPTRPPN
50 60 70 80 90 100
400 410 420 430 440 450
pF1KB7 RDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGP
.: : :.:: :: :. :: : : ::.::. :: ::. : : :::. .:
NP_000 GQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGP------PGICESCPTGPQNY-SP
110 120 130 140 150
460 470 480 490 500 510
pF1KB7 PGPSFRHDKLTFIDME-GSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDV
:. :.. : . :: : . :: : ::::::::. : :: :: : .
NP_000 QYDSY--------DVKSGVAVGG-LAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQ----
160 170 180 190 200
520 530 540 550 560 570
pF1KB7 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGP
:: : :: : :::: :: :: :: :..: :: :. : : : :: :: : ::
NP_000 -GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGF
210 220 230 240 250
580 590 600 610 620 630
pF1KB7 AGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPP
: .:. :. : : : : :: : : :: : .: : ::.::
NP_000 PGMKGHRGFDGRNGEKGETGAPGLKGENG--LP-------GENG--------APGPMGPR
260 270 280 290 300
640 650 660 670 680 690
pF1KB7 GLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKD
: :: .: ::.:: ::.:. :: : : :: :: : ::
NP_000 GAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSN
310 320 330 340 350 360
700 710 720 730 740 750
pF1KB7 GVGQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGS
NP_000 GAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGAN
370 380 390 400 410 420
>>XP_016869755 (OMIM: 120215,130000) PREDICTED: collagen (1715 aa)
initn: 899 init1: 486 opt: 1919 Z-score: 718.1 bits: 145.6 E(85289): 2.9e-33
Smith-Waterman score: 2091; 39.3% identity (52.3% similar) in 1048 aa overlap (246-1132:571-1577)
220 230 240 250 260 270
pF1KB7 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP
: : ::: : :. : : . :.
XP_016 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSG-G-----LKGEPGD-VGPQ--
550 560 570 580 590
280 290 300 310 320 330
pF1KB7 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVST---WDGSVRTPGGR
.: : :: .:. . .:. .: ::. .::. . . .:: . ::
XP_016 GPRGVQGPPGPAGKPGRRGRA---------GSDGARGMPGQTGPKGDRGFDGLAGLPG--
600 610 620 630 640
340 350 360 370 380
pF1KB7 VKEGGLKGQKGEPGVPGPPG---------RAGPPGSPCLPGPPGLPCPVSPLGPAGP---
: : .:. : : ::::: ..:: : : ::: :: : .: :: ::
XP_016 --EKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGV
650 660 670 680 690
390 400 410 420 430
pF1KB7 -ALQTVPGP------QGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGP
... ::: :: :::::..:.:: .: :: : : ::. :: : :: :: :
XP_016 TGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGA
700 710 720 730 740 750
440 450 460 470
pF1KB7 KGDKGDPGV----GERG---PPGPQGPPGPPGPSFRHDKLTFIDMEGS----------GF
: : :: ::.: ::::::: : ::: . . ..:. ::
XP_016 DGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGF
760 770 780 790 800 810
480 490 500 510 520
pF1KB7 GGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVP-GPAG---------LPGVPG
::. ...: :: ::::: : : : :: : :.. : :: : ::: ::
XP_016 KGDM-GIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG
820 830 840 850 860 870
530 540 550 560 570
pF1KB7 REGP------PGFPG---------LPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKG
:.:: ::::: :: ::: :..:: : :..: : .: :: ::..:
XP_016 RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSG
880 890 900 910 920 930
580 590 600 610 620
pF1KB7 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPG----PGLPA-----GFDDMEGSGGPFW
. :::: :: : : ::.: ::: ::::::: :: :. ::. : ::
XP_016 GDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG
940 950 960 970 980 990
630 640 650 660
pF1KB7 STA-------------RSADGPQGPPG---LPGL------KGDPGVPGLPGAKGEVGADG
.. :. :: :::: :::: ::::: :::: : : :
XP_016 VVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRG
1000 1010 1020 1030 1040 1050
670 680 690 700 710
pF1KB7 VPGFPGLPGR------EGIAGPQGPKGDRGSRGEKGDPGKDG-VGQPGLPGPPGPPGPVV
:: :::: .: :: :: : :: ::.: : : .: :: ::: :::::.
XP_016 FPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA-
1060 1070 1080 1090 1100 1110
720 730 740 750 760
pF1KB7 YVSEQDGSVLSVP-GPEGRPGF---AGFPGPAGP---------KGNLGSKGERGSPGPKG
.:. . . : :: :: :. .:.:::::: ::..: :..:: : ::
XP_016 --GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKG
1120 1130 1140 1150 1160 1170
770 780 790 800 810 820
pF1KB7 EKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLK
:.: :: .:.: :. .:: :::: :: : .:. : .: :::: :: :..::
XP_016 EQGPPGPT-GPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLP
1180 1190 1200 1210 1220 1230
830 840 850 860
pF1KB7 GEKGEPGDASLGFGMRGMPGPPGP------PGPPGPPGTP--VYDSNVFAESSRPGP---
: :: :... :. : :::::: :: :: : : . . .. .:...::
XP_016 GPPGEKGETG-DVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE
1240 1250 1260 1270 1280 1290
870 880 890 900
pF1KB7 PGLPGNQGPPGPKGAKGE---------VGPPGP------------PGQFPFDFLQLEAEM
:::::. ::::::: .:: .::::: :: :
XP_016 PGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGE
1300 1310 1320 1330 1340 1350
910 920 930 940 950 960
pF1KB7 KGEKGDRGDAGQKGERGEPGGGGFFG-SSLPGPPGPPGPRGYPGIPGPKG-ESIRGQPGP
: :. : :.::. :::: : : .. ::: :::: :: :: ::.: .. .: :
XP_016 PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGE
1360 1370 1380 1390 1400 1410
970 980 990 1000 1010 1020
pF1KB7 PGPQGPPG-IGYEGRQGPPGPPGPPGPPSFPGP-HRQTI-SVPGPPGPPGPPGPPGTMG-
: .:::: : : :: :: ::: : ..::: .: . . ::: ::::: :::: :
XP_016 AGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL
1420 1430 1440 1450 1460 1470
1030 1040 1050 1060 1070 1080
pF1KB7 -ASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTD
..:: . . ...: . : : :: : . . :. : . .:
XP_016 KGDSGPKGEKGHPGLIGLIG--PPG------EQGE---KGDRGLPGPQGSSGPKGEQGIT
1480 1490 1500 1510 1520
1090 1100 1110 1120 1130
pF1KB7 NEVAALQPPVVQLHDSNPYPR--REHPHPTARPWRADDILASPPRLPEP-----QPYPGA
. . . :: . : :. . ::. : ... .:: : : :: :
XP_016 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTG-P-KGEAGHPGPPGPPGPPGEVIQPLPIQ
1530 1540 1550 1560 1570
1140 1150 1160 1170 1180 1190
pF1KB7 PHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVG
XP_016 ASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTC
1580 1590 1600 1610 1620 1630
>>NP_001265003 (OMIM: 120215,130000) collagen alpha-1(V) (1838 aa)
initn: 899 init1: 486 opt: 1919 Z-score: 717.7 bits: 145.6 E(85289): 3.1e-33
Smith-Waterman score: 2091; 39.3% identity (52.3% similar) in 1048 aa overlap (246-1132:571-1577)
220 230 240 250 260 270
pF1KB7 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP
: : ::: : :. : : . :.
NP_001 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSG-G-----LKGEPGD-VGPQ--
550 560 570 580 590
280 290 300 310 320 330
pF1KB7 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVST---WDGSVRTPGGR
.: : :: .:. . .:. .: ::. .::. . . .:: . ::
NP_001 GPRGVQGPPGPAGKPGRRGRA---------GSDGARGMPGQTGPKGDRGFDGLAGLPG--
600 610 620 630 640
340 350 360 370 380
pF1KB7 VKEGGLKGQKGEPGVPGPPG---------RAGPPGSPCLPGPPGLPCPVSPLGPAGP---
: : .:. : : ::::: ..:: : : ::: :: : .: :: ::
NP_001 --EKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGV
650 660 670 680 690
390 400 410 420 430
pF1KB7 -ALQTVPGP------QGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGP
... ::: :: :::::..:.:: .: :: : : ::. :: : :: :: :
NP_001 TGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGA
700 710 720 730 740 750
440 450 460 470
pF1KB7 KGDKGDPGV----GERG---PPGPQGPPGPPGPSFRHDKLTFIDMEGS----------GF
: : :: ::.: ::::::: : ::: . . ..:. ::
NP_001 DGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGF
760 770 780 790 800 810
480 490 500 510 520
pF1KB7 GGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVP-GPAG---------LPGVPG
::. ...: :: ::::: : : : :: : :.. : :: : ::: ::
NP_001 KGDM-GIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG
820 830 840 850 860 870
530 540 550 560 570
pF1KB7 REGP------PGFPG---------LPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKG
:.:: ::::: :: ::: :..:: : :..: : .: :: ::..:
NP_001 RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSG
880 890 900 910 920 930
580 590 600 610 620
pF1KB7 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPG----PGLPA-----GFDDMEGSGGPFW
. :::: :: : : ::.: ::: ::::::: :: :. ::. : ::
NP_001 GDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG
940 950 960 970 980 990
630 640 650 660
pF1KB7 STA-------------RSADGPQGPPG---LPGL------KGDPGVPGLPGAKGEVGADG
.. :. :: :::: :::: ::::: :::: : : :
NP_001 VVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRG
1000 1010 1020 1030 1040 1050
670 680 690 700 710
pF1KB7 VPGFPGLPGR------EGIAGPQGPKGDRGSRGEKGDPGKDG-VGQPGLPGPPGPPGPVV
:: :::: .: :: :: : :: ::.: : : .: :: ::: :::::.
NP_001 FPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA-
1060 1070 1080 1090 1100 1110
720 730 740 750 760
pF1KB7 YVSEQDGSVLSVP-GPEGRPGF---AGFPGPAGP---------KGNLGSKGERGSPGPKG
.:. . . : :: :: :. .:.:::::: ::..: :..:: : ::
NP_001 --GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKG
1120 1130 1140 1150 1160 1170
770 780 790 800 810 820
pF1KB7 EKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLK
:.: :: .:.: :. .:: :::: :: : .:. : .: :::: :: :..::
NP_001 EQGPPGPT-GPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLP
1180 1190 1200 1210 1220 1230
830 840 850 860
pF1KB7 GEKGEPGDASLGFGMRGMPGPPGP------PGPPGPPGTP--VYDSNVFAESSRPGP---
: :: :... :. : :::::: :: :: : : . . .. .:...::
NP_001 GPPGEKGETG-DVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE
1240 1250 1260 1270 1280 1290
870 880 890 900
pF1KB7 PGLPGNQGPPGPKGAKGE---------VGPPGP------------PGQFPFDFLQLEAEM
:::::. ::::::: .:: .::::: :: :
NP_001 PGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGE
1300 1310 1320 1330 1340 1350
910 920 930 940 950 960
pF1KB7 KGEKGDRGDAGQKGERGEPGGGGFFG-SSLPGPPGPPGPRGYPGIPGPKG-ESIRGQPGP
: :. : :.::. :::: : : .. ::: :::: :: :: ::.: .. .: :
NP_001 PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGE
1360 1370 1380 1390 1400 1410
970 980 990 1000 1010 1020
pF1KB7 PGPQGPPG-IGYEGRQGPPGPPGPPGPPSFPGP-HRQTI-SVPGPPGPPGPPGPPGTMG-
: .:::: : : :: :: ::: : ..::: .: . . ::: ::::: :::: :
NP_001 AGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL
1420 1430 1440 1450 1460 1470
1030 1040 1050 1060 1070 1080
pF1KB7 -ASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTD
..:: . . ...: . : : :: : . . :. : . .:
NP_001 KGDSGPKGEKGHPGLIGLIG--PPG------EQGE---KGDRGLPGPQGSSGPKGEQGIT
1480 1490 1500 1510 1520
1090 1100 1110 1120 1130
pF1KB7 NEVAALQPPVVQLHDSNPYPR--REHPHPTARPWRADDILASPPRLPEP-----QPYPGA
. . . :: . : :. . ::. : ... .:: : : :: :
NP_001 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTG-P-KGEAGHPGPPGPPGPPGEVIQPLPIQ
1530 1540 1550 1560 1570
1140 1150 1160 1170 1180 1190
pF1KB7 PHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVG
NP_001 ASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTC
1580 1590 1600 1610 1620 1630
>>NP_000084 (OMIM: 120215,130000) collagen alpha-1(V) ch (1838 aa)
initn: 899 init1: 486 opt: 1919 Z-score: 717.7 bits: 145.6 E(85289): 3.1e-33
Smith-Waterman score: 2091; 39.3% identity (52.3% similar) in 1048 aa overlap (246-1132:571-1577)
220 230 240 250 260 270
pF1KB7 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP
: : ::: : :. : : . :.
NP_000 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSG-G-----LKGEPGD-VGPQ--
550 560 570 580 590
280 290 300 310 320 330
pF1KB7 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVST---WDGSVRTPGGR
.: : :: .:. . .:. .: ::. .::. . . .:: . ::
NP_000 GPRGVQGPPGPAGKPGRRGRA---------GSDGARGMPGQTGPKGDRGFDGLAGLPG--
600 610 620 630 640
340 350 360 370 380
pF1KB7 VKEGGLKGQKGEPGVPGPPG---------RAGPPGSPCLPGPPGLPCPVSPLGPAGP---
: : .:. : : ::::: ..:: : : ::: :: : .: :: ::
NP_000 --EKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGV
650 660 670 680 690
390 400 410 420 430
pF1KB7 -ALQTVPGP------QGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGP
... ::: :: :::::..:.:: .: :: : : ::. :: : :: :: :
NP_000 TGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGA
700 710 720 730 740 750
440 450 460 470
pF1KB7 KGDKGDPGV----GERG---PPGPQGPPGPPGPSFRHDKLTFIDMEGS----------GF
: : :: ::.: ::::::: : ::: . . ..:. ::
NP_000 DGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGF
760 770 780 790 800 810
480 490 500 510 520
pF1KB7 GGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVP-GPAG---------LPGVPG
::. ...: :: ::::: : : : :: : :.. : :: : ::: ::
NP_000 KGDM-GIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG
820 830 840 850 860 870
530 540 550 560 570
pF1KB7 REGP------PGFPG---------LPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKG
:.:: ::::: :: ::: :..:: : :..: : .: :: ::..:
NP_000 RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSG
880 890 900 910 920 930
580 590 600 610 620
pF1KB7 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPG----PGLPA-----GFDDMEGSGGPFW
. :::: :: : : ::.: ::: ::::::: :: :. ::. : ::
NP_000 GDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG
940 950 960 970 980 990
630 640 650 660
pF1KB7 STA-------------RSADGPQGPPG---LPGL------KGDPGVPGLPGAKGEVGADG
.. :. :: :::: :::: ::::: :::: : : :
NP_000 VVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRG
1000 1010 1020 1030 1040 1050
670 680 690 700 710
pF1KB7 VPGFPGLPGR------EGIAGPQGPKGDRGSRGEKGDPGKDG-VGQPGLPGPPGPPGPVV
:: :::: .: :: :: : :: ::.: : : .: :: ::: :::::.
NP_000 FPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA-
1060 1070 1080 1090 1100 1110
720 730 740 750 760
pF1KB7 YVSEQDGSVLSVP-GPEGRPGF---AGFPGPAGP---------KGNLGSKGERGSPGPKG
.:. . . : :: :: :. .:.:::::: ::..: :..:: : ::
NP_000 --GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKG
1120 1130 1140 1150 1160 1170
770 780 790 800 810 820
pF1KB7 EKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLK
:.: :: .:.: :. .:: :::: :: : .:. : .: :::: :: :..::
NP_000 EQGPPGPT-GPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLP
1180 1190 1200 1210 1220 1230
830 840 850 860
pF1KB7 GEKGEPGDASLGFGMRGMPGPPGP------PGPPGPPGTP--VYDSNVFAESSRPGP---
: :: :... :. : :::::: :: :: : : . . .. .:...::
NP_000 GPPGEKGETG-DVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE
1240 1250 1260 1270 1280 1290
870 880 890 900
pF1KB7 PGLPGNQGPPGPKGAKGE---------VGPPGP------------PGQFPFDFLQLEAEM
:::::. ::::::: .:: .::::: :: :
NP_000 PGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGE
1300 1310 1320 1330 1340 1350
910 920 930 940 950 960
pF1KB7 KGEKGDRGDAGQKGERGEPGGGGFFG-SSLPGPPGPPGPRGYPGIPGPKG-ESIRGQPGP
: :. : :.::. :::: : : .. ::: :::: :: :: ::.: .. .: :
NP_000 PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGE
1360 1370 1380 1390 1400 1410
970 980 990 1000 1010 1020
pF1KB7 PGPQGPPG-IGYEGRQGPPGPPGPPGPPSFPGP-HRQTI-SVPGPPGPPGPPGPPGTMG-
: .:::: : : :: :: ::: : ..::: .: . . ::: ::::: :::: :
NP_000 AGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL
1420 1430 1440 1450 1460 1470
1030 1040 1050 1060 1070 1080
pF1KB7 -ASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTD
..:: . . ...: . : : :: : . . :. : . .:
NP_000 KGDSGPKGEKGHPGLIGLIG--PPG------EQGE---KGDRGLPGPQGSSGPKGEQGIT
1480 1490 1500 1510 1520
1090 1100 1110 1120 1130
pF1KB7 NEVAALQPPVVQLHDSNPYPR--REHPHPTARPWRADDILASPPRLPEP-----QPYPGA
. . . :: . : :. . ::. : ... .:: : : :: :
NP_000 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTG-P-KGEAGHPGPPGPPGPPGEVIQPLPIQ
1530 1540 1550 1560 1570
1140 1150 1160 1170 1180 1190
pF1KB7 PHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVG
NP_000 ASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTC
1580 1590 1600 1610 1620 1630
>>XP_016884752 (OMIM: 301050,303630) PREDICTED: collagen (1136 aa)
initn: 3059 init1: 930 opt: 1895 Z-score: 711.4 bits: 143.7 E(85289): 6.9e-33
Smith-Waterman score: 2082; 41.1% identity (54.9% similar) in 947 aa overlap (301-1183:4-889)
280 290 300 310 320 330
pF1KB7 KPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPG
.. ..: :: ::: .. :: ::
XP_016 MKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG
10 20 30
340 350 360 370 380
pF1KB7 GRVKEGGL--KGQKG---EPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQT-
. . ::. ::..: .::.:: :: :: : : . :::: ::. : : : .
XP_016 PKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGF-GPPG---PVGEKGIQGVAGNPG
40 50 60 70 80
390 400 410 420 430 440
pF1KB7 VPGPQGPPGPPGRDGT-PGRDGEPGDPGEDGK---PGDTGPQGFPGTPGDVGPKGDKGDP
:: :: : ::. : ::. : ::.::.:: ::: : : :: :: : ::. : :
XP_016 QPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIP
90 100 110 120 130 140
450 460 470 480 490 500
pF1KB7 GVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPG
:.: :::::.: :: ::: : : : :. ::::::: ::
XP_016 GIGLPGPPGPKGFPGIPGPP--------------GAPGT----PGRIGLEGPPGPPGFPG
150 160 170 180 190
510 520 530 540 550 560
pF1KB7 LPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGE
:::: :.. . ::: :::: : :: : :.::::::::: : : : ::..:
XP_016 PKGEPG-FALPGP--PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGP
200 210 220 230 240
570 580 590 600 610
pF1KB7 AGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPG-PGLPAGFDDMEGSGG
: :: : : :: :..: : : ::: : :: : :: : :: : :.: . : :
XP_016 NGQPGPMGPPGLPG-IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLD-VPGPPG
250 260 270 280 290 300
620 630 640 650 660 670
pF1KB7 PFWSTA-RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPG---LPGREGIAG
: . .: :: :::: ::: : :. :.::.:::.: : :: :: .::: :.
XP_016 ERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV--
310 320 330 340 350 360
680 690 700 710 720 730
pF1KB7 PQGPKGDRGSRGEKGDPGKDGV-GQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGF
: : ::: : .:. : :: : :. : :: ::::::. : ..:. : .:.::.
XP_016 P-GLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPM------DPNLLGSKGEKGEPGL
370 380 390 400 410
740 750 760 770 780 790
pF1KB7 AGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGP--
:.:: .:::: : :. :.:: .:. : :: .: :. :.: : : ::..:
XP_016 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPP-GPKGNPGLPGQPGLIGPPGLKGTIG
420 430 440 450 460 470
800 810 820 830 840
pF1KB7 ----PGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPP
::: : : : : ::.:: ::. : ::.::.:: .:. :. :.::: : :: :
XP_016 DMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSI--GLPGLPGPKGEPGLP
480 490 500 510 520 530
850 860 870 880 890 900
pF1KB7 GPPGTP-----VYDSNVFAESSRPGP---PGLPGNQGPPGPKGAKGEVGPPGPPGQFPFD
: ::.: : : .. . . :: ::::: : ::: : :: :::: ::
XP_016 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG-----
540 550 560 570 580
910 920 930 940 950
pF1KB7 FLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSS----LPGPPG--PPGPRGYPGIPG
: : : : :. : ::.:.:: :. : . :: :: ::: : ::. :
XP_016 -LPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSG
590 600 610 620 630 640
960 970 980 990 1000
pF1KB7 PKGES----IRGQPGPPGPQGPPGI-GYEGRQGPPGPPGPPGP----PSF-PGPHRQTIS
::.. : :.:: :::.: ::. :. : :::::::: ::: :. :::. .
XP_016 QKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP-G
650 660 670 680 690 700
1010 1020 1030 1040
pF1KB7 VPGP------PGPPGPPGPPGTMGASSGVRLWATRQAMLG----QVHEVPEGWLI-----
::: ::: :::: ::. :. .: . . .. : . . : :
XP_016 RPGPTGFQGLPGPEGPPGLPGN-GGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRP
710 720 730 740 750 760
1050 1060 1070 1080 1090 1100
pF1KB7 -FVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHP
. . . . . :: .. . .: : ..: . . :: .: : :
XP_016 GLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPP-------GP-PGLPGPSG
770 780 790 800 810
1110 1120 1130 1140 1150 1160
pF1KB7 TARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVA-
. ..: :.:: .: : : .. : :. ::.::. :. : . ..
XP_016 QSIIIKGD---AGPPGIPGQPGLKGLPGPQGPQGL-PG-PTGPPGDPGRNGLPGFDGAGG
820 830 840 850 860 870
1170 1180 1190 1200 1210 1220
pF1KB7 -LNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVN
..: :. : :: :
XP_016 RKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTL
880 890 900 910 920 930
>>NP_203699 (OMIM: 301050,303630) collagen alpha-5(IV) c (1691 aa)
initn: 3059 init1: 930 opt: 1895 Z-score: 709.4 bits: 144.0 E(85289): 8.9e-33
Smith-Waterman score: 2110; 38.8% identity (53.2% similar) in 1063 aa overlap (229-1183:442-1444)
200 210 220 230 240 250
pF1KB7 PGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD-GASGDSG----S
:.. : . : : . :. ::.: .
NP_203 GPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQ
420 430 440 450 460 470
260 270 280 290 300 310
pF1KB7 GL-GDARELLREETGAALK--PRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGA
:. :: . . :.... : :. : . :: :: ... : . ... :
NP_203 GVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPP---GSLGFPGQKGEKGQAGATGPKGL
480 490 500 510 520
320 330 340 350 360
pF1KB7 QTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGE---PGVPGPPGRAGPPGS---PCLPG
.::. .. . :: :: . :.::.::: ::.:: :: : ::. : :::
NP_203 PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG
530 540 550 560 570 580
370 380 390
pF1KB7 P---------------------PGLPCPVSPLGPAG--P-------ALQTV---PGPQGP
: :::: ..:.:: : : ..: : :: :
NP_203 PKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGI
590 600 610 620 630 640
400 410 420 430 440
pF1KB7 PGPPGRDGT----PGRDGEPGDPGEDGK---PGDTGPQGFPGTPGDVGPKGDKGDPGVGE
::: : : ::. : ::.::.:: ::: : : :: :: : ::. : ::.:
NP_203 PGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGL
650 660 670 680 690 700
450 460 470 480 490 500
pF1KB7 RGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGE
:::::.: :: ::: . : : . :. ::::::: :: ::
NP_203 PGPPGPKGFPGIPGPP-----------GAPGTPGRI-------GLEGPPGPPGFPGPKGE
710 720 730 740 750
510 520 530 540 550 560
pF1KB7 PGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAP
:: :.. . ::: :::: : :: : :.::::::::: : : : ::..: : :
NP_203 PG-FALPGP--PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQP
760 770 780 790 800
570 580 590 600 610 620
pF1KB7 GHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPG-PGLPAGFDDMEGSGGPFWS
: : : :: :..: : : ::: : :: : :: : :: : :.: . : : :
NP_203 GPMGPPGLPG-IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLD-VPGPPGERGS
810 820 830 840 850 860
630 640 650 660 670
pF1KB7 TA-RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPG---LPGREGIAGPQGP
. .: :: :::: ::: : :. :.::.:::.: : :: :: .::: :. : :
NP_203 PGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV--P-GL
870 880 890 900 910 920
680 690 700 710 720 730
pF1KB7 KGDRGSRGEKGDPGKDGV-GQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFP
::: : .:. : :: : :. : :: ::::::. : ..:. : .:.::. :.:
NP_203 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPM------DPNLLGSKGEKGEPGLPGIP
930 940 950 960 970
740 750 760 770 780 790
pF1KB7 GPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGP------
: .:::: : :. :.:: .:. : :: .: :. :.: : : ::..:
NP_203 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPP-GPKGNPGLPGQPGLIGPPGLKGTIGDMGF
980 990 1000 1010 1020 1030
800 810 820 830 840 850
pF1KB7 PGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPG
::: : : : : ::.:: ::. : ::.::.:: .:. :. :.::: : :: :: ::
NP_203 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSI--GLPGLPGPKGEPGLPGYPG
1040 1050 1060 1070 1080 1090
860 870 880 890 900
pF1KB7 TP-----VYDSNVFAESSRPGP---PGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQL
.: : : .. . . :: ::::: : ::: : :: :::: :: :
NP_203 NPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG------LPG
1100 1110 1120 1130 1140
910 920 930 940 950
pF1KB7 EAEMKGEKGDRGDAGQKGERGEPGGGGFFGSS----LPGPPG--PPGPRGYPGIPGPKGE
: : : :. : ::.:.:: :. : . :: :: ::: : ::. : ::.
NP_203 EPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGD
1150 1160 1170 1180 1190 1200
960 970 980 990 1000
pF1KB7 S----IRGQPGPPGPQGPPGI-GYEGRQGPPGPPGPPGP----PSF-PGPHRQTISVPGP
. : :.:: :::.: ::. :. : :::::::: ::: :. :::. . :::
NP_203 GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP-GRPGP
1210 1220 1230 1240 1250 1260
1010 1020 1030 1040 1050
pF1KB7 ------PGPPGPPGPPGTMGASSGVRLWATRQAMLG----QVHEVPEGWLI------FVA
::: :::: ::. :. .: . . .. : . . : : . .
NP_203 TGFQGLPGPEGPPGLPGN-GGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNG
1270 1280 1290 1300 1310 1320
1060 1070 1080 1090 1100 1110
pF1KB7 EQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARP
. . . :: .. . .: : ..: . . :: .: : : .
NP_203 MKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPP-------GP-PGLPGPSGQSII
1330 1340 1350 1360 1370
1120 1130 1140 1150 1160 1170
pF1KB7 WRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVA--LNS
..: :.:: .: : : .. : :. ::.::. :. : . .. ..
NP_203 IKGD---AGPPGIPGQPGLKGLPGPQGPQGL-PG-PTGPPGDPGRNGLPGFDGAGGRKGD
1380 1390 1400 1410 1420 1430
1180 1190 1200 1210 1220 1230
pF1KB7 PLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDE
: :. : :: :
NP_203 PGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTLQVYE
1440 1450 1460 1470 1480 1490
>--
initn: 791 init1: 435 opt: 1108 Z-score: 424.1 bits: 91.2 E(85289): 6.9e-17
Smith-Waterman score: 1241; 43.8% identity (54.2% similar) in 504 aa overlap (501-992:19-439)
480 490 500 510 520
pF1KB7 MEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGP----AGLPGVPG
: :.:.. .. . :: .:. : :
NP_203 MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKG
10 20 30 40
530 540 550 560 570 580
pF1KB7 REGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAG
..: ::. : :: :: :: ::::: ::::. : : :: :: .: :: : : :: :
NP_203 ERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPG
50 60 70 80 90 100
590 600 610 620 630 640
pF1KB7 APGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPG-
:: : ::: : :: : :: : : .:: ::::.::.::.::
NP_203 MPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPG--------LQGPPGPPGIPGMKGEPGS
110 120 130 140 150 160
650 660 670 680 690 700
pF1KB7 --VPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLP
. .::: ::. : : ::. :::: :: :: :: : : :::
NP_203 IIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPG----------P-------PGLM
170 180 190 200
710 720 730 740 750 760
pF1KB7 GPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKG
::::::: .:::.: :. .: :: : ::. : .: : :: .:.
NP_203 GPPGPPG--------------LPGPKGNMGL-NFQGPKGEKGEQGLQGPPGPPGQISEQK
210 220 230 240
770 780 790 800 810 820
pF1KB7 EPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEK
.: .. ::: .: :: :::::: :: .: :: :: : .: :::.
NP_203 RPIDV---------EFQKGDQGLPGDRGPPGP---PGIRGP---PGPPG--GEKGEKGEQ
250 260 270 280 290
830 840 850 860 870 880
pF1KB7 GEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKG
:::: :: :: : : :: :: : : :: ::. : : ::
NP_203 GEPGK-------RGKPGKDGENGQPGIPGLP-------------GDPGYPGEPGRDGEKG
300 310 320 330
890 900 910 920 930 940
pF1KB7 AKGEVGPPGPPGQ-FPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPG
::..::::::: .: . ::. : : :.::::: :: : : ::::::
NP_203 QKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPG--LPGPPG
340 350 360 370 380
950 960 970 980 990
pF1KB7 PP--GPRGYPGIPGPKGESIRGQPGPPGPQ--GPPGIGYEGRQGPPGPPGPPGPPSFPGP
:: : ::.:: .:. .:. :::: . ::::. .:. : :: ::::::
NP_203 AAVMGPPGPPGFPGERGQ--KGDEGPPGISIPGPPGL--DGQPGAPGLPGPPGPAGPHIP
390 400 410 420 430 440
1000 1010 1020 1030 1040 1050
pF1KB7 HRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELY
NP_203 PSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPP
450 460 470 480 490 500
>>XP_011529151 (OMIM: 301050,303630) PREDICTED: collagen (1696 aa)
initn: 3059 init1: 930 opt: 1895 Z-score: 709.4 bits: 144.0 E(85289): 8.9e-33
Smith-Waterman score: 2110; 38.8% identity (53.2% similar) in 1063 aa overlap (229-1183:447-1449)
200 210 220 230 240 250
pF1KB7 PGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD-GASGDSG----S
:.. : . : : . :. ::.: .
XP_011 GPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQ
420 430 440 450 460 470
260 270 280 290 300 310
pF1KB7 GL-GDARELLREETGAALK--PRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGA
:. :: . . :.... : :. : . :: :: ... : . ... :
XP_011 GVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPP---GSLGFPGQKGEKGQAGATGPKGL
480 490 500 510 520 530
320 330 340 350 360
pF1KB7 QTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGE---PGVPGPPGRAGPPGS---PCLPG
.::. .. . :: :: . :.::.::: ::.:: :: : ::. : :::
XP_011 PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG
540 550 560 570 580 590
370 380 390
pF1KB7 P---------------------PGLPCPVSPLGPAG--P-------ALQTV---PGPQGP
: :::: ..:.:: : : ..: : :: :
XP_011 PKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGI
600 610 620 630 640 650
400 410 420 430 440
pF1KB7 PGPPGRDGT----PGRDGEPGDPGEDGK---PGDTGPQGFPGTPGDVGPKGDKGDPGVGE
::: : : ::. : ::.::.:: ::: : : :: :: : ::. : ::.:
XP_011 PGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGL
660 670 680 690 700 710
450 460 470 480 490 500
pF1KB7 RGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGE
:::::.: :: ::: . : : . :. ::::::: :: ::
XP_011 PGPPGPKGFPGIPGPP-----------GAPGTPGRI-------GLEGPPGPPGFPGPKGE
720 730 740 750
510 520 530 540 550 560
pF1KB7 PGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAP
:: :.. . ::: :::: : :: : :.::::::::: : : : ::..: : :
XP_011 PG-FALPGP--PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQP
760 770 780 790 800 810
570 580 590 600 610 620
pF1KB7 GHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPG-PGLPAGFDDMEGSGGPFWS
: : : :: :..: : : ::: : :: : :: : :: : :.: . : : :
XP_011 GPMGPPGLPG-IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLD-VPGPPGERGS
820 830 840 850 860
630 640 650 660 670
pF1KB7 TA-RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPG---LPGREGIAGPQGP
. .: :: :::: ::: : :. :.::.:::.: : :: :: .::: :. : :
XP_011 PGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV--P-GL
870 880 890 900 910 920
680 690 700 710 720 730
pF1KB7 KGDRGSRGEKGDPGKDGV-GQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFP
::: : .:. : :: : :. : :: ::::::. : ..:. : .:.::. :.:
XP_011 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPM------DPNLLGSKGEKGEPGLPGIP
930 940 950 960 970 980
740 750 760 770 780 790
pF1KB7 GPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGP------
: .:::: : :. :.:: .:. : :: .: :. :.: : : ::..:
XP_011 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPP-GPKGNPGLPGQPGLIGPPGLKGTIGDMGF
990 1000 1010 1020 1030
800 810 820 830 840 850
pF1KB7 PGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPG
::: : : : : ::.:: ::. : ::.::.:: .:. :. :.::: : :: :: ::
XP_011 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSI--GLPGLPGPKGEPGLPGYPG
1040 1050 1060 1070 1080 1090
860 870 880 890 900
pF1KB7 TP-----VYDSNVFAESSRPGP---PGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQL
.: : : .. . . :: ::::: : ::: : :: :::: :: :
XP_011 NPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG------LPG
1100 1110 1120 1130 1140 1150
910 920 930 940 950
pF1KB7 EAEMKGEKGDRGDAGQKGERGEPGGGGFFGSS----LPGPPG--PPGPRGYPGIPGPKGE
: : : :. : ::.:.:: :. : . :: :: ::: : ::. : ::.
XP_011 EPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGD
1160 1170 1180 1190 1200 1210
960 970 980 990 1000
pF1KB7 S----IRGQPGPPGPQGPPGI-GYEGRQGPPGPPGPPGP----PSF-PGPHRQTISVPGP
. : :.:: :::.: ::. :. : :::::::: ::: :. :::. . :::
XP_011 GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP-GRPGP
1220 1230 1240 1250 1260 1270
1010 1020 1030 1040 1050
pF1KB7 ------PGPPGPPGPPGTMGASSGVRLWATRQAMLG----QVHEVPEGWLI------FVA
::: :::: ::. :. .: . . .. : . . : : . .
XP_011 TGFQGLPGPEGPPGLPGN-GGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNG
1280 1290 1300 1310 1320
1060 1070 1080 1090 1100 1110
pF1KB7 EQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARP
. . . :: .. . .: : ..: . . :: .: : : .
XP_011 MKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPP-------GP-PGLPGPSGQSII
1330 1340 1350 1360 1370 1380
1120 1130 1140 1150 1160 1170
pF1KB7 WRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVA--LNS
..: :.:: .: : : .. : :. ::.::. :. : . .. ..
XP_011 IKGD---AGPPGIPGQPGLKGLPGPQGPQGL-PG-PTGPPGDPGRNGLPGFDGAGGRKGD
1390 1400 1410 1420 1430
1180 1190 1200 1210 1220 1230
pF1KB7 PLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDE
: :. : :: :
XP_011 PGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTLQVYE
1440 1450 1460 1470 1480 1490
>--
initn: 791 init1: 435 opt: 1108 Z-score: 424.1 bits: 91.2 E(85289): 7e-17
Smith-Waterman score: 1238; 44.4% identity (53.4% similar) in 496 aa overlap (505-992:39-444)
480 490 500 510 520 530
pF1KB7 GFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFP
:: . : . : : : :: :: ::.:
XP_011 ENRDWEGFCYSTSAYWKNLYDGLLACYGCSPGS-KCDCSGIKGEKGERGFPGLEGHPGLP
10 20 30 40 50 60
540 550 560 570 580 590
pF1KB7 GLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPP
:.::: ::::: ::::. : : :: :: .: :: : : :: : :: : :
XP_011 GFPGP------EGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAP
70 80 90 100 110 120
600 610 620 630 640 650
pF1KB7 GPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPG---VPGLPG
:: : :: : :: : : .:: ::::.::.::.:: . .:::
XP_011 GPQGIPGCNGTKGERGFPGSPGFPG--------LQGPPGPPGIPGMKGEPGSIIMSSLPG
130 140 150 160 170
660 670 680 690 700 710
pF1KB7 AKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGP
::. : : ::. :::: :: :: :: : : ::: :::::::
XP_011 PKGNPGYPGPPGIQGLPGPTGIPGPIGPPG----------P-------PGLMGPPGPPG-
180 190 200 210
720 730 740 750 760 770
pF1KB7 VVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSP
.:::.: :. .: :: : ::. : .: : :: .:. .: ..
XP_011 -------------LPGPKGNMGL-NFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDV---
220 230 240 250
780 790 800 810 820 830
pF1KB7 DGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASL
::: .: :: :::::: :: .: :: :: : .: :::.::::
XP_011 ------EFQKGDQGLPGDRGPPGP---PGIRGP---PGPPG--GEKGEKGEQGEPGK---
260 270 280 290 300
840 850 860 870 880 890
pF1KB7 GFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPP
:: :: : : :: :: : : :: ::. : : :: ::..:::
XP_011 ----RGKPGKDGENGQPGIPGLP-------------GDPGYPGEPGRDGEKGQKGDTGPP
310 320 330 340
900 910 920 930 940
pF1KB7 GPPGQ-FPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPP--GPRG
:::: .: . ::. : : :.::::: :: : : :::::: :: :
XP_011 GPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPG--LPGPPGAAVMGPPG
350 360 370 380 390 400
950 960 970 980 990 1000
pF1KB7 YPGIPGPKGESIRGQPGPPGPQ--GPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVP
::.:: .:. .:. :::: . ::::. .:. : :: ::::::
XP_011 PPGFPGERGQ--KGDEGPPGISIPGPPGL--DGQPGAPGLPGPPGPAGPHIPPSDEICEP
410 420 430 440 450
1010 1020 1030 1040 1050 1060
pF1KB7 GPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFR
XP_011 GPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQ
460 470 480 490 500 510
1336 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 20:46:35 2016 done: Sun Nov 6 20:46:38 2016
Total Scan time: 21.670 Total Display time: 0.560
Function used was FASTA [36.3.4 Apr, 2011]